Protein–RNA interactions for Protein: Q5SPW0

Vps54, Vacuolar protein sorting-associated protein 54, mousemouse

Predictions only

Length 977 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps54Q5SPW0 Sipa1-202ENSMUST00000080824 3837 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Vps54Q5SPW0 Pou2f2-209ENSMUST00000175774 7047 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Vps54Q5SPW0 Rhog-202ENSMUST00000106923 1321 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
Vps54Q5SPW0 Slc25a18-201ENSMUST00000112682 1911 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Vps54Q5SPW0 Kir3dl1-202ENSMUST00000113105 1544 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Vps54Q5SPW0 Gm13886-201ENSMUST00000117876 1183 ntBASIC16.32■□□□□ 0.2
Vps54Q5SPW0 Cct3-ps1-201ENSMUST00000118023 1647 ntBASIC16.32■□□□□ 0.2
Vps54Q5SPW0 Gm10863-205ENSMUST00000148028 905 ntTSL 3 BASIC16.32■□□□□ 0.2
Vps54Q5SPW0 Far2os1-201ENSMUST00000162391 555 ntTSL 2 BASIC16.32■□□□□ 0.2
Vps54Q5SPW0 Runx2-213ENSMUST00000162878 2987 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Vps54Q5SPW0 Tbx6-202ENSMUST00000172352 1529 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Vps54Q5SPW0 Fam57b-203ENSMUST00000205324 1915 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Vps54Q5SPW0 Dmtn-201ENSMUST00000022694 5418 ntAPPRIS ALT1 TSL 5 BASIC16.32■□□□□ 0.2
Vps54Q5SPW0 AC139350.1-201ENSMUST00000227064 1594 ntBASIC16.32■□□□□ 0.2
Vps54Q5SPW0 Atg16l1-201ENSMUST00000027512 3130 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
Vps54Q5SPW0 Il6ra-201ENSMUST00000029559 3343 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
Vps54Q5SPW0 Txn1-201ENSMUST00000030051 1051 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Vps54Q5SPW0 Pgm2-201ENSMUST00000058351 2371 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Vps54Q5SPW0 Unc119b-201ENSMUST00000060798 3659 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Vps54Q5SPW0 Cln3-203ENSMUST00000098036 1571 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Vps54Q5SPW0 Rap1gap-203ENSMUST00000105835 4140 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
Vps54Q5SPW0 Pik3c2b-201ENSMUST00000077730 7928 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
Vps54Q5SPW0 Rasgef1b-209ENSMUST00000168092 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Vps54Q5SPW0 Rasgef1b-201ENSMUST00000031276 2990 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
Vps54Q5SPW0 Kpna4-201ENSMUST00000029353 8819 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Vps54Q5SPW0 St6gal2-202ENSMUST00000086878 2606 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Vps54Q5SPW0 Skida1-202ENSMUST00000091420 4376 ntAPPRIS P2 TSL 5 BASIC16.31■□□□□ 0.2
Vps54Q5SPW0 Miga2-208ENSMUST00000140075 2196 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Vps54Q5SPW0 Kif7-204ENSMUST00000184137 4093 ntAPPRIS P3 TSL 5 BASIC16.31■□□□□ 0.2
Vps54Q5SPW0 B3gat1-206ENSMUST00000161431 3858 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
Vps54Q5SPW0 Cyb561d1-202ENSMUST00000106654 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Vps54Q5SPW0 Gm7899-201ENSMUST00000192935 1897 ntBASIC16.31■□□□□ 0.2
Vps54Q5SPW0 Xlr-202ENSMUST00000067782 1860 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Vps54Q5SPW0 Axdnd1-204ENSMUST00000178036 3586 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
Vps54Q5SPW0 Tfap2a-201ENSMUST00000021787 3487 ntAPPRIS ALT1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Vps54Q5SPW0 Ush1g-201ENSMUST00000103037 3306 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Vps54Q5SPW0 Dnase1l1-201ENSMUST00000019232 1625 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Vps54Q5SPW0 Zbtb25-205ENSMUST00000176509 1591 ntTSL 2 BASIC16.31■□□□□ 0.2
Vps54Q5SPW0 Rapsn-202ENSMUST00000111445 1450 ntTSL 5 BASIC16.31■□□□□ 0.2
Vps54Q5SPW0 Cyp2u1-201ENSMUST00000106337 4378 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Vps54Q5SPW0 Rtp3-201ENSMUST00000084922 1425 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
Vps54Q5SPW0 Kcnh2-201ENSMUST00000036092 4221 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Vps54Q5SPW0 Pdcd6-203ENSMUST00000222759 1376 ntAPPRIS ALT1 TSL 2 BASIC16.31■□□□□ 0.2
Vps54Q5SPW0 Gm11478-201ENSMUST00000117851 599 ntBASIC16.31■□□□□ 0.2
Vps54Q5SPW0 Gm15806-201ENSMUST00000120696 955 ntBASIC16.31■□□□□ 0.2
Vps54Q5SPW0 Rpl17-ps5-201ENSMUST00000121001 555 ntBASIC16.31■□□□□ 0.2
Vps54Q5SPW0 St6galnac6-209ENSMUST00000131229 1013 ntTSL 2 BASIC16.31■□□□□ 0.2
Vps54Q5SPW0 Gm5035-201ENSMUST00000215581 927 ntBASIC16.31■□□□□ 0.2
Vps54Q5SPW0 Rpl13a-ps1-201ENSMUST00000071866 612 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
