Protein–RNA interactions for Protein: P97334

Nkx2-3, Homeobox protein Nkx-2.3, mousemouse

Predictions only

Length 362 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-3P97334 Ctbp2-209ENSMUST00000166439 1997 ntTSL 1 (best) BASIC17■□□□□ 0.31
Nkx2-3P97334 Plch2-208ENSMUST00000145662 1818 ntTSL 1 (best) BASIC17■□□□□ 0.31
Nkx2-3P97334 Skor1-202ENSMUST00000116613 3591 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
Nkx2-3P97334 Tufm-201ENSMUST00000098048 1679 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Nkx2-3P97334 Sybu-202ENSMUST00000110267 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
Nkx2-3P97334 A830018L16Rik-208ENSMUST00000171690 6158 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
Nkx2-3P97334 Hipk2-206ENSMUST00000161779 7684 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
Nkx2-3P97334 Apol6-206ENSMUST00000149569 2315 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Nkx2-3P97334 Pccb-201ENSMUST00000035116 2320 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Nkx2-3P97334 Anxa4-201ENSMUST00000001187 2002 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Nkx2-3P97334 Ephb1-201ENSMUST00000035129 4667 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Nkx2-3P97334 Fpr1-201ENSMUST00000061516 1324 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Nkx2-3P97334 Cmip-201ENSMUST00000095172 2276 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Nkx2-3P97334 Pdcl3-201ENSMUST00000027247 3914 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Nkx2-3P97334 Zbed4-201ENSMUST00000041297 5425 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Nkx2-3P97334 Chodl-203ENSMUST00000114216 1550 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Nkx2-3P97334 Atxn7-201ENSMUST00000022257 6853 ntAPPRIS P2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Nkx2-3P97334 Glod4-201ENSMUST00000017430 1434 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Nkx2-3P97334 Tomm5-204ENSMUST00000107810 639 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Nkx2-3P97334 Gm15370-201ENSMUST00000117158 253 ntBASIC16.99■□□□□ 0.31
Nkx2-3P97334 Gm32025-201ENSMUST00000217960 307 ntBASIC16.99■□□□□ 0.31
Nkx2-3P97334 Slfn2-201ENSMUST00000038038 1664 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Nkx2-3P97334 Amhr2-201ENSMUST00000023809 1938 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Nkx2-3P97334 Rbm47-201ENSMUST00000094756 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Nkx2-3P97334 Zfp410-201ENSMUST00000045931 2597 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Nkx2-3P97334 Ankrd6-202ENSMUST00000084748 4354 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
Nkx2-3P97334 Gtf3c5-202ENSMUST00000113889 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Nkx2-3P97334 Osm-201ENSMUST00000075221 2272 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Nkx2-3P97334 Micu1-202ENSMUST00000092508 2294 ntAPPRIS ALT1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Nkx2-3P97334 Avl9-201ENSMUST00000031805 6670 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Nkx2-3P97334 Cdc42ep1-201ENSMUST00000059619 2542 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Nkx2-3P97334 Adam15-201ENSMUST00000029676 2975 ntAPPRIS P4 TSL 1 (best) BASIC16.98■□□□□ 0.31
Nkx2-3P97334 Dlx5-202ENSMUST00000142635 1324 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Nkx2-3P97334 Kcnab2-203ENSMUST00000159186 1552 ntTSL 5 BASIC16.98■□□□□ 0.31
Nkx2-3P97334 Olfr533-203ENSMUST00000215308 2345 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
Nkx2-3P97334 Irak1-204ENSMUST00000114352 3825 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
Nkx2-3P97334 Gm26702-201ENSMUST00000181730 4570 ntTSL 5 BASIC16.98■□□□□ 0.31
Nkx2-3P97334 Cchcr1-202ENSMUST00000164242 2656 ntAPPRIS P2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Nkx2-3P97334 Blzf1-203ENSMUST00000120447 2430 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Nkx2-3P97334 Csk-209ENSMUST00000217314 2162 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Nkx2-3P97334 Sox21-201ENSMUST00000170662 3799 ntAPPRIS P1 BASIC16.98■□□□□ 0.31
Nkx2-3P97334 Wdr90-205ENSMUST00000176923 5666 ntAPPRIS ALT2 TSL 5 BASIC16.98■□□□□ 0.31
Nkx2-3P97334 Ppt1-201ENSMUST00000030412 2381 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Nkx2-3P97334 Gm24255-201ENSMUST00000104481 128 ntBASIC16.98■□□□□ 0.31
Nkx2-3P97334 Pin4-201ENSMUST00000113627 489 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Nkx2-3P97334 Gm15236-201ENSMUST00000117309 379 ntBASIC16.98■□□□□ 0.31
Nkx2-3P97334 Fzr1-202ENSMUST00000118812 1215 ntTSL 5 BASIC16.98■□□□□ 0.31
Nkx2-3P97334 4933406I18Rik-201ENSMUST00000124673 905 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Nkx2-3P97334 Gm15501-201ENSMUST00000133910 849 ntTSL 3 BASIC16.98■□□□□ 0.31
