Protein–RNA interactions for Protein: Q02788

Col6a2, Collagen alpha-2(VI) chain, mousemouse

Predictions only

Length 1,034 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a2Q02788 Gm42550-201ENSMUST00000201553 960 ntBASIC13.59□□□□□ -0.23
Col6a2Q02788 Gm34030-202ENSMUST00000211434 1126 ntTSL 5 BASIC13.59□□□□□ -0.23
Col6a2Q02788 Polr2h-201ENSMUST00000021405 950 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Col6a2Q02788 Gm6983-201ENSMUST00000214912 628 ntBASIC13.59□□□□□ -0.23
Col6a2Q02788 Cradd-202ENSMUST00000217809 1115 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Col6a2Q02788 AC125117.1-201ENSMUST00000228121 468 ntBASIC13.59□□□□□ -0.23
Col6a2Q02788 Epb41l2-201ENSMUST00000053748 4385 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Col6a2Q02788 Grtp1-206ENSMUST00000210317 3013 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Col6a2Q02788 Oasl1-202ENSMUST00000112143 2181 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Col6a2Q02788 Haus5-201ENSMUST00000019697 2187 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Col6a2Q02788 Kpna6-201ENSMUST00000003828 2195 ntAPPRIS ALT1 TSL 5 BASIC13.59□□□□□ -0.23
Col6a2Q02788 Gata2-201ENSMUST00000015197 3571 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Col6a2Q02788 Nipa2-204ENSMUST00000119201 3925 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Col6a2Q02788 Tm9sf1-201ENSMUST00000002391 2382 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Col6a2Q02788 Rhoj-201ENSMUST00000055390 2350 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Col6a2Q02788 Secisbp2l-201ENSMUST00000053699 6797 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Col6a2Q02788 Slc35c2-204ENSMUST00000109300 2008 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Col6a2Q02788 D830030K20Rik-201ENSMUST00000112797 1695 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Col6a2Q02788 Zc3hc1-210ENSMUST00000152391 1673 ntTSL 5 BASIC13.59□□□□□ -0.23
Col6a2Q02788 Gk-201ENSMUST00000026039 4340 ntAPPRIS ALT1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Col6a2Q02788 Pxdn-202ENSMUST00000122328 6614 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Col6a2Q02788 Adcyap1r1-208ENSMUST00000172084 1344 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
Col6a2Q02788 Adamts8-201ENSMUST00000068135 3631 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Col6a2Q02788 Zfp410-201ENSMUST00000045931 2597 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Col6a2Q02788 Gm20546-201ENSMUST00000173141 1889 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Col6a2Q02788 Hcrtr1-202ENSMUST00000119423 2439 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
Col6a2Q02788 Syt17-204ENSMUST00000203796 2957 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Col6a2Q02788 Mcm9-206ENSMUST00000220007 3513 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Col6a2Q02788 4930453N24Rik-201ENSMUST00000076991 5522 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Col6a2Q02788 Gm11732-201ENSMUST00000151381 1742 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Col6a2Q02788 Zfp566-201ENSMUST00000088785 1709 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Col6a2Q02788 Gm28182-201ENSMUST00000188354 2477 ntBASIC13.58□□□□□ -0.23
Col6a2Q02788 Rundc1-201ENSMUST00000040561 3223 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
Col6a2Q02788 Ypel3-203ENSMUST00000106357 1594 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
Col6a2Q02788 Igsf5-202ENSMUST00000081093 1554 ntTSL 1 (best) BASIC13.58□□□□□ -0.23
Col6a2Q02788 Kmt5c-203ENSMUST00000108583 2177 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Col6a2Q02788 Tial1-203ENSMUST00000106228 2835 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Col6a2Q02788 Stxbp1-202ENSMUST00000077458 3616 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Col6a2Q02788 Gm15371-201ENSMUST00000117057 784 ntBASIC13.58□□□□□ -0.24
Col6a2Q02788 Gm13112-201ENSMUST00000138795 1258 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Col6a2Q02788 Abhd14a-202ENSMUST00000171678 1262 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Col6a2Q02788 Gm37748-201ENSMUST00000194379 1140 ntBASIC13.58□□□□□ -0.24
Col6a2Q02788 Gm7067-201ENSMUST00000207698 1249 ntBASIC13.58□□□□□ -0.24
Col6a2Q02788 Haus8-202ENSMUST00000110071 1452 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.24
Col6a2Q02788 Ak1-203ENSMUST00000113278 2085 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Col6a2Q02788 Gm29683-203ENSMUST00000209071 2488 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Col6a2Q02788 Sorbs3-204ENSMUST00000227929 2460 ntBASIC13.58□□□□□ -0.24
Col6a2Q02788 Erc1-207ENSMUST00000183911 3865 ntTSL 5 BASIC13.58□□□□□ -0.24
Col6a2Q02788 Chodl-201ENSMUST00000023568 2535 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Col6a2Q02788 Ecm1-202ENSMUST00000117507 1900 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.24
