Protein–RNA interactions for Protein: Q60847

Col12a1, Collagen alpha-1(XII) chain, mousemouse

Predictions only

Length 3,120 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col12a1Q60847 Camk2d-221ENSMUST00000171289 2217 ntTSL 5 BASIC13.13□□□□□ -0.31
Col12a1Q60847 Slc39a8-201ENSMUST00000029810 3203 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Col12a1Q60847 Hnrnpul1-205ENSMUST00000206832 3784 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Col12a1Q60847 Mfn1-201ENSMUST00000091257 4562 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Col12a1Q60847 Fam129a-203ENSMUST00000111875 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Col12a1Q60847 F12-202ENSMUST00000170921 478 ntTSL 3 BASIC13.13□□□□□ -0.31
Col12a1Q60847 Gm2546-201ENSMUST00000182630 991 ntBASIC13.13□□□□□ -0.31
Col12a1Q60847 Gm4691-202ENSMUST00000182989 885 ntTSL 5 BASIC13.13□□□□□ -0.31
Col12a1Q60847 Gm45460-201ENSMUST00000211385 1038 ntTSL 5 BASIC13.13□□□□□ -0.31
Col12a1Q60847 Pym1-203ENSMUST00000218218 1143 ntTSL 3 BASIC13.13□□□□□ -0.31
Col12a1Q60847 4930564D02Rik-201ENSMUST00000070584 737 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Col12a1Q60847 Xrra1-202ENSMUST00000207855 1334 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
Col12a1Q60847 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC13.13□□□□□ -0.31
Col12a1Q60847 Agap1-204ENSMUST00000190096 4078 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Col12a1Q60847 Slc27a4-201ENSMUST00000080065 4054 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Col12a1Q60847 Pak1-205ENSMUST00000206984 2794 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
Col12a1Q60847 Bnc2-215ENSMUST00000176691 3385 ntAPPRIS P2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Col12a1Q60847 Gm4864-201ENSMUST00000219894 1461 ntBASIC13.13□□□□□ -0.31
Col12a1Q60847 Gdf9-201ENSMUST00000018382 1793 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Col12a1Q60847 Cpeb3-208ENSMUST00000132580 3148 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
Col12a1Q60847 Ighv5-2-201ENSMUST00000103442 350 ntAPPRIS ALT2 BASIC13.13□□□□□ -0.31
Col12a1Q60847 Gm15440-201ENSMUST00000110042 1231 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
Col12a1Q60847 Gm29155-201ENSMUST00000185910 269 ntBASIC13.13□□□□□ -0.31
Col12a1Q60847 Rprl1-202ENSMUST00000198476 238 ntBASIC13.13□□□□□ -0.31
Col12a1Q60847 Gm44651-201ENSMUST00000207343 372 ntBASIC13.13□□□□□ -0.31
Col12a1Q60847 Olfr368-201ENSMUST00000053990 985 ntAPPRIS P1 BASIC13.13□□□□□ -0.31
Col12a1Q60847 Rpl34-202ENSMUST00000079085 480 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Col12a1Q60847 Olfr1423-201ENSMUST00000087831 933 ntAPPRIS P1 BASIC13.13□□□□□ -0.31
Col12a1Q60847 Nphs1os-201ENSMUST00000152625 1339 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Col12a1Q60847 1700029J07Rik-201ENSMUST00000095323 2740 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Col12a1Q60847 Smyd5-201ENSMUST00000045693 2486 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Col12a1Q60847 Abhd6-201ENSMUST00000026313 1401 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Col12a1Q60847 Crx-203ENSMUST00000172758 1469 ntTSL 3 BASIC13.12□□□□□ -0.31
Col12a1Q60847 Psmd1-201ENSMUST00000027432 3112 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Col12a1Q60847 Emilin3-201ENSMUST00000057169 3547 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
Col12a1Q60847 App-203ENSMUST00000226801 3299 ntAPPRIS ALT2 BASIC13.12□□□□□ -0.31
Col12a1Q60847 Reep5-201ENSMUST00000006027 2894 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Col12a1Q60847 Olfr288-202ENSMUST00000165379 2083 ntAPPRIS P1 TSL 2 BASIC13.12□□□□□ -0.31
Col12a1Q60847 Cdc26-202ENSMUST00000107459 654 ntAPPRIS P1 TSL 2 BASIC13.12□□□□□ -0.31
Col12a1Q60847 Ip6k2-202ENSMUST00000192028 1199 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Col12a1Q60847 E230034D01Rik-201ENSMUST00000214440 1212 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Col12a1Q60847 N6amt1-203ENSMUST00000118310 1700 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Col12a1Q60847 Jun-201ENSMUST00000107094 3189 ntAPPRIS P1 BASIC13.12□□□□□ -0.31
Col12a1Q60847 Slc41a3-201ENSMUST00000032177 2324 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Col12a1Q60847 Pcnx2-204ENSMUST00000131127 3782 ntTSL 5 BASIC13.12□□□□□ -0.31
Col12a1Q60847 Stk38-202ENSMUST00000119274 1939 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Col12a1Q60847 Dbn1-203ENSMUST00000109923 2940 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
Col12a1Q60847 Nos1ap-202ENSMUST00000160456 3022 ntAPPRIS P2 TSL 5 BASIC13.12□□□□□ -0.31
