Protein–RNA interactions for Protein: Q06507

Atf4, Cyclic AMP-dependent transcription factor ATF-4, mousemouse

Predictions only

Length 349 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atf4Q06507 Lrriq4-202ENSMUST00000108267 2387 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
Atf4Q06507 Trim27-201ENSMUST00000021761 4204 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Atf4Q06507 Ptpn1-201ENSMUST00000029053 4213 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Atf4Q06507 Gm11685-201ENSMUST00000141559 1332 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Atf4Q06507 Camk2d-203ENSMUST00000106399 4169 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Atf4Q06507 Dusp23-201ENSMUST00000027826 1410 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Atf4Q06507 Dmkn-204ENSMUST00000085691 2007 ntAPPRIS P4 TSL 1 (best) BASIC13.13□□□□□ -0.31
Atf4Q06507 Slc34a1-201ENSMUST00000057167 2433 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Atf4Q06507 Zbtb49-202ENSMUST00000114113 2645 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Atf4Q06507 Zfp90-201ENSMUST00000034382 2632 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Atf4Q06507 Il7-205ENSMUST00000194279 4858 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Atf4Q06507 Ebf4-202ENSMUST00000110287 2580 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
Atf4Q06507 Adal-205ENSMUST00000119031 2477 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
Atf4Q06507 Dok7-201ENSMUST00000050709 2498 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Atf4Q06507 Gm9918-201ENSMUST00000181801 2192 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Atf4Q06507 Zscan12-202ENSMUST00000099720 2182 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Atf4Q06507 Mmp11-202ENSMUST00000120281 1793 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Atf4Q06507 Mcrs1-202ENSMUST00000163506 1795 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Atf4Q06507 Alx1-208ENSMUST00000219194 1695 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
Atf4Q06507 Zpbp2-201ENSMUST00000017339 1455 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
Atf4Q06507 Hist1h4d-201ENSMUST00000102968 1138 ntAPPRIS P1 BASIC13.13□□□□□ -0.31
Atf4Q06507 Mrps17-202ENSMUST00000118420 843 ntAPPRIS P1 TSL 2 BASIC13.13□□□□□ -0.31
Atf4Q06507 Gm13464-201ENSMUST00000119418 935 ntBASIC13.13□□□□□ -0.31
Atf4Q06507 Gm11425-201ENSMUST00000119608 498 ntBASIC13.13□□□□□ -0.31
Atf4Q06507 Gm12134-201ENSMUST00000122109 520 ntBASIC13.13□□□□□ -0.31
Atf4Q06507 Mvk-203ENSMUST00000124260 1051 ntTSL 5 BASIC13.13□□□□□ -0.31
Atf4Q06507 Sec22b-203ENSMUST00000130620 640 ntTSL 2 BASIC13.13□□□□□ -0.31
Atf4Q06507 Gm11574-201ENSMUST00000139752 946 ntTSL 5 BASIC13.13□□□□□ -0.31
Atf4Q06507 Cpne8-201ENSMUST00000014777 697 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Atf4Q06507 Pax8-208ENSMUST00000153601 1226 ntTSL 5 BASIC13.13□□□□□ -0.31
Atf4Q06507 Speer4f2-201ENSMUST00000166086 1278 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
Atf4Q06507 Gm17019-201ENSMUST00000167908 1162 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Atf4Q06507 Stk19-ps1-201ENSMUST00000174597 517 ntBASIC13.13□□□□□ -0.31
Atf4Q06507 Gm26693-201ENSMUST00000181318 1021 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Atf4Q06507 Gm26600-201ENSMUST00000181637 1256 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Atf4Q06507 Gm37641-201ENSMUST00000193837 239 ntBASIC13.13□□□□□ -0.31
Atf4Q06507 Gm37709-201ENSMUST00000195074 600 ntBASIC13.13□□□□□ -0.31
Atf4Q06507 Gm4129-201ENSMUST00000220083 625 ntTSL 3 BASIC13.13□□□□□ -0.31
Atf4Q06507 Gm7745-202ENSMUST00000222914 567 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Atf4Q06507 AC154730.1-201ENSMUST00000227874 816 ntBASIC13.13□□□□□ -0.31
Atf4Q06507 Gm9396-201ENSMUST00000076703 567 ntBASIC13.13□□□□□ -0.31
Atf4Q06507 Med22-202ENSMUST00000102899 3506 ntAPPRIS ALT1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Atf4Q06507 Usp1-202ENSMUST00000091358 3527 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Atf4Q06507 Ermard-203ENSMUST00000097393 2535 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
Atf4Q06507 Gm45779-201ENSMUST00000212189 4064 ntBASIC13.13□□□□□ -0.31
Atf4Q06507 Ror2-201ENSMUST00000021918 3985 ntAPPRIS P2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Atf4Q06507 Gm45504-201ENSMUST00000211407 2107 ntBASIC13.13□□□□□ -0.31
Atf4Q06507 Cox16-201ENSMUST00000002757 2007 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Atf4Q06507 Sp9-201ENSMUST00000090813 4514 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Atf4Q06507 Snx8-205ENSMUST00000196566 1914 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
