Protein–RNA interactions for Protein: Q61290

Cacna1e, Voltage-dependent R-type calcium channel subunit alpha-1E, mousemouse

Predictions only

Length 2,272 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cacna1eQ61290 Gm9368-201ENSMUST00000219348 831 ntBASIC13.27□□□□□ -0.28
Cacna1eQ61290 Isoc2b-201ENSMUST00000064547 1080 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Cacna1eQ61290 F3-201ENSMUST00000029771 1872 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Cacna1eQ61290 Fam160a2-204ENSMUST00000122327 3521 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.29
Cacna1eQ61290 Popdc2-201ENSMUST00000023494 2169 ntAPPRIS P4 TSL 1 (best) BASIC13.27□□□□□ -0.29
Cacna1eQ61290 Plekhb1-203ENSMUST00000107044 1806 ntAPPRIS ALT1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Cacna1eQ61290 Gm15889-202ENSMUST00000212669 2443 ntBASIC13.27□□□□□ -0.29
Cacna1eQ61290 Mapk8ip3-205ENSMUST00000119115 4173 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Cacna1eQ61290 Gm3756-201ENSMUST00000169182 1355 ntBASIC13.27□□□□□ -0.29
Cacna1eQ61290 Wdr53-201ENSMUST00000023474 1394 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Cacna1eQ61290 Rbm15-201ENSMUST00000061772 4343 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Cacna1eQ61290 Ecm1-202ENSMUST00000117507 1900 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.29
Cacna1eQ61290 Dlx5-202ENSMUST00000142635 1324 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Cacna1eQ61290 Cdk2-202ENSMUST00000026416 2406 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Cacna1eQ61290 Lrguk-202ENSMUST00000101564 967 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Cacna1eQ61290 Snord83b-201ENSMUST00000104546 94 ntBASIC13.27□□□□□ -0.29
Cacna1eQ61290 4930524O07Rik-201ENSMUST00000161822 1050 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Cacna1eQ61290 AC122305.4-201ENSMUST00000216159 1206 ntBASIC13.27□□□□□ -0.29
Cacna1eQ61290 Rlbp1-201ENSMUST00000053718 2134 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Cacna1eQ61290 4930442H23Rik-201ENSMUST00000056086 1245 ntAPPRIS P1 BASIC13.27□□□□□ -0.29
Cacna1eQ61290 Trim32-201ENSMUST00000050850 3194 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Cacna1eQ61290 Slc8a3-203ENSMUST00000182208 3433 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
Cacna1eQ61290 Ankrd34b-203ENSMUST00000168871 3397 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Cacna1eQ61290 Adgrb2-201ENSMUST00000030571 4734 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
Cacna1eQ61290 Pacrg-201ENSMUST00000041463 1475 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Cacna1eQ61290 Gm8108-202ENSMUST00000170207 1961 ntAPPRIS P5 TSL 5 BASIC13.26□□□□□ -0.29
Cacna1eQ61290 Grtp1-206ENSMUST00000210317 3013 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Cacna1eQ61290 Hsd17b11-202ENSMUST00000119025 2234 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Cacna1eQ61290 Gm44207-201ENSMUST00000204568 1424 ntBASIC13.26□□□□□ -0.29
Cacna1eQ61290 Rwdd4a-201ENSMUST00000033973 2921 ntAPPRIS P1 TSL 2 BASIC13.26□□□□□ -0.29
Cacna1eQ61290 Gulp1-203ENSMUST00000160854 1399 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Cacna1eQ61290 Cyp11a1-201ENSMUST00000034874 2120 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Cacna1eQ61290 Dgki-202ENSMUST00000090314 3784 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
Cacna1eQ61290 Gm42872-201ENSMUST00000200026 1967 ntBASIC13.26□□□□□ -0.29
Cacna1eQ61290 A430005L14Rik-202ENSMUST00000105645 977 ntTSL 3 BASIC13.26□□□□□ -0.29
Cacna1eQ61290 Gm6447-201ENSMUST00000118905 835 ntBASIC13.26□□□□□ -0.29
Cacna1eQ61290 Gm11591-201ENSMUST00000120063 702 ntBASIC13.26□□□□□ -0.29
Cacna1eQ61290 Bcas1os1-201ENSMUST00000133586 1239 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Cacna1eQ61290 AI480526-203ENSMUST00000160099 1017 ntTSL 2 BASIC13.26□□□□□ -0.29
Cacna1eQ61290 Chfr-212ENSMUST00000200038 606 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Cacna1eQ61290 Gm32926-201ENSMUST00000214043 681 ntTSL 3 BASIC13.26□□□□□ -0.29
Cacna1eQ61290 Tada3-202ENSMUST00000043333 1708 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Cacna1eQ61290 4933424N20Rik-201ENSMUST00000200749 1463 ntBASIC13.26□□□□□ -0.29
Cacna1eQ61290 Mark2-201ENSMUST00000025921 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Cacna1eQ61290 Tlr2-201ENSMUST00000029623 3014 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Cacna1eQ61290 Dnmt3l-208ENSMUST00000151242 1657 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Cacna1eQ61290 Ces1h-201ENSMUST00000145041 1870 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