Col6a2Q02788 Ffar2-202ENSMUST00000163504 1913 ntAPPRIS P1 TSL 2 BASIC13.58□□□□□ -0.24
Col6a2Q02788 Slc22a18-201ENSMUST00000052348 1525 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Col6a2Q02788 Olfr61-202ENSMUST00000210241 1348 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.24
Col6a2Q02788 Gpr135-201ENSMUST00000050649 3150 ntAPPRIS P1 BASIC13.58□□□□□ -0.24
Col6a2Q02788 2610507B11Rik-201ENSMUST00000010421 7443 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Col6a2Q02788 Coro6-205ENSMUST00000108391 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Col6a2Q02788 0610006L08Rik-201ENSMUST00000205326 1589 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Col6a2Q02788 Phldb1-214ENSMUST00000147495 5424 ntAPPRIS P5 TSL 5 BASIC13.57□□□□□ -0.24
Col6a2Q02788 Steap2-203ENSMUST00000115425 4550 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Col6a2Q02788 Rad9a-201ENSMUST00000025740 2046 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Col6a2Q02788 Kdm2b-201ENSMUST00000031435 3532 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Col6a2Q02788 Ebf4-201ENSMUST00000110286 2670 ntAPPRIS P2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Col6a2Q02788 Tpm1-202ENSMUST00000034928 1824 ntTSL 5 BASIC13.57□□□□□ -0.24
Col6a2Q02788 Nek6-203ENSMUST00000112902 3147 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Col6a2Q02788 B4galt3-202ENSMUST00000111313 2098 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Col6a2Q02788 H2-Q6-202ENSMUST00000174699 2085 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
Col6a2Q02788 Gm10371-201ENSMUST00000127429 1411 ntTSL 2 BASIC13.57□□□□□ -0.24
Col6a2Q02788 Mrpl44-201ENSMUST00000027464 1424 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Col6a2Q02788 Pcdhga12-201ENSMUST00000044851 5080 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Col6a2Q02788 Ppp1r15a-202ENSMUST00000167273 2809 ntAPPRIS P1 TSL 2 BASIC13.57□□□□□ -0.24
Col6a2Q02788 Gstcd-202ENSMUST00000080583 2394 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Col6a2Q02788 Selenoh-202ENSMUST00000102647 654 ntAPPRIS P2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Col6a2Q02788 Gm5303-201ENSMUST00000117943 1252 ntBASIC13.57□□□□□ -0.24
Col6a2Q02788 Rpl9-203ENSMUST00000120094 680 ntAPPRIS P1 TSL 2 BASIC13.57□□□□□ -0.24
Col6a2Q02788 Mir1894-201ENSMUST00000122802 81 ntBASIC13.57□□□□□ -0.24
Col6a2Q02788 St6galnac6-209ENSMUST00000131229 1013 ntTSL 2 BASIC13.57□□□□□ -0.24
Col6a2Q02788 Rps19-ps13-201ENSMUST00000180504 441 ntBASIC13.57□□□□□ -0.24
Col6a2Q02788 Gm26894-201ENSMUST00000180828 1134 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Col6a2Q02788 Sox2ot-216ENSMUST00000200092 767 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Col6a2Q02788 Gm8463-201ENSMUST00000208573 613 ntBASIC13.57□□□□□ -0.24
Col6a2Q02788 Taldo1-201ENSMUST00000026576 1229 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Col6a2Q02788 Ppil3-201ENSMUST00000081677 896 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Col6a2Q02788 Dyrk3-201ENSMUST00000016670 3164 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Col6a2Q02788 Pcdh10-201ENSMUST00000166126 7081 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Col6a2Q02788 Khdrbs1-201ENSMUST00000066257 3738 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Col6a2Q02788 Las1l-201ENSMUST00000079987 2530 ntAPPRIS P2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Col6a2Q02788 Lsm14b-202ENSMUST00000058764 2566 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Col6a2Q02788 Smim14-205ENSMUST00000139122 4560 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Col6a2Q02788 Mmp21-201ENSMUST00000033278 1858 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Col6a2Q02788 Reep5-201ENSMUST00000006027 2894 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Col6a2Q02788 Actn4-201ENSMUST00000068045 3877 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Col6a2Q02788 Fggy-202ENSMUST00000079223 1891 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
Col6a2Q02788 Olfm1-202ENSMUST00000100244 2686 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Col6a2Q02788 Angptl7-201ENSMUST00000030840 2157 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Col6a2Q02788 Stk38-202ENSMUST00000119274 1939 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Col6a2Q02788 Phyh-201ENSMUST00000027975 1438 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Col6a2Q02788 Slc9a3-201ENSMUST00000036208 2490 ntAPPRIS P2 TSL 2 BASIC13.56□□□□□ -0.24
Col6a2Q02788 Slc25a22-202ENSMUST00000106006 2277 ntTSL 5 BASIC13.56□□□□□ -0.24
Col6a2Q02788 Sned1-201ENSMUST00000062202 9147 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Col6a2Q02788 Nfe2-207ENSMUST00000134554 1761 ntAPPRIS P1 TSL 2 BASIC13.56□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 43.7 ms