Atf4Q06507 Sp2-203ENSMUST00000107624 3055 ntAPPRIS P2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Atf4Q06507 Lrrc41-201ENSMUST00000030471 3065 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Atf4Q06507 Dsp-202ENSMUST00000127906 7761 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
Atf4Q06507 Nup88-202ENSMUST00000108530 2389 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Atf4Q06507 Rbm8a2-201ENSMUST00000104983 1338 ntAPPRIS P1 BASIC13.13□□□□□ -0.31
Atf4Q06507 App-204ENSMUST00000227021 3264 ntAPPRIS ALT2 BASIC13.12□□□□□ -0.31
Atf4Q06507 Zic4-209ENSMUST00000173933 1764 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
Atf4Q06507 Gm13589-201ENSMUST00000146404 1675 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Atf4Q06507 Gnpat-201ENSMUST00000034466 2984 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Atf4Q06507 Papd5-203ENSMUST00000119033 4624 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Atf4Q06507 Mrap2-202ENSMUST00000113149 2112 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
Atf4Q06507 Fkbp10-201ENSMUST00000001595 2584 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Atf4Q06507 Rad18-201ENSMUST00000068487 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Atf4Q06507 Adm-201ENSMUST00000033054 1390 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Atf4Q06507 Smyd5-201ENSMUST00000045693 2486 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Atf4Q06507 Rara-203ENSMUST00000107474 2380 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
Atf4Q06507 Wwox-202ENSMUST00000109107 2383 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Atf4Q06507 Zfp318-204ENSMUST00000138127 3936 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
Atf4Q06507 Hspb8-201ENSMUST00000036991 1816 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Atf4Q06507 Arf1-201ENSMUST00000061242 1800 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Atf4Q06507 Trav3d-3-201ENSMUST00000103599 276 ntAPPRIS P1 BASIC13.12□□□□□ -0.31
Atf4Q06507 Trav3n-3-201ENSMUST00000103625 276 ntAPPRIS P1 BASIC13.12□□□□□ -0.31
Atf4Q06507 Gm15420-201ENSMUST00000133274 382 ntTSL 3 BASIC13.12□□□□□ -0.31
Atf4Q06507 Flg-208ENSMUST00000180308 1076 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Atf4Q06507 Gm9726-201ENSMUST00000180321 678 ntBASIC13.12□□□□□ -0.31
Atf4Q06507 Trav3-3-202ENSMUST00000183835 276 ntAPPRIS P1 BASIC13.12□□□□□ -0.31
Atf4Q06507 Gm42846-201ENSMUST00000201771 514 ntTSL 3 BASIC13.12□□□□□ -0.31
Atf4Q06507 Hddc3-208ENSMUST00000206122 696 ntTSL 3 BASIC13.12□□□□□ -0.31
Atf4Q06507 Gm44593-201ENSMUST00000208372 1249 ntTSL 5 BASIC13.12□□□□□ -0.31
Atf4Q06507 AC165157.4-201ENSMUST00000220587 139 ntBASIC13.12□□□□□ -0.31
Atf4Q06507 Gstm1-201ENSMUST00000004140 1289 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Atf4Q06507 Ift43-201ENSMUST00000054565 773 ntAPPRIS P2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Atf4Q06507 Hist1h2aa-201ENSMUST00000072391 390 ntAPPRIS P1 BASIC13.12□□□□□ -0.31
Atf4Q06507 2610028D06Rik-201ENSMUST00000215216 1713 ntBASIC13.12□□□□□ -0.31
Atf4Q06507 Cacnb4-206ENSMUST00000178799 7981 ntTSL 5 BASIC13.12□□□□□ -0.31
Atf4Q06507 Sumo3-201ENSMUST00000020501 2630 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
Atf4Q06507 Cabp7-201ENSMUST00000009219 2628 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Atf4Q06507 Fbn1-201ENSMUST00000028633 9847 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Atf4Q06507 Islr2-210ENSMUST00000215950 4109 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
Atf4Q06507 Xylb-201ENSMUST00000039610 3383 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Atf4Q06507 Angel2-202ENSMUST00000066632 3714 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Atf4Q06507 BC003331-205ENSMUST00000111913 3273 ntAPPRIS P3 TSL 5 BASIC13.12□□□□□ -0.31
Atf4Q06507 Dym-201ENSMUST00000039608 2471 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Atf4Q06507 AC114008.2-201ENSMUST00000227699 1347 ntBASIC13.12□□□□□ -0.31
Atf4Q06507 Ldhb-201ENSMUST00000032373 1304 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Atf4Q06507 Vldlr-207ENSMUST00000167487 7971 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
Atf4Q06507 Col25a1-201ENSMUST00000080335 2624 ntAPPRIS P4 TSL 5 BASIC13.11□□□□□ -0.31
Atf4Q06507 Rcbtb1-202ENSMUST00000043227 3903 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Atf4Q06507 Mrpl58-203ENSMUST00000106539 2522 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Atf4Q06507 Osbpl11-201ENSMUST00000039733 4520 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 49.9 ms