Cacna1eQ61290 2610507I01Rik-201ENSMUST00000154354 1360 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Cacna1eQ61290 Trmt10c-201ENSMUST00000059052 3002 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Cacna1eQ61290 Rundc1-201ENSMUST00000040561 3223 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Cacna1eQ61290 Gm10676-201ENSMUST00000098778 3221 ntBASIC13.26□□□□□ -0.29
Cacna1eQ61290 Snrk-201ENSMUST00000118886 4811 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Cacna1eQ61290 Grik5-201ENSMUST00000003468 3763 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Cacna1eQ61290 7420426K07Rik-201ENSMUST00000098460 1504 ntAPPRIS P1 BASIC13.26□□□□□ -0.29
Cacna1eQ61290 Casc4-203ENSMUST00000089915 3475 ntTSL 2 BASIC13.25□□□□□ -0.29
Cacna1eQ61290 Hoxb9-202ENSMUST00000174042 2269 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Cacna1eQ61290 Pnck-203ENSMUST00000114473 1492 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Cacna1eQ61290 Gm5637-201ENSMUST00000153890 1119 ntBASIC13.25□□□□□ -0.29
Cacna1eQ61290 Ddit3-201ENSMUST00000026475 890 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Cacna1eQ61290 Fbxw7-201ENSMUST00000029727 2221 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
Cacna1eQ61290 E2f3-203ENSMUST00000221536 4597 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Cacna1eQ61290 E2f3-204ENSMUST00000222730 4579 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Cacna1eQ61290 Wdr5-201ENSMUST00000113952 2890 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Cacna1eQ61290 Ino80-202ENSMUST00000110808 3928 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Cacna1eQ61290 Prss8-202ENSMUST00000206124 1709 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Cacna1eQ61290 Src-202ENSMUST00000092576 3887 ntTSL 5 BASIC13.25□□□□□ -0.29
Cacna1eQ61290 Mrm3-201ENSMUST00000040577 1510 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Cacna1eQ61290 Celf5-201ENSMUST00000118763 4391 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
Cacna1eQ61290 Stx4a-202ENSMUST00000121705 1316 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Cacna1eQ61290 Mindy3-201ENSMUST00000028105 2344 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Cacna1eQ61290 2010001A14Rik-203ENSMUST00000152790 714 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Cacna1eQ61290 Mad2l1bp-201ENSMUST00000171172 1269 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Cacna1eQ61290 AC134335.2-201ENSMUST00000227660 440 ntBASIC13.25□□□□□ -0.29
Cacna1eQ61290 Acyp1-202ENSMUST00000065913 448 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Cacna1eQ61290 Gm3695-201ENSMUST00000087222 1009 ntBASIC13.25□□□□□ -0.29
Cacna1eQ61290 Cadm2-203ENSMUST00000120898 2768 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Cacna1eQ61290 Mus81-202ENSMUST00000124334 2067 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Cacna1eQ61290 Miga1-204ENSMUST00000199334 4024 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Cacna1eQ61290 Mfap4-202ENSMUST00000064783 1722 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
Cacna1eQ61290 Grid2ip-202ENSMUST00000110733 3825 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Cacna1eQ61290 Tmem184a-201ENSMUST00000044002 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Cacna1eQ61290 H2-T22-201ENSMUST00000058801 1534 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Cacna1eQ61290 Leng9-201ENSMUST00000058358 2460 ntAPPRIS P1 BASIC13.25□□□□□ -0.29
Cacna1eQ61290 Commd1-201ENSMUST00000057843 1459 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Cacna1eQ61290 Mapk8ip3-208ENSMUST00000121787 5431 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Cacna1eQ61290 Cox4i2-201ENSMUST00000010020 727 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Cacna1eQ61290 Itk-202ENSMUST00000101306 1185 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Cacna1eQ61290 Pole-203ENSMUST00000112482 747 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Cacna1eQ61290 Gm11964-201ENSMUST00000120982 444 ntBASIC13.24□□□□□ -0.29
Cacna1eQ61290 Gm829-202ENSMUST00000146622 722 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Cacna1eQ61290 Cox16-206ENSMUST00000168463 431 ntTSL 2 BASIC13.24□□□□□ -0.29
Cacna1eQ61290 1700015O11Rik-201ENSMUST00000180964 678 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Cacna1eQ61290 Gm5896-201ENSMUST00000189662 1024 ntBASIC13.24□□□□□ -0.29
Cacna1eQ61290 Gm18056-201ENSMUST00000207670 568 ntBASIC13.24□□□□□ -0.29
Cacna1eQ61290 Gm18061-201ENSMUST00000208350 562 ntBASIC13.24□□□□□ -0.29
Cacna1eQ61290 Gm18063-201ENSMUST00000208529 568 ntBASIC13.24□□□□□ -0.29
Cacna1eQ61290 Gm18052-201ENSMUST00000208750 559 ntBASIC13.24□□□□□ -0.29
Cacna1eQ61290 1700007G11Rik-201ENSMUST00000080333 861 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Cacna1eQ61290 Olfr12-201ENSMUST00000081274 1121 ntAPPRIS P1 BASIC13.24□□□□□ -0.29
Cacna1eQ61290 Zfp354c-201ENSMUST00000000632 1683 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 62.9 ms