Nkx2-3P97334 Tead1-207ENSMUST00000165036 1248 ntTSL 5 BASIC16.98■□□□□ 0.31
Nkx2-3P97334 Tead1-212ENSMUST00000171197 1074 ntTSL 5 BASIC16.98■□□□□ 0.31
Nkx2-3P97334 Tmcc1-205ENSMUST00000173031 1024 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Nkx2-3P97334 Cdk3-ps-202ENSMUST00000174177 915 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
Nkx2-3P97334 Tmem108-206ENSMUST00000215136 724 ntTSL 3 BASIC16.98■□□□□ 0.31
Nkx2-3P97334 AC160029.2-201ENSMUST00000218285 548 ntTSL 3 BASIC16.98■□□□□ 0.31
Nkx2-3P97334 Il12rb1-205ENSMUST00000212657 2741 ntAPPRIS ALT2 TSL 5 BASIC16.98■□□□□ 0.31
Nkx2-3P97334 Ube2g1-203ENSMUST00000138247 3931 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Nkx2-3P97334 Scrt1-201ENSMUST00000096365 4010 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Nkx2-3P97334 Cidec-201ENSMUST00000032416 1703 ntAPPRIS P2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Nkx2-3P97334 Rfx5-202ENSMUST00000107253 4367 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Nkx2-3P97334 Pcdh1-203ENSMUST00000160721 5416 ntTSL 5 BASIC16.98■□□□□ 0.31
Nkx2-3P97334 Mmp2-201ENSMUST00000034187 3078 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Nkx2-3P97334 Rbmx-203ENSMUST00000114730 2019 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
Nkx2-3P97334 Adgrd2-ps-201ENSMUST00000118797 2662 ntBASIC16.97■□□□□ 0.31
Nkx2-3P97334 Egr2-203ENSMUST00000127820 2665 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
Nkx2-3P97334 Npepps-215ENSMUST00000167806 2307 ntTSL 5 BASIC16.97■□□□□ 0.31
Nkx2-3P97334 Gm16278-201ENSMUST00000148064 2071 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Nkx2-3P97334 Cep152-201ENSMUST00000089776 5768 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Nkx2-3P97334 Mettl17-201ENSMUST00000047899 1623 ntAPPRIS P2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Nkx2-3P97334 Nek7-201ENSMUST00000027642 3737 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Nkx2-3P97334 Inca1-203ENSMUST00000108542 1080 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
Nkx2-3P97334 Pole-203ENSMUST00000112482 747 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Nkx2-3P97334 Gstt1-202ENSMUST00000120177 1105 ntTSL 2 BASIC16.97■□□□□ 0.31
Nkx2-3P97334 Gm13297-201ENSMUST00000120205 934 ntBASIC16.97■□□□□ 0.31
Nkx2-3P97334 Gm28693-202ENSMUST00000190758 331 ntBASIC16.97■□□□□ 0.31
Nkx2-3P97334 AC159747.1-201ENSMUST00000219903 265 ntBASIC16.97■□□□□ 0.31
Nkx2-3P97334 Mfsd4b5-205ENSMUST00000170579 1554 ntAPPRIS P1 TSL 2 BASIC16.97■□□□□ 0.31
Nkx2-3P97334 Dusp15-203ENSMUST00000123121 2993 ntAPPRIS P1 TSL 3 BASIC16.97■□□□□ 0.31
Nkx2-3P97334 Hnrnpc-211ENSMUST00000228748 1691 ntAPPRIS P5 BASIC16.97■□□□□ 0.31
Nkx2-3P97334 Zfp672-204ENSMUST00000108829 3094 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Nkx2-3P97334 Rad54b-202ENSMUST00000095145 2403 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Nkx2-3P97334 Etnk1-201ENSMUST00000032413 6433 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Nkx2-3P97334 Myh10-204ENSMUST00000108673 1315 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Nkx2-3P97334 Dzip1-201ENSMUST00000004055 4079 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Nkx2-3P97334 Slc4a1ap-213ENSMUST00000202950 2499 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.31
Nkx2-3P97334 Nat8f7-201ENSMUST00000160534 1822 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
Nkx2-3P97334 Wwox-201ENSMUST00000004756 2244 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Nkx2-3P97334 Bmp3-202ENSMUST00000197143 2739 ntTSL 2 BASIC16.96■□□□□ 0.31
Nkx2-3P97334 Amz2-202ENSMUST00000092500 2816 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.31
Nkx2-3P97334 Nfxl1-202ENSMUST00000087216 3712 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
Nkx2-3P97334 Snord83b-201ENSMUST00000104546 94 ntBASIC16.96■□□□□ 0.31
Nkx2-3P97334 Pisd-ps1-203ENSMUST00000145164 789 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Nkx2-3P97334 Gm2991-201ENSMUST00000173338 480 ntBASIC16.96■□□□□ 0.31
Nkx2-3P97334 Gm20404-201ENSMUST00000174032 621 ntTSL 3 BASIC16.96■□□□□ 0.31
Nkx2-3P97334 Gm18827-201ENSMUST00000188341 790 ntBASIC16.96■□□□□ 0.31
Nkx2-3P97334 Gm37933-201ENSMUST00000193964 981 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Nkx2-3P97334 Gm31651-201ENSMUST00000198864 560 ntTSL 3 BASIC16.96■□□□□ 0.31
Nkx2-3P97334 Gm19163-201ENSMUST00000223313 780 ntBASIC16.96■□□□□ 0.31
Nkx2-3P97334 Morn3-201ENSMUST00000031437 1128 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Nkx2-3P97334 Olfr1423-201ENSMUST00000087831 933 ntAPPRIS P1 BASIC16.96■□□□□ 0.31
Retrieved 100 of 76,532 protein–RNA pairs in 35.6 ms