Protein–RNA interactions for Protein: Q3U1D9

UPF0602 protein C4orf47 homolog, mousemouse

Predictions only

Length 316 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Q3U1D9 Rpl12-203ENSMUST00000126610 1242 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Q3U1D9 4930407G08Rik-201ENSMUST00000145831 698 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Q3U1D9 Syce3-202ENSMUST00000167959 480 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Q3U1D9 Grp-202ENSMUST00000173530 617 ntAPPRIS ALT2 TSL 2 BASIC11.82□□□□□ -0.52
Q3U1D9 Smco4-202ENSMUST00000178999 820 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Q3U1D9 Gm29152-201ENSMUST00000189284 325 ntTSL 5 BASIC11.82□□□□□ -0.52
Q3U1D9 Mrpl30-205ENSMUST00000193673 662 ntAPPRIS P1 TSL 2 BASIC11.82□□□□□ -0.52
Q3U1D9 1600017P15Rik-202ENSMUST00000193960 890 ntBASIC11.82□□□□□ -0.52
Q3U1D9 Gm43240-201ENSMUST00000198543 630 ntTSL 3 BASIC11.82□□□□□ -0.52
Q3U1D9 CT030161.3-201ENSMUST00000218235 367 ntTSL 3 BASIC11.82□□□□□ -0.52
Q3U1D9 1700127F24Rik-201ENSMUST00000221685 604 ntBASIC11.82□□□□□ -0.52
Q3U1D9 Fau-201ENSMUST00000043074 574 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Q3U1D9 Smco4-201ENSMUST00000045620 954 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Q3U1D9 Fam173a-201ENSMUST00000072735 800 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Q3U1D9 Rnase2b-201ENSMUST00000075648 759 ntAPPRIS P1 BASIC11.82□□□□□ -0.52
Q3U1D9 Gm9396-201ENSMUST00000076703 567 ntBASIC11.82□□□□□ -0.52
Q3U1D9 Sipa1-204ENSMUST00000169854 3583 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
Q3U1D9 Fam187a-201ENSMUST00000100369 1563 ntAPPRIS P1 BASIC11.82□□□□□ -0.52
Q3U1D9 Plekhn1-201ENSMUST00000105569 3014 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Q3U1D9 Itfg1-201ENSMUST00000034140 3306 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Q3U1D9 Mbp-202ENSMUST00000062446 2186 ntAPPRIS P4 TSL 1 (best) BASIC11.82□□□□□ -0.52
Q3U1D9 Dym-201ENSMUST00000039608 2471 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Q3U1D9 Fnbp4-201ENSMUST00000013759 4691 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Q3U1D9 Cbarp-215ENSMUST00000170219 2941 ntAPPRIS P2 TSL 5 BASIC11.82□□□□□ -0.52
Q3U1D9 A930004D18Rik-201ENSMUST00000066163 3217 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Q3U1D9 Cnst-201ENSMUST00000040706 4709 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Q3U1D9 Ap1s2-202ENSMUST00000069041 2226 ntAPPRIS P4 TSL 1 (best) BASIC11.82□□□□□ -0.52
Q3U1D9 Tmem39a-214ENSMUST00000171687 2667 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Q3U1D9 Thumpd1-201ENSMUST00000033236 2689 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Q3U1D9 G3bp2-203ENSMUST00000167918 4232 ntAPPRIS ALT1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Q3U1D9 Capn7-201ENSMUST00000022451 3648 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Q3U1D9 Higd1a-205ENSMUST00000215007 1980 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Q3U1D9 Psmb9-204ENSMUST00000174576 1351 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Q3U1D9 Clptm1-201ENSMUST00000055242 4143 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Q3U1D9 Rgs3-204ENSMUST00000107420 2752 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Q3U1D9 Ptdss1-201ENSMUST00000021990 3424 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Q3U1D9 Tc2n-203ENSMUST00000160830 2005 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Q3U1D9 Il2rb-202ENSMUST00000163494 1894 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Q3U1D9 Pik3cd-204ENSMUST00000105690 4921 ntAPPRIS P4 TSL 1 (best) BASIC11.81□□□□□ -0.52
Q3U1D9 Isg20-202ENSMUST00000118867 697 ntAPPRIS P1 TSL 3 BASIC11.81□□□□□ -0.52
Q3U1D9 Gm15201-201ENSMUST00000136472 1210 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Q3U1D9 Gm6152-201ENSMUST00000151704 340 ntBASIC11.81□□□□□ -0.52
Q3U1D9 Gm8835-201ENSMUST00000173096 1169 ntBASIC11.81□□□□□ -0.52
Q3U1D9 Sct-204ENSMUST00000211667 506 ntAPPRIS ALT2 TSL 2 BASIC11.81□□□□□ -0.52
Q3U1D9 AC159474.1-201ENSMUST00000218454 374 ntTSL 3 BASIC11.81□□□□□ -0.52
Q3U1D9 Gm17870-201ENSMUST00000219489 1174 ntBASIC11.81□□□□□ -0.52
