Protein–RNA interactions for Protein: Q2EG98

Pkd1l3, Polycystic kidney disease protein 1-like 3, mousemouse

Predictions only

Length 2,201 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pkd1l3Q2EG98 Rb1cc1-201ENSMUST00000027040 7607 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Pkd1l3Q2EG98 Timm10b-202ENSMUST00000106780 671 ntAPPRIS P2 TSL 2 BASIC12.21□□□□□ -0.46
Pkd1l3Q2EG98 Arpc3-203ENSMUST00000111713 708 ntTSL 3 BASIC12.21□□□□□ -0.46
Pkd1l3Q2EG98 Rab3d-201ENSMUST00000115351 3835 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Pkd1l3Q2EG98 Pisd-ps2-202ENSMUST00000142526 1175 ntBASIC12.21□□□□□ -0.46
Pkd1l3Q2EG98 Gm8565-201ENSMUST00000183259 1014 ntBASIC12.21□□□□□ -0.46
Pkd1l3Q2EG98 Gm42442-201ENSMUST00000197951 1133 ntBASIC12.21□□□□□ -0.46
Pkd1l3Q2EG98 Gm45505-201ENSMUST00000210252 948 ntTSL 5 BASIC12.21□□□□□ -0.46
Pkd1l3Q2EG98 Chd3os-203ENSMUST00000218008 1026 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
Pkd1l3Q2EG98 AC131997.1-201ENSMUST00000228611 1229 ntBASIC12.21□□□□□ -0.46
Pkd1l3Q2EG98 Txn1-201ENSMUST00000030051 1051 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Pkd1l3Q2EG98 Gm5779-202ENSMUST00000219564 1477 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
Pkd1l3Q2EG98 H3f3b-202ENSMUST00000106454 2514 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
Pkd1l3Q2EG98 Gm26788-201ENSMUST00000181692 1750 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Pkd1l3Q2EG98 Saraf-201ENSMUST00000033933 1860 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Pkd1l3Q2EG98 Npr3-201ENSMUST00000066529 6892 ntAPPRIS P2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Pkd1l3Q2EG98 Gm44065-201ENSMUST00000203184 3527 ntBASIC12.2□□□□□ -0.46
Pkd1l3Q2EG98 Klhdc8b-207ENSMUST00000193286 2956 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Pkd1l3Q2EG98 Kcnc1-201ENSMUST00000025202 7760 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Pkd1l3Q2EG98 Rubcn-204ENSMUST00000119810 3371 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
Pkd1l3Q2EG98 Ildr2-201ENSMUST00000111416 8251 ntAPPRIS P2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Pkd1l3Q2EG98 Cyb561d1-202ENSMUST00000106654 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Pkd1l3Q2EG98 Slc2a6-201ENSMUST00000045702 2138 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Pkd1l3Q2EG98 Atp9a-201ENSMUST00000029060 3529 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Pkd1l3Q2EG98 Abhd15-201ENSMUST00000094004 2662 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Pkd1l3Q2EG98 Gm10040-201ENSMUST00000080726 1662 ntBASIC12.2□□□□□ -0.46
Pkd1l3Q2EG98 Cpsf4l-203ENSMUST00000106617 1123 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Pkd1l3Q2EG98 Gm43755-201ENSMUST00000200001 408 ntTSL 5 BASIC12.2□□□□□ -0.46
