Protein–RNA interactions for Protein: P97445

Cacna1a, Voltage-dependent P/Q-type calcium channel subunit alpha-1A, mousemouse

Predictions only

Length 2,368 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cacna1aP97445 Atg4d-201ENSMUST00000065005 5951 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Cacna1aP97445 Csnk1g2-202ENSMUST00000085435 1825 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Cacna1aP97445 Zfp786-201ENSMUST00000058844 3191 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Cacna1aP97445 Phf8-204ENSMUST00000112666 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Cacna1aP97445 Gm16685-201ENSMUST00000181286 1592 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Cacna1aP97445 Scrt1-201ENSMUST00000096365 4010 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Cacna1aP97445 Mtus2-204ENSMUST00000110514 1532 ntTSL 5 BASIC12.56□□□□□ -0.4
Cacna1aP97445 Lmnb1-201ENSMUST00000025486 2843 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Cacna1aP97445 Fh1-201ENSMUST00000027810 2636 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Cacna1aP97445 Fam84b-201ENSMUST00000100635 5565 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Cacna1aP97445 Gm13425-201ENSMUST00000145389 5391 ntTSL 3 BASIC12.56□□□□□ -0.4
Cacna1aP97445 Rfc5-201ENSMUST00000086461 2796 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Cacna1aP97445 Atp13a2-203ENSMUST00000127833 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Cacna1aP97445 Rpl15-203ENSMUST00000100799 802 ntAPPRIS P1 TSL 2 BASIC12.56□□□□□ -0.4
Cacna1aP97445 Gm14381-201ENSMUST00000122105 414 ntBASIC12.56□□□□□ -0.4
Cacna1aP97445 Gm6407-201ENSMUST00000176468 549 ntBASIC12.56□□□□□ -0.4
Cacna1aP97445 Gm7467-201ENSMUST00000185173 652 ntBASIC12.56□□□□□ -0.4
Cacna1aP97445 Ggt5-203ENSMUST00000189972 648 ntTSL 3 BASIC12.56□□□□□ -0.4
Cacna1aP97445 Gm4935-201ENSMUST00000221316 1198 ntBASIC12.56□□□□□ -0.4
Cacna1aP97445 Nkiras2-202ENSMUST00000051947 831 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Cacna1aP97445 Gm9955-201ENSMUST00000067987 309 ntAPPRIS P1 BASIC12.56□□□□□ -0.4
Cacna1aP97445 Cbx3-ps1-201ENSMUST00000091539 545 ntBASIC12.56□□□□□ -0.4
Cacna1aP97445 Fam76a-201ENSMUST00000030696 3053 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Cacna1aP97445 Trappc12-203ENSMUST00000170994 2818 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Cacna1aP97445 Neu2-203ENSMUST00000164128 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Cacna1aP97445 Ubash3b-201ENSMUST00000044155 6354 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Cacna1aP97445 Tox2-202ENSMUST00000109428 2947 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
Cacna1aP97445 Casp7-201ENSMUST00000026062 2350 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Cacna1aP97445 Dip2b-202ENSMUST00000100203 8914 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Cacna1aP97445 Gk5-202ENSMUST00000122383 4455 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Cacna1aP97445 Myo9b-201ENSMUST00000071935 7082 ntAPPRIS P3 TSL 5 BASIC12.55□□□□□ -0.4
Cacna1aP97445 Dao-203ENSMUST00000161610 1633 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Cacna1aP97445 Ppt2-210ENSMUST00000171376 1750 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Cacna1aP97445 Miga1-204ENSMUST00000199334 4024 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Cacna1aP97445 Gm45630-201ENSMUST00000210243 1911 ntBASIC12.55□□□□□ -0.4
Cacna1aP97445 Gm14350-201ENSMUST00000116642 640 ntBASIC12.55□□□□□ -0.4
Cacna1aP97445 Polr3c-202ENSMUST00000125183 923 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Cacna1aP97445 Mymx-203ENSMUST00000178858 804 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Cacna1aP97445 Gm29396-201ENSMUST00000185659 716 ntBASIC12.55□□□□□ -0.4
Cacna1aP97445 Plin1-203ENSMUST00000205413 1294 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Cacna1aP97445 Gm18935-201ENSMUST00000212692 664 ntBASIC12.55□□□□□ -0.4
Cacna1aP97445 Zfp36l1-203ENSMUST00000218835 292 ntTSL 3 BASIC12.55□□□□□ -0.4
Cacna1aP97445 CT030704.2-201ENSMUST00000228887 494 ntBASIC12.55□□□□□ -0.4
Cacna1aP97445 Gm16796-201ENSMUST00000126086 3172 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Cacna1aP97445 Med14-202ENSMUST00000096495 6963 ntAPPRIS P2 TSL 5 BASIC12.55□□□□□ -0.4
Cacna1aP97445 Tagap1-201ENSMUST00000063683 2358 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Cacna1aP97445 Gm9742-201ENSMUST00000165220 1553 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Cacna1aP97445 Gnpda2-201ENSMUST00000031117 1894 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