Q3U1D9 Slc35d2-202ENSMUST00000220792 917 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Q3U1D9 Cfc1-201ENSMUST00000027298 1040 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Q3U1D9 1700123K08Rik-201ENSMUST00000031501 1047 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Q3U1D9 Isg20-201ENSMUST00000038142 1083 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Q3U1D9 Lce3a-201ENSMUST00000067318 549 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Q3U1D9 Lyzl4-201ENSMUST00000077706 996 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Q3U1D9 Ppil3-201ENSMUST00000081677 896 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Q3U1D9 Nfatc1-202ENSMUST00000078049 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Q3U1D9 Armcx1-204ENSMUST00000113198 2085 ntAPPRIS P1 TSL 2 BASIC11.81□□□□□ -0.52
Q3U1D9 Mpl-201ENSMUST00000006556 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Q3U1D9 Grin1-203ENSMUST00000114308 4165 ntTSL 5 BASIC11.81□□□□□ -0.52
Q3U1D9 Zyg11b-201ENSMUST00000043616 8691 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Q3U1D9 Klhl18-203ENSMUST00000198164 4538 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Q3U1D9 Tbrg4-201ENSMUST00000000394 2290 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Q3U1D9 Brsk2-204ENSMUST00000105989 2149 ntAPPRIS P4 TSL 5 BASIC11.81□□□□□ -0.52
Q3U1D9 Dysf-214ENSMUST00000204354 6432 ntAPPRIS ALT2 TSL 5 BASIC11.81□□□□□ -0.52
Q3U1D9 Adam11-202ENSMUST00000103081 4620 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
Q3U1D9 Decr2-201ENSMUST00000040907 2187 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Q3U1D9 Car3-201ENSMUST00000029076 1679 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Q3U1D9 Fnbp1-209ENSMUST00000113562 4515 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Q3U1D9 Fbxl4-201ENSMUST00000039234 2546 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Q3U1D9 Rap1gap2-202ENSMUST00000102521 6565 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
Q3U1D9 Srsf10-202ENSMUST00000097844 3055 ntAPPRIS ALT1 TSL 2 BASIC11.8□□□□□ -0.52
Q3U1D9 Bmper-201ENSMUST00000071982 3791 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Q3U1D9 Cacna2d1-202ENSMUST00000078272 7311 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Q3U1D9 Prx-203ENSMUST00000108355 5433 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Q3U1D9 Smpd3-202ENSMUST00000212896 2626 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Q3U1D9 Slc2a6-201ENSMUST00000045702 2138 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Q3U1D9 Lrp11-203ENSMUST00000130590 3220 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Q3U1D9 Klhl21-201ENSMUST00000097773 3986 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Q3U1D9 Vav1-203ENSMUST00000112870 2743 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Q3U1D9 Enpp1-203ENSMUST00000135846 2721 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Q3U1D9 Lims1-203ENSMUST00000105468 1205 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Q3U1D9 Lsm2-202ENSMUST00000114011 840 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Q3U1D9 Gm13112-201ENSMUST00000138795 1258 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Q3U1D9 Tnni1-205ENSMUST00000148201 1150 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
Q3U1D9 Egfl7-208ENSMUST00000149789 683 ntTSL 3 BASIC11.8□□□□□ -0.52
Q3U1D9 Tnni1-206ENSMUST00000152075 1038 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
Q3U1D9 Tnni1-207ENSMUST00000152208 1105 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
Q3U1D9 Mb-202ENSMUST00000166179 1056 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Q3U1D9 Cox16-206ENSMUST00000168463 431 ntTSL 2 BASIC11.8□□□□□ -0.52
Q3U1D9 Mb-203ENSMUST00000169226 1106 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Q3U1D9 Txnl4b-202ENSMUST00000178445 830 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Q3U1D9 A330069E16Rik-201ENSMUST00000181191 887 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Q3U1D9 Gm8652-201ENSMUST00000181363 964 ntBASIC11.8□□□□□ -0.52
Q3U1D9 2610306M01Rik-201ENSMUST00000185414 1042 ntBASIC11.8□□□□□ -0.52
Q3U1D9 Gm29649-201ENSMUST00000185649 419 ntBASIC11.8□□□□□ -0.52
Q3U1D9 Gm42906-201ENSMUST00000202365 408 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
Q3U1D9 Srgn-201ENSMUST00000020271 938 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Q3U1D9 AC073947.2-201ENSMUST00000215888 1130 ntBASIC11.8□□□□□ -0.52
Q3U1D9 Rpsa-ps10-201ENSMUST00000057740 885 ntBASIC11.8□□□□□ -0.52
Q3U1D9 Clcf1-201ENSMUST00000046506 1847 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Q3U1D9 Cfl1-202ENSMUST00000209469 2354 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Q3U1D9 Ttll3-206ENSMUST00000204026 1472 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 86.7 ms