Protein–RNA interactions for Protein: P97459

Npas1, Neuronal PAS domain-containing protein 1, mousemouse

Predictions only

Length 594 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Npas1P97459 Qrfp-201ENSMUST00000057407 2927 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Npas1P97459 Twf2-204ENSMUST00000188650 1508 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Npas1P97459 Sun2-202ENSMUST00000089311 3709 ntAPPRIS P3 TSL 1 (best) BASIC11.43□□□□□ -0.58
Npas1P97459 Grm5-204ENSMUST00000155358 4500 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Npas1P97459 Pias3-202ENSMUST00000107076 2858 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Npas1P97459 Bach2-202ENSMUST00000108180 8882 ntAPPRIS P2 TSL 5 BASIC11.43□□□□□ -0.58
Npas1P97459 Col6a2-201ENSMUST00000001181 3949 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Npas1P97459 Gm5608-201ENSMUST00000210253 2290 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Npas1P97459 Exoc6b-203ENSMUST00000160197 5439 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Npas1P97459 Ubap2l-202ENSMUST00000064639 4073 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Npas1P97459 Ppp4r3b-201ENSMUST00000020755 5125 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Npas1P97459 Ncoa7-201ENSMUST00000068567 5105 ntAPPRIS P3 TSL 5 BASIC11.43□□□□□ -0.58
Npas1P97459 Islr-201ENSMUST00000041477 2223 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Npas1P97459 Nars2-201ENSMUST00000044466 3778 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Npas1P97459 Kdm2b-204ENSMUST00000118027 5062 ntAPPRIS ALT2 TSL 5 BASIC11.43□□□□□ -0.58
Npas1P97459 Eef1akmt3-201ENSMUST00000116231 2719 ntAPPRIS P1 TSL 5 BASIC11.43□□□□□ -0.58
Npas1P97459 Slc52a2-201ENSMUST00000023220 2700 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Npas1P97459 Luc7l-203ENSMUST00000119928 1441 ntAPPRIS ALT2 TSL 5 BASIC11.43□□□□□ -0.58
Npas1P97459 Fam214b-203ENSMUST00000107957 3234 ntAPPRIS P1 TSL 5 BASIC11.43□□□□□ -0.58
Npas1P97459 Oprm1-205ENSMUST00000078634 1695 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Npas1P97459 C230014O12Rik-201ENSMUST00000134921 2668 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Npas1P97459 Pbrm1-206ENSMUST00000112094 5154 ntAPPRIS P5 TSL 5 BASIC11.42□□□□□ -0.58
Npas1P97459 Gm19817-201ENSMUST00000199764 2132 ntBASIC11.42□□□□□ -0.58
Npas1P97459 Shroom1-202ENSMUST00000093114 2886 ntTSL 2 BASIC11.42□□□□□ -0.58
Npas1P97459 Atpaf2-201ENSMUST00000108721 1813 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Npas1P97459 Tmem9-201ENSMUST00000063719 1806 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Npas1P97459 Gpr107-201ENSMUST00000056433 6134 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Npas1P97459 Slc22a15-201ENSMUST00000106928 6573 ntAPPRIS P1 TSL 5 BASIC11.42□□□□□ -0.58
Npas1P97459 Trim29-201ENSMUST00000034511 2735 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Npas1P97459 Cd276-202ENSMUST00000165365 3603 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Npas1P97459 Crhr2-201ENSMUST00000003568 2695 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Npas1P97459 Hoxa13-202ENSMUST00000114416 769 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Npas1P97459 Meig1-203ENSMUST00000115082 603 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Npas1P97459 Ctcflos-201ENSMUST00000142165 469 ntTSL 3 BASIC11.42□□□□□ -0.58
Npas1P97459 Gm25927-201ENSMUST00000175058 117 ntBASIC11.42□□□□□ -0.58
Npas1P97459 Calcb-203ENSMUST00000182816 706 ntAPPRIS ALT2 TSL 5 BASIC11.42□□□□□ -0.58
Npas1P97459 Tmem52-201ENSMUST00000023920 932 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Npas1P97459 4930431F12Rik-201ENSMUST00000079389 429 ntTSL 5 BASIC11.42□□□□□ -0.58
Npas1P97459 Selenbp1-201ENSMUST00000090839 1712 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Npas1P97459 Selenbp2-201ENSMUST00000090848 1719 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Npas1P97459 Hnrnpf-210ENSMUST00000180341 1922 ntAPPRIS P1 BASIC11.42□□□□□ -0.58
Npas1P97459 Tfcp2-201ENSMUST00000009877 3250 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Npas1P97459 Wdr4-207ENSMUST00000171171 4153 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Npas1P97459 Rps6kb1-207ENSMUST00000154617 5531 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Npas1P97459 Ada-201ENSMUST00000017841 1688 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Npas1P97459 Dach2-201ENSMUST00000067219 2520 ntAPPRIS P3 TSL 1 (best) BASIC11.42□□□□□ -0.58
Npas1P97459 Phykpl-201ENSMUST00000020625 1609 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Npas1P97459 Pgpep1-201ENSMUST00000070173 4883 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Npas1P97459 Setd1a-202ENSMUST00000047157 5927 ntAPPRIS P1 TSL 5 BASIC11.42□□□□□ -0.58