Cacna1aP97445 Lin54-201ENSMUST00000046154 4451 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Cacna1aP97445 Lrp11-203ENSMUST00000130590 3220 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Cacna1aP97445 Lrp4-201ENSMUST00000028689 7926 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Cacna1aP97445 Pdhx-202ENSMUST00000111183 2078 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Cacna1aP97445 Camk2g-217ENSMUST00000226630 1937 ntBASIC12.55□□□□□ -0.4
Cacna1aP97445 Cpeb2-205ENSMUST00000169035 7050 ntAPPRIS P2 TSL 5 BASIC12.55□□□□□ -0.4
Cacna1aP97445 Ccdc88c-202ENSMUST00000085096 6313 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
Cacna1aP97445 Tnnt3-217ENSMUST00000105957 1028 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
Cacna1aP97445 Rab15-204ENSMUST00000122419 856 ntTSL 5 BASIC12.55□□□□□ -0.4
Cacna1aP97445 Asgr1-201ENSMUST00000018699 1259 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
Cacna1aP97445 Gm37497-201ENSMUST00000195830 798 ntBASIC12.55□□□□□ -0.4
Cacna1aP97445 Rfxank-203ENSMUST00000212320 1121 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Cacna1aP97445 Gm36264-202ENSMUST00000221989 1142 ntTSL 5 BASIC12.55□□□□□ -0.4
Cacna1aP97445 Pin1rt1-201ENSMUST00000099659 1172 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Cacna1aP97445 Snph-204ENSMUST00000109877 3367 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Cacna1aP97445 Impad1-201ENSMUST00000084949 6543 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Cacna1aP97445 Ctsk-201ENSMUST00000015664 1512 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cacna1aP97445 Anks1b-213ENSMUST00000182284 2607 ntTSL 5 BASIC12.54□□□□□ -0.4
Cacna1aP97445 Aqp11-205ENSMUST00000206389 3737 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cacna1aP97445 Vav1-201ENSMUST00000005889 2963 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cacna1aP97445 Saxo1-201ENSMUST00000030216 1892 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cacna1aP97445 Tcf4-248ENSMUST00000202354 2120 ntTSL 5 BASIC12.54□□□□□ -0.4
Cacna1aP97445 Tcf4-257ENSMUST00000202772 2125 ntTSL 5 BASIC12.54□□□□□ -0.4
Cacna1aP97445 Pde4d-203ENSMUST00000117420 1955 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Cacna1aP97445 Bag6-202ENSMUST00000166426 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cacna1aP97445 Opn4-201ENSMUST00000022331 2156 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cacna1aP97445 Taf6l-202ENSMUST00000010249 848 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Cacna1aP97445 Trav4d-3-201ENSMUST00000103592 331 ntAPPRIS P1 BASIC12.54□□□□□ -0.4
Cacna1aP97445 Trav4d-4-201ENSMUST00000103600 354 ntAPPRIS P1 BASIC12.54□□□□□ -0.4
Cacna1aP97445 Trav4n-3-201ENSMUST00000103618 331 ntAPPRIS P1 BASIC12.54□□□□□ -0.4
Cacna1aP97445 Trav4n-4-201ENSMUST00000103627 354 ntAPPRIS P1 BASIC12.54□□□□□ -0.4
Cacna1aP97445 Trav4-3-201ENSMUST00000103655 411 ntAPPRIS P1 BASIC12.54□□□□□ -0.4
Cacna1aP97445 Trav4-4-dv10-201ENSMUST00000103663 361 ntAPPRIS P1 BASIC12.54□□□□□ -0.4
Cacna1aP97445 Emd-204ENSMUST00000119197 768 ntTSL 3 BASIC12.54□□□□□ -0.4
Cacna1aP97445 Gm11751-201ENSMUST00000126187 460 ntTSL 3 BASIC12.54□□□□□ -0.4
Cacna1aP97445 Gm13070-201ENSMUST00000146532 768 ntTSL 5 BASIC12.54□□□□□ -0.4
Cacna1aP97445 Tmcc1-205ENSMUST00000173031 1024 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Cacna1aP97445 Tmem267-202ENSMUST00000176171 880 ntAPPRIS P1 TSL 2 BASIC12.54□□□□□ -0.4
Cacna1aP97445 Gm3809-201ENSMUST00000180973 1006 ntBASIC12.54□□□□□ -0.4
Cacna1aP97445 Gm27320-201ENSMUST00000184892 109 ntBASIC12.54□□□□□ -0.4
Cacna1aP97445 Gm6621-201ENSMUST00000193251 772 ntBASIC12.54□□□□□ -0.4
Cacna1aP97445 Tyms-ps-201ENSMUST00000219550 915 ntBASIC12.54□□□□□ -0.4
Cacna1aP97445 Ceacam10-201ENSMUST00000038069 1048 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cacna1aP97445 Olfr222-201ENSMUST00000071943 1115 ntAPPRIS P1 BASIC12.54□□□□□ -0.4
Cacna1aP97445 Syt8-204ENSMUST00000118276 1503 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cacna1aP97445 Atp2a3-201ENSMUST00000021142 4593 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cacna1aP97445 Ifi35-201ENSMUST00000010502 1362 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cacna1aP97445 Shank3-201ENSMUST00000039074 7131 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cacna1aP97445 Eloa-201ENSMUST00000030427 4708 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cacna1aP97445 Slc31a2-201ENSMUST00000084530 1820 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cacna1aP97445 1300002E11Rik-202ENSMUST00000181780 1650 ntTSL 2 BASIC12.54□□□□□ -0.4
Cacna1aP97445 Gm10040-201ENSMUST00000080726 1662 ntBASIC12.54□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 43.4 ms