Vps54Q5SPW0 Olfr718-ps1-203ENSMUST00000215102 4913 ntAPPRIS P5 TSL 5 BASIC16.31■□□□□ 0.2
Vps54Q5SPW0 Kdm7a-201ENSMUST00000002305 9566 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Vps54Q5SPW0 Ablim2-201ENSMUST00000054598 3564 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
Vps54Q5SPW0 Kif7-203ENSMUST00000183846 4577 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
Vps54Q5SPW0 Dlx6-202ENSMUST00000160937 2216 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Vps54Q5SPW0 Litaf-201ENSMUST00000023143 2235 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Vps54Q5SPW0 Rest-202ENSMUST00000113449 6924 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Vps54Q5SPW0 Gins2-201ENSMUST00000034278 3900 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Vps54Q5SPW0 Itgb1-201ENSMUST00000090006 3815 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Vps54Q5SPW0 Add3-202ENSMUST00000050096 4488 ntAPPRIS ALT1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Vps54Q5SPW0 Sufu-203ENSMUST00000118440 2663 ntTSL 5 BASIC16.31■□□□□ 0.2
Vps54Q5SPW0 Kcng1-202ENSMUST00000109191 4089 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
Vps54Q5SPW0 Mmp2-201ENSMUST00000034187 3078 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Vps54Q5SPW0 Psmd2-201ENSMUST00000007212 2961 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Vps54Q5SPW0 Cant1-203ENSMUST00000106287 1476 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Vps54Q5SPW0 Paqr8-202ENSMUST00000167119 1472 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Vps54Q5SPW0 Mib2-201ENSMUST00000103176 3642 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Vps54Q5SPW0 4933435G04Rik-201ENSMUST00000205892 2108 ntBASIC16.3■□□□□ 0.2
Vps54Q5SPW0 Fgfr3-210ENSMUST00000169212 4245 ntAPPRIS P4 TSL 1 (best) BASIC16.3■□□□□ 0.2
Vps54Q5SPW0 Fgfr3-201ENSMUST00000067150 4218 ntAPPRIS P4 TSL 1 (best) BASIC16.3■□□□□ 0.2
Vps54Q5SPW0 Kyat1-204ENSMUST00000113661 2057 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Vps54Q5SPW0 Wtap-201ENSMUST00000007007 2051 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Vps54Q5SPW0 Mapt-201ENSMUST00000100347 1362 ntAPPRIS P4 TSL 1 (best) BASIC16.3■□□□□ 0.2
Vps54Q5SPW0 Dpp3-201ENSMUST00000025851 2683 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Vps54Q5SPW0 Ngf-202ENSMUST00000106925 1187 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Vps54Q5SPW0 Camp-201ENSMUST00000112022 758 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Vps54Q5SPW0 H2afb1-201ENSMUST00000122446 348 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
Vps54Q5SPW0 Gm16175-201ENSMUST00000128181 248 ntTSL 3 BASIC16.3■□□□□ 0.2
Vps54Q5SPW0 Gm13066-201ENSMUST00000145263 884 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Vps54Q5SPW0 Carmn-202ENSMUST00000182244 988 ntTSL 2 BASIC16.3■□□□□ 0.2
Vps54Q5SPW0 Psmc3ip-201ENSMUST00000019447 1291 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Vps54Q5SPW0 Gm44397-201ENSMUST00000195950 113 ntBASIC16.3■□□□□ 0.2
Vps54Q5SPW0 Fam24a-203ENSMUST00000207784 600 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Vps54Q5SPW0 Olfr373-201ENSMUST00000074540 945 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
Vps54Q5SPW0 Bag6-203ENSMUST00000172571 3599 ntTSL 5 BASIC16.3■□□□□ 0.2
Vps54Q5SPW0 Myo19-202ENSMUST00000093969 4091 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
Vps54Q5SPW0 Tfap2a-202ENSMUST00000110193 2863 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
Vps54Q5SPW0 Zc3hc1-210ENSMUST00000152391 1673 ntTSL 5 BASIC16.3■□□□□ 0.2
Vps54Q5SPW0 Nob1-201ENSMUST00000003946 1658 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Vps54Q5SPW0 Dlg4-204ENSMUST00000108589 3271 ntTSL 5 BASIC16.3■□□□□ 0.2
Vps54Q5SPW0 4833439L19Rik-201ENSMUST00000026989 2727 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Vps54Q5SPW0 Rtfdc1-201ENSMUST00000029005 2173 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Vps54Q5SPW0 Lrrc17-201ENSMUST00000035651 2154 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Vps54Q5SPW0 Prdx2-203ENSMUST00000109734 1612 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
Vps54Q5SPW0 Kcp-201ENSMUST00000078112 4775 ntTSL 5 BASIC16.3■□□□□ 0.2
Vps54Q5SPW0 Ccdc27-201ENSMUST00000047207 2089 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Vps54Q5SPW0 Zfp664-201ENSMUST00000111417 4092 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Vps54Q5SPW0 Emb-201ENSMUST00000022242 2923 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Vps54Q5SPW0 Asb10-202ENSMUST00000117900 1432 ntTSL 5 BASIC16.29■□□□□ 0.2
Vps54Q5SPW0 Gm10371-201ENSMUST00000127429 1411 ntTSL 2 BASIC16.29■□□□□ 0.2
Vps54Q5SPW0 Pip5k1c-210ENSMUST00000163075 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 34.7 ms