Npas1P97459 Cdca5-201ENSMUST00000025704 2024 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Npas1P97459 Zfp536-203ENSMUST00000176114 4341 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Npas1P97459 Fen1-203ENSMUST00000142241 2152 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Npas1P97459 Acsf3-203ENSMUST00000212790 2171 ntAPPRIS P2 TSL 5 BASIC11.41□□□□□ -0.58
Npas1P97459 Lrrc25-201ENSMUST00000052437 1313 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Npas1P97459 Gm5763-201ENSMUST00000155951 1530 ntBASIC11.41□□□□□ -0.58
Npas1P97459 Fbxo8-202ENSMUST00000110322 1709 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Npas1P97459 Tfe3-204ENSMUST00000115677 2943 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Npas1P97459 Olfr648-202ENSMUST00000216612 2929 ntAPPRIS P1 TSL 2 BASIC11.41□□□□□ -0.58
Npas1P97459 Cacna2d1-201ENSMUST00000039370 3933 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Npas1P97459 Ptpn9-201ENSMUST00000034832 4101 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Npas1P97459 Insrr-201ENSMUST00000029711 5102 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Npas1P97459 Nrxn1-202ENSMUST00000072671 8118 ntTSL 5 BASIC11.41□□□□□ -0.58
Npas1P97459 Pcid2-201ENSMUST00000164416 2860 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Npas1P97459 Sugp1-201ENSMUST00000011450 2681 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Npas1P97459 Rab11fip5-201ENSMUST00000060837 4035 ntAPPRIS P3 TSL 1 (best) BASIC11.41□□□□□ -0.58
Npas1P97459 Rhno1-202ENSMUST00000112151 1108 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Npas1P97459 Bex1-203ENSMUST00000113120 718 ntAPPRIS P1 TSL 3 BASIC11.41□□□□□ -0.58
Npas1P97459 Gm12536-201ENSMUST00000129102 358 ntTSL 2 BASIC11.41□□□□□ -0.58
Npas1P97459 Tmem255b-201ENSMUST00000167071 1138 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Npas1P97459 Gm10275-202ENSMUST00000168697 495 ntBASIC11.41□□□□□ -0.58
Npas1P97459 C130032M10Rik-201ENSMUST00000180393 728 ntAPPRIS P1 BASIC11.41□□□□□ -0.58
Npas1P97459 Gm26549-201ENSMUST00000181112 1209 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Npas1P97459 Mir8098-201ENSMUST00000184011 137 ntBASIC11.41□□□□□ -0.58
Npas1P97459 Gm27301-201ENSMUST00000184012 127 ntBASIC11.41□□□□□ -0.58
Npas1P97459 Gm17971-201ENSMUST00000190239 806 ntBASIC11.41□□□□□ -0.58
Npas1P97459 2010010A06Rik-203ENSMUST00000190465 650 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Npas1P97459 AC084391.1-201ENSMUST00000200651 141 ntBASIC11.41□□□□□ -0.58
Npas1P97459 Gm10459-201ENSMUST00000202708 1155 ntBASIC11.41□□□□□ -0.58
Npas1P97459 Idh2-207ENSMUST00000206714 392 ntTSL 3 BASIC11.41□□□□□ -0.58
Npas1P97459 Gm45747-201ENSMUST00000212203 999 ntBASIC11.41□□□□□ -0.58
Npas1P97459 Pde6g-201ENSMUST00000026452 900 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Npas1P97459 Izumo1r-201ENSMUST00000034409 1291 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Npas1P97459 Atg101-201ENSMUST00000048393 1230 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Npas1P97459 Rogdi-202ENSMUST00000090453 652 ntTSL 5 BASIC11.41□□□□□ -0.58
Npas1P97459 Gm10275-201ENSMUST00000092620 635 ntBASIC11.41□□□□□ -0.58
Npas1P97459 Hdac10-201ENSMUST00000082197 2412 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Npas1P97459 Rnf152-202ENSMUST00000172299 8406 ntAPPRIS P1 TSL 2 BASIC11.41□□□□□ -0.58
Npas1P97459 Gemin4-201ENSMUST00000102500 3540 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Npas1P97459 Plin3-201ENSMUST00000019726 2159 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Npas1P97459 Sox7-201ENSMUST00000079652 3299 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Npas1P97459 Gm26604-201ENSMUST00000180926 1766 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Npas1P97459 Mroh5-202ENSMUST00000110021 2145 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Npas1P97459 Ralgps2-211ENSMUST00000190648 2498 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Npas1P97459 Nup160-201ENSMUST00000057481 5684 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Npas1P97459 Gjb1-202ENSMUST00000119080 1513 ntAPPRIS P1 TSL 3 BASIC11.4□□□□□ -0.58
Npas1P97459 Zfp24-203ENSMUST00000153337 1513 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Npas1P97459 Gm16976-201ENSMUST00000099718 1894 ntTSL 5 BASIC11.4□□□□□ -0.58
Npas1P97459 Pphln1-202ENSMUST00000068457 3816 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Npas1P97459 Ncan-201ENSMUST00000002412 7195 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Npas1P97459 Tssk4-202ENSMUST00000164809 1686 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Retrieved 100 of 76,532 protein–RNA pairs in 66.5 ms