Protein–RNA interactions for Protein: Q3TJD7

Pdlim7, PDZ and LIM domain protein 7, mousemouse

Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim7Q3TJD7 Trmt10c-201ENSMUST00000059052 3002 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Pdlim7Q3TJD7 Usp27x-203ENSMUST00000191497 4273 ntAPPRIS P1 TSL 2 BASIC15.18■□□□□ 0.02
Pdlim7Q3TJD7 Ppp2r5c-204ENSMUST00000221074 1971 ntTSL 5 BASIC15.18■□□□□ 0.02
Pdlim7Q3TJD7 Mapk9-205ENSMUST00000109179 4682 ntTSL 5 BASIC15.18■□□□□ 0.02
Pdlim7Q3TJD7 Mapk9-209ENSMUST00000164643 4682 ntTSL 5 BASIC15.18■□□□□ 0.02
Pdlim7Q3TJD7 Mapk9-210ENSMUST00000178543 4677 ntAPPRIS ALT1 TSL 5 BASIC15.18■□□□□ 0.02
Pdlim7Q3TJD7 Hdac2-202ENSMUST00000105510 3250 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Pdlim7Q3TJD7 Slc12a5-201ENSMUST00000099092 6028 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Pdlim7Q3TJD7 Ccdc88c-202ENSMUST00000085096 6313 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
Pdlim7Q3TJD7 Gm45338-207ENSMUST00000211499 1405 ntTSL 5 BASIC15.17■□□□□ 0.02
Pdlim7Q3TJD7 Fam78b-206ENSMUST00000190081 4666 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Pdlim7Q3TJD7 B230219D22Rik-201ENSMUST00000057844 4652 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Pdlim7Q3TJD7 Efemp1-201ENSMUST00000020759 2037 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Pdlim7Q3TJD7 Agrn-206ENSMUST00000180572 6891 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
Pdlim7Q3TJD7 Gm15889-202ENSMUST00000212669 2443 ntBASIC15.17■□□□□ 0.02
Pdlim7Q3TJD7 Chodl-201ENSMUST00000023568 2535 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Pdlim7Q3TJD7 Pnpla2-203ENSMUST00000164016 2625 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Pdlim7Q3TJD7 Dnm1-217ENSMUST00000202578 2820 ntAPPRIS P2 TSL 5 BASIC15.17■□□□□ 0.02
Pdlim7Q3TJD7 Kif1c-201ENSMUST00000072187 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Pdlim7Q3TJD7 Fam122b-203ENSMUST00000114841 3074 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Pdlim7Q3TJD7 2010300F17Rik-202ENSMUST00000181758 2493 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Pdlim7Q3TJD7 Higd1a-205ENSMUST00000215007 1980 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Pdlim7Q3TJD7 Abhd6-203ENSMUST00000225234 1958 ntBASIC15.17■□□□□ 0.02
Pdlim7Q3TJD7 Fbxo44-208ENSMUST00000167160 1572 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
Pdlim7Q3TJD7 Wfdc1-201ENSMUST00000024107 1371 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Pdlim7Q3TJD7 Slc24a3-202ENSMUST00000110007 4048 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Pdlim7Q3TJD7 Gm22902-201ENSMUST00000158488 302 ntBASIC15.17■□□□□ 0.02
Pdlim7Q3TJD7 Ldha-213ENSMUST00000210631 685 ntTSL 5 BASIC15.17■□□□□ 0.02
Pdlim7Q3TJD7 Gm32926-201ENSMUST00000214043 681 ntTSL 3 BASIC15.17■□□□□ 0.02
Pdlim7Q3TJD7 Rps3a1-201ENSMUST00000029722 977 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Pdlim7Q3TJD7 9330182L06Rik-202ENSMUST00000115348 3403 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Pdlim7Q3TJD7 Ccne2-202ENSMUST00000108324 2908 ntAPPRIS P4 TSL 1 (best) BASIC15.17■□□□□ 0.02
Pdlim7Q3TJD7 Gm20632-201ENSMUST00000176760 2427 ntBASIC15.17■□□□□ 0.02
Pdlim7Q3TJD7 Zfp451-201ENSMUST00000019861 3958 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
Pdlim7Q3TJD7 Hykk-201ENSMUST00000039742 5110 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Pdlim7Q3TJD7 Ccdc158-203ENSMUST00000150359 3353 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Pdlim7Q3TJD7 Slmap-212ENSMUST00000139075 4508 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Pdlim7Q3TJD7 Dnmt3b-210ENSMUST00000109774 4320 ntAPPRIS P4 TSL 1 (best) BASIC15.17■□□□□ 0.02
Pdlim7Q3TJD7 Sh2b1-204ENSMUST00000205497 2854 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Pdlim7Q3TJD7 Zfp839-201ENSMUST00000170060 3723 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Pdlim7Q3TJD7 Slc52a3-204ENSMUST00000109861 2590 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Pdlim7Q3TJD7 Atrip-201ENSMUST00000045011 2572 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Pdlim7Q3TJD7 Uqcrq-201ENSMUST00000061326 1521 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Pdlim7Q3TJD7 Papola-202ENSMUST00000109901 4380 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Pdlim7Q3TJD7 Troap-201ENSMUST00000039665 2264 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Pdlim7Q3TJD7 Sh2d7-202ENSMUST00000118413 1316 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Pdlim7Q3TJD7 Saxo1-201ENSMUST00000030216 1892 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Pdlim7Q3TJD7 Slc41a3-201ENSMUST00000032177 2324 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Pdlim7Q3TJD7 Atf7-202ENSMUST00000108828 2887 