Pkd1l3Q2EG98 Lamtor2-201ENSMUST00000029698 668 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Pkd1l3Q2EG98 Ushbp1-201ENSMUST00000049184 2438 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Pkd1l3Q2EG98 Kctd14-204ENSMUST00000205577 2310 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Pkd1l3Q2EG98 Gm15850-201ENSMUST00000134998 2049 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Pkd1l3Q2EG98 Tmem184a-201ENSMUST00000044002 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Pkd1l3Q2EG98 Map2k7-203ENSMUST00000110994 1600 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Pkd1l3Q2EG98 Arap3-201ENSMUST00000042944 5224 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Pkd1l3Q2EG98 Gm13425-201ENSMUST00000145389 5391 ntTSL 3 BASIC12.2□□□□□ -0.46
Pkd1l3Q2EG98 Pcdha3-201ENSMUST00000192503 5332 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Pkd1l3Q2EG98 Prrt3-202ENSMUST00000204134 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Pkd1l3Q2EG98 Smim1-201ENSMUST00000125533 2568 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Pkd1l3Q2EG98 Pdcd6-203ENSMUST00000222759 1376 ntAPPRIS ALT1 TSL 2 BASIC12.19□□□□□ -0.46
Pkd1l3Q2EG98 Il17rd-203ENSMUST00000225146 3366 ntBASIC12.19□□□□□ -0.46
Pkd1l3Q2EG98 4933427I22Rik-201ENSMUST00000138672 393 ntTSL 3 BASIC12.19□□□□□ -0.46
Pkd1l3Q2EG98 Gm15917-201ENSMUST00000162771 487 ntTSL 2 BASIC12.19□□□□□ -0.46
Pkd1l3Q2EG98 Gm18934-201ENSMUST00000216671 1044 ntBASIC12.19□□□□□ -0.46
Pkd1l3Q2EG98 Tex26-201ENSMUST00000031667 1137 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Pkd1l3Q2EG98 Sphk2-201ENSMUST00000072836 2968 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Pkd1l3Q2EG98 Acy1-201ENSMUST00000024031 1529 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Pkd1l3Q2EG98 Emd-202ENSMUST00000088313 1338 ntTSL 2 BASIC12.19□□□□□ -0.46
Pkd1l3Q2EG98 Mafk-201ENSMUST00000018287 2849 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Pkd1l3Q2EG98 Xkr5-202ENSMUST00000095438 2838 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Pkd1l3Q2EG98 Cacna1g-207ENSMUST00000107789 8383 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
Pkd1l3Q2EG98 1300002E11Rik-202ENSMUST00000181780 1650 ntTSL 2 BASIC12.19□□□□□ -0.46
Pkd1l3Q2EG98 Btaf1-201ENSMUST00000099494 7204 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Pkd1l3Q2EG98 Gm9917-201ENSMUST00000180865 5192 ntTSL 3 BASIC12.19□□□□□ -0.46
Pkd1l3Q2EG98 Ispd-205ENSMUST00000221895 4022 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Pkd1l3Q2EG98 Kcna5-201ENSMUST00000060972 2862 ntAPPRIS P1 BASIC12.19□□□□□ -0.46
Pkd1l3Q2EG98 Zranb2-201ENSMUST00000029831 2540 ntTSL 5 BASIC12.19□□□□□ -0.46
Pkd1l3Q2EG98 Ttll3-201ENSMUST00000032414 3168 ntAPPRIS P2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Pkd1l3Q2EG98 Naaa-202ENSMUST00000159345 1629 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Pkd1l3Q2EG98 Hp1bp3-204ENSMUST00000105826 3348 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
Pkd1l3Q2EG98 Fam149b-211ENSMUST00000224930 2716 ntAPPRIS ALT2 BASIC12.19□□□□□ -0.46
Pkd1l3Q2EG98 Gm15444-201ENSMUST00000148335 388 ntTSL 5 BASIC12.19□□□□□ -0.46
Pkd1l3Q2EG98 1700061E18Rik-201ENSMUST00000154159 588 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Pkd1l3Q2EG98 Mir6420-201ENSMUST00000185032 102 ntBASIC12.19□□□□□ -0.46
Pkd1l3Q2EG98 Gm37753-201ENSMUST00000192178 439 ntTSL 2 BASIC12.19□□□□□ -0.46
Pkd1l3Q2EG98 Ssr2-202ENSMUST00000192495 620 ntTSL 5 BASIC12.19□□□□□ -0.46