Col12a1Q60847 Gm36745-201ENSMUST00000213455 1594 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Col12a1Q60847 Msi2-201ENSMUST00000092794 1855 ntAPPRIS P2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Col12a1Q60847 Eif5a-206ENSMUST00000108609 849 ntAPPRIS P1 TSL 3 BASIC13.12□□□□□ -0.31
Col12a1Q60847 Gm1667-201ENSMUST00000151651 558 ntTSL 3 BASIC13.12□□□□□ -0.31
Col12a1Q60847 Gm38304-201ENSMUST00000161826 600 ntTSL 3 BASIC13.12□□□□□ -0.31
Col12a1Q60847 Gm17040-202ENSMUST00000170597 889 ntBASIC13.12□□□□□ -0.31
Col12a1Q60847 Polr2i-201ENSMUST00000019882 819 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Col12a1Q60847 Tmem247-201ENSMUST00000042172 752 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Col12a1Q60847 Asb8-201ENSMUST00000059112 1049 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Col12a1Q60847 Apc-201ENSMUST00000066133 1185 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Col12a1Q60847 Top1mt-201ENSMUST00000000958 1903 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Col12a1Q60847 Ttl-201ENSMUST00000035812 4567 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Col12a1Q60847 Jmjd8-201ENSMUST00000026832 2091 ntAPPRIS P2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Col12a1Q60847 Gm37165-201ENSMUST00000193815 1463 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Col12a1Q60847 Gm37728-201ENSMUST00000195025 2292 ntBASIC13.12□□□□□ -0.31
Col12a1Q60847 Acot6-201ENSMUST00000056822 3388 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Col12a1Q60847 Gm26534-201ENSMUST00000181687 1724 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Col12a1Q60847 Keap1-202ENSMUST00000164812 3614 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Col12a1Q60847 Phldb1-211ENSMUST00000135436 2844 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Col12a1Q60847 Gm14396-201ENSMUST00000126966 548 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Col12a1Q60847 Gm16195-201ENSMUST00000130607 442 ntTSL 2 BASIC13.11□□□□□ -0.31
Col12a1Q60847 Cabp2-202ENSMUST00000159556 781 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Col12a1Q60847 Krtap20-2-201ENSMUST00000169954 528 ntAPPRIS P1 BASIC13.11□□□□□ -0.31
Col12a1Q60847 Vmn1r213-201ENSMUST00000076897 1155 ntAPPRIS P2 BASIC13.11□□□□□ -0.31
Col12a1Q60847 Ggt7-201ENSMUST00000029131 2614 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Col12a1Q60847 Islr2-203ENSMUST00000163897 4303 ntAPPRIS P3 TSL 2 BASIC13.11□□□□□ -0.31
Col12a1Q60847 Fam163b-201ENSMUST00000151224 2959 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Col12a1Q60847 Gpt-201ENSMUST00000023203 1749 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Col12a1Q60847 Gm45779-201ENSMUST00000212189 4064 ntBASIC13.11□□□□□ -0.31
Col12a1Q60847 Gm6583-201ENSMUST00000051117 2233 ntAPPRIS P1 BASIC13.11□□□□□ -0.31
Col12a1Q60847 Elp4-202ENSMUST00000122965 3048 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Col12a1Q60847 Rabep2-202ENSMUST00000106407 2234 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Col12a1Q60847 Rad54b-203ENSMUST00000108306 652 ntTSL 3 BASIC13.11□□□□□ -0.31
Col12a1Q60847 Srsf5-202ENSMUST00000110351 1498 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Col12a1Q60847 Tpm1-209ENSMUST00000113690 2890 ntTSL 3 BASIC13.11□□□□□ -0.31
Col12a1Q60847 4930538E20Rik-202ENSMUST00000146717 497 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Col12a1Q60847 Fhit-206ENSMUST00000162278 981 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Col12a1Q60847 Pcgf1-207ENSMUST00000177177 854 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Col12a1Q60847 Gm19166-201ENSMUST00000196041 1063 ntBASIC13.11□□□□□ -0.31
Col12a1Q60847 Gm43205-201ENSMUST00000198622 1968 ntBASIC13.11□□□□□ -0.31
Col12a1Q60847 Rpl17-ps3-201ENSMUST00000221295 556 ntBASIC13.11□□□□□ -0.31
Col12a1Q60847 Aqp11-205ENSMUST00000206389 3737 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Col12a1Q60847 Olfr56-204ENSMUST00000203149 1808 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Col12a1Q60847 Gm11924-201ENSMUST00000152306 1750 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Col12a1Q60847 Tmem185b-202ENSMUST00000183952 2824 ntAPPRIS P1 BASIC13.11□□□□□ -0.31
Col12a1Q60847 Gm12380-201ENSMUST00000119012 544 ntBASIC13.11□□□□□ -0.31
Col12a1Q60847 Gm11978-201ENSMUST00000122315 466 ntBASIC13.11□□□□□ -0.31
Col12a1Q60847 Gm17208-201ENSMUST00000168388 535 ntBASIC13.11□□□□□ -0.31
Col12a1Q60847 AC122305.4-201ENSMUST00000216159 1206 ntBASIC13.11□□□□□ -0.31
Col12a1Q60847 Rhbdl3-201ENSMUST00000017836 3736 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Col12a1Q60847 Rbmx-203ENSMUST00000114730 2019 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
Col12a1Q60847 Ndst2-202ENSMUST00000223679 3907 ntAPPRIS P1 BASIC13.1□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 79.9 ms