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Pdlim7Q3TJD7 Hsd17b11-202ENSMUST00000119025 2234 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Pdlim7Q3TJD7 Six1-201ENSMUST00000050029 3316 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Pdlim7Q3TJD7 Trhde-201ENSMUST00000061632 5714 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Pdlim7Q3TJD7 Art3-206ENSMUST00000120416 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Pdlim7Q3TJD7 Irf3-201ENSMUST00000003284 2031 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Pdlim7Q3TJD7 Hnrnpa1-201ENSMUST00000036004 1918 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Pdlim7Q3TJD7 Rad17-202ENSMUST00000177848 2392 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Pdlim7Q3TJD7 Avpr2-201ENSMUST00000033765 1812 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Pdlim7Q3TJD7 Col17a1-202ENSMUST00000086923 5477 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
Pdlim7Q3TJD7 Wsb2-ps-201ENSMUST00000117937 1217 ntBASIC15.16■□□□□ 0.02
Pdlim7Q3TJD7 D230022J07Rik-201ENSMUST00000144735 1062 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Pdlim7Q3TJD7 Gm13165-201ENSMUST00000152923 383 ntTSL 5 BASIC15.16■□□□□ 0.02
Pdlim7Q3TJD7 Gm27341-201ENSMUST00000183570 106 ntBASIC15.16■□□□□ 0.02
Pdlim7Q3TJD7 Prr29-204ENSMUST00000188561 592 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
Pdlim7Q3TJD7 Prr29-206ENSMUST00000190795 822 ntTSL 5 BASIC15.16■□□□□ 0.02
Pdlim7Q3TJD7 Gm9445-201ENSMUST00000207454 1285 ntBASIC15.16■□□□□ 0.02
Pdlim7Q3TJD7 Gm39929-201ENSMUST00000209672 693 ntTSL 3 BASIC15.16■□□□□ 0.02
Pdlim7Q3TJD7 AC022775.2-201ENSMUST00000227885 646 ntBASIC15.16■□□□□ 0.02
Pdlim7Q3TJD7 Tatdn3-201ENSMUST00000027945 1196 ntAPPRIS ALT2 TSL 3 BASIC15.16■□□□□ 0.02
Pdlim7Q3TJD7 Leap2-201ENSMUST00000036045 531 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Pdlim7Q3TJD7 Ctrc-201ENSMUST00000037059 951 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
Pdlim7Q3TJD7 Cdc26-201ENSMUST00000084525 819 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Pdlim7Q3TJD7 Ankrd23-202ENSMUST00000193083 2277 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Pdlim7Q3TJD7 Rai2-202ENSMUST00000112338 2165 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Pdlim7Q3TJD7 Haus5-201ENSMUST00000019697 2187 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Pdlim7Q3TJD7 Pcdha7-201ENSMUST00000192631 5337 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Pdlim7Q3TJD7 Map3k7-201ENSMUST00000037607 5773 ntAPPRIS ALT1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Pdlim7Q3TJD7 Trim41-201ENSMUST00000047145 3432 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Pdlim7Q3TJD7 Tjap1-211ENSMUST00000225080 2412 ntAPPRIS P2 BASIC15.16■□□□□ 0.02
Pdlim7Q3TJD7 Pex3-202ENSMUST00000105539 1961 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Pdlim7Q3TJD7 Kyat1-205ENSMUST00000113662 1850 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
Pdlim7Q3TJD7 Irf7-203ENSMUST00000106023 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Pdlim7Q3TJD7 Gm8793-201ENSMUST00000183069 1303 ntBASIC15.16■□□□□ 0.02
Pdlim7Q3TJD7 Erc1-207ENSMUST00000183911 3865 ntTSL 5 BASIC15.16■□□□□ 0.02
Pdlim7Q3TJD7 Rad9a-201ENSMUST00000025740 2046 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Pdlim7Q3TJD7 Hoxa7-201ENSMUST00000048715 2009 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Pdlim7Q3TJD7 Sez6-202ENSMUST00000093995 4239 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
Pdlim7Q3TJD7 Ddx27-201ENSMUST00000018143 2714 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Pdlim7Q3TJD7 Slc35a2-202ENSMUST00000115660 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Pdlim7Q3TJD7 Ogfrl1-201ENSMUST00000027343 4844 ntAPPRIS P1 TSL 3 BASIC15.15■□□□□ 0.02
Pdlim7Q3TJD7 Gm18244-201ENSMUST00000219747 1566 ntBASIC15.15■□□□□ 0.02
Pdlim7Q3TJD7 Tmem8b-203ENSMUST00000107866 4998 ntTSL 5 BASIC15.15■□□□□ 0.02
Pdlim7Q3TJD7 Ak1-203ENSMUST00000113278 2085 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Pdlim7Q3TJD7 Dda1-206ENSMUST00000138892 1738 ntTSL 3 BASIC15.15■□□□□ 0.02
Pdlim7Q3TJD7 Klhl12-203ENSMUST00000116528 3277 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
Pdlim7Q3TJD7 Ociad2-201ENSMUST00000087195 2554 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Pdlim7Q3TJD7 Ap5m1-205ENSMUST00000227431 3757 ntBASIC15.15■□□□□ 0.02
Pdlim7Q3TJD7 Sf3a2-203ENSMUST00000148665 2213 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Pdlim7Q3TJD7 Pqbp1-203ENSMUST00000115655 1148 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Pdlim7Q3TJD7 Gm2231-201ENSMUST00000125661 612 ntBASIC15.15■□□□□ 0.02
Pdlim7Q3TJD7 Nkx2-2os-202ENSMUST00000184407 458 ntBASIC15.15■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 30.1 ms