Pkd1l3Q2EG98 Gm38230-201ENSMUST00000193572 1159 ntBASIC12.19□□□□□ -0.46
Pkd1l3Q2EG98 Oit1-201ENSMUST00000022269 1253 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Pkd1l3Q2EG98 Krtcap2-201ENSMUST00000040888 1172 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Pkd1l3Q2EG98 Ifitm10-202ENSMUST00000084412 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Pkd1l3Q2EG98 N4bp3-201ENSMUST00000001080 2367 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Pkd1l3Q2EG98 Uqcrq-201ENSMUST00000061326 1521 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Pkd1l3Q2EG98 Fbxo34-203ENSMUST00000163324 3132 ntAPPRIS ALT2 TSL 2 BASIC12.19□□□□□ -0.46
Pkd1l3Q2EG98 F830212C03Rik-201ENSMUST00000191701 2285 ntBASIC12.19□□□□□ -0.46
Pkd1l3Q2EG98 Gins3-201ENSMUST00000034094 2519 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Pkd1l3Q2EG98 Top1mt-201ENSMUST00000000958 1903 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Pkd1l3Q2EG98 Myo9b-201ENSMUST00000071935 7082 ntAPPRIS P3 TSL 5 BASIC12.19□□□□□ -0.46
Pkd1l3Q2EG98 Rbak-201ENSMUST00000049861 3335 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Pkd1l3Q2EG98 Slc26a4-201ENSMUST00000001253 3075 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Pkd1l3Q2EG98 Sema3b-204ENSMUST00000102531 2958 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Pkd1l3Q2EG98 Prdm10-202ENSMUST00000117389 1952 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Pkd1l3Q2EG98 Fdft1-204ENSMUST00000224625 3698 ntAPPRIS P1 BASIC12.18□□□□□ -0.46
Pkd1l3Q2EG98 Cchcr1-202ENSMUST00000164242 2656 ntAPPRIS P2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Pkd1l3Q2EG98 Dctn4-202ENSMUST00000223590 1530 ntBASIC12.18□□□□□ -0.46
Pkd1l3Q2EG98 Lcn5-203ENSMUST00000100313 660 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Pkd1l3Q2EG98 Eaf2-204ENSMUST00000114829 1030 ntAPPRIS P2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Pkd1l3Q2EG98 Map2k3os-201ENSMUST00000123544 1291 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Pkd1l3Q2EG98 Mir1938-201ENSMUST00000158746 100 ntBASIC12.18□□□□□ -0.46
Pkd1l3Q2EG98 Gm27486-201ENSMUST00000184923 80 ntBASIC12.18□□□□□ -0.46
Pkd1l3Q2EG98 1700065I16Rik-202ENSMUST00000185477 813 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Pkd1l3Q2EG98 Gm18054-201ENSMUST00000207539 555 ntBASIC12.18□□□□□ -0.46
Pkd1l3Q2EG98 Gm7561-201ENSMUST00000211203 886 ntBASIC12.18□□□□□ -0.46
Pkd1l3Q2EG98 Gstt2-203ENSMUST00000218500 794 ntTSL 5 BASIC12.18□□□□□ -0.46
Pkd1l3Q2EG98 Mal-201ENSMUST00000028853 486 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Pkd1l3Q2EG98 4933434E20Rik-202ENSMUST00000029552 1080 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Pkd1l3Q2EG98 Tomm7-201ENSMUST00000030851 1125 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Pkd1l3Q2EG98 Alkbh7-202ENSMUST00000074141 736 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Pkd1l3Q2EG98 Gm5161-201ENSMUST00000075243 853 ntBASIC12.18□□□□□ -0.46
Pkd1l3Q2EG98 Gm10478-201ENSMUST00000084451 396 ntBASIC12.18□□□□□ -0.46
Pkd1l3Q2EG98 Gm10570-201ENSMUST00000097865 513 ntAPPRIS P1 BASIC12.18□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 53.9 ms