Protein–RNA interactions for Protein: P55066

Ncan, Neurocan core protein, mousemouse

Predictions only

Length 1,268 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NcanP55066 Plp2-201ENSMUST00000033486 1157 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
NcanP55066 Gm5129-201ENSMUST00000065372 300 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
NcanP55066 Gm19221-201ENSMUST00000221827 1477 ntBASIC14.22□□□□□ -0.13
NcanP55066 Acot7-202ENSMUST00000075363 1457 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
NcanP55066 Tmx4-201ENSMUST00000038228 5488 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
NcanP55066 Csnk2a2-201ENSMUST00000056919 3773 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
NcanP55066 Mfsd6l-201ENSMUST00000053211 2060 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
NcanP55066 Clip2-202ENSMUST00000100647 4994 ntAPPRIS P4 TSL 1 (best) BASIC14.22□□□□□ -0.13
NcanP55066 Sbno2-204ENSMUST00000217972 2462 ntTSL 2 BASIC14.22□□□□□ -0.13
NcanP55066 Fubp3-202ENSMUST00000113482 3268 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
NcanP55066 Gm29340-201ENSMUST00000188763 3854 ntBASIC14.22□□□□□ -0.13
NcanP55066 6330537M06Rik-201ENSMUST00000212384 1642 ntBASIC14.22□□□□□ -0.13
NcanP55066 Zmym3-206ENSMUST00000120107 5882 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
NcanP55066 Nek3-201ENSMUST00000033865 2021 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
NcanP55066 Abl1-201ENSMUST00000028190 5794 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
NcanP55066 Slc4a2-201ENSMUST00000080067 4179 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
NcanP55066 B3gnt7-201ENSMUST00000113306 2582 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
NcanP55066 Gm16279-201ENSMUST00000149452 2945 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
NcanP55066 4833439L19Rik-201ENSMUST00000026989 2727 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
NcanP55066 Nme8-202ENSMUST00000091763 2122 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
NcanP55066 Stox2-208ENSMUST00000211737 4573 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
NcanP55066 Rtn3-201ENSMUST00000025667 2841 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
NcanP55066 Adgrl1-201ENSMUST00000045393 5643 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
NcanP55066 Wt1-202ENSMUST00000111099 2441 ntTSL 5 BASIC14.21□□□□□ -0.13
NcanP55066 Wac-215ENSMUST00000171042 2205 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
NcanP55066 Etfdh-201ENSMUST00000029386 2377 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
NcanP55066 Gm25880-201ENSMUST00000104331 132 ntBASIC14.21□□□□□ -0.13
NcanP55066 Mrpl55-203ENSMUST00000108785 792 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
NcanP55066 Gm14965-201ENSMUST00000124118 565 ntTSL 2 BASIC14.21□□□□□ -0.13
NcanP55066 Tmem190-201ENSMUST00000013235 589 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
NcanP55066 Anapc16-203ENSMUST00000182152 847 ntTSL 2 BASIC14.21□□□□□ -0.13
NcanP55066 Gm42779-201ENSMUST00000198807 406 ntBASIC14.21□□□□□ -0.13
NcanP55066 9530020I12Rik-203ENSMUST00000219371 819 ntTSL 3 BASIC14.21□□□□□ -0.13
NcanP55066 Nppc-201ENSMUST00000027449 1042 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
NcanP55066 Psmb2-201ENSMUST00000030642 859 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
NcanP55066 Cmtm2a-201ENSMUST00000034344 1081 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.13
NcanP55066 n-R5s77-201ENSMUST00000083757 119 ntBASIC14.21□□□□□ -0.13
NcanP55066 Vav1-203ENSMUST00000112870 2743 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
NcanP55066 Rai2-202ENSMUST00000112338 2165 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
NcanP55066 Slc6a17-208ENSMUST00000169449 6322 ntAPPRIS ALT1 TSL 1 (best) BASIC14.21□□□□□ -0.13
NcanP55066 Slc6a17-201ENSMUST00000029499 6308 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
NcanP55066 Unc5d-204ENSMUST00000210785 3404 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
NcanP55066 Rnf168-203ENSMUST00000171474 4460 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.13
NcanP55066 Sorbs1-213ENSMUST00000225153 3589 ntAPPRIS P4 BASIC14.21□□□□□ -0.13
NcanP55066 Vps51-204ENSMUST00000159832 3048 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
NcanP55066 Mapk7-201ENSMUST00000079080 3019 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
NcanP55066 Dlgap4-204ENSMUST00000109566 1595 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.14
NcanP55066 Tmem17-201ENSMUST00000059319 1568 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
NcanP55066 Taf7l-201ENSMUST00000009740 1933 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
NcanP55066 Rai1-201ENSMUST00000064190 7348 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
NcanP55066 Gm38049-201ENSMUST00000195698 1372 ntBASIC14.21□□□□□ -0.14
NcanP55066 Camk2d-221ENSMUST00000171289 2217 ntTSL 5 BASIC14.21□□□□□ -0.14
NcanP55066 Cpsf6-206ENSMUST00000176670 2227 ntTSL 5 BASIC14.21□□□□□ -0.14
NcanP55066 Cpsf6-207ENSMUST00000176686 2200 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
NcanP55066 Tbx15-201ENSMUST00000029462 3566 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
NcanP55066 Rnf38-203ENSMUST00000102934 5240 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
NcanP55066 Zbtb16-202ENSMUST00000216150 2505 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
NcanP55066 Rufy3-205ENSMUST00000198965 3536 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
NcanP55066 Dnajc30-201ENSMUST00000071263 1661 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
NcanP55066 Tpd52-205ENSMUST00000120143 6317 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
NcanP55066 Syt10-201ENSMUST00000029441 1845 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
NcanP55066 Dok7-201ENSMUST00000050709 2498 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
NcanP55066 Scube2-203ENSMUST00000106729 3563 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
NcanP55066 Dpm1-209ENSMUST00000154111 2293 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
NcanP55066 Hs3st5-201ENSMUST00000058738 3078 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
NcanP55066 Aamp-202ENSMUST00000178235 1756 ntAPPRIS ALT1 TSL 5 BASIC14.2□□□□□ -0.14
NcanP55066 Pex2-202ENSMUST00000071280 1777 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
NcanP55066 Prkar2b-202ENSMUST00000036497 3378 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
NcanP55066 Gm11667-201ENSMUST00000119828 486 ntBASIC14.2□□□□□ -0.14
NcanP55066 Nr2f1-203ENSMUST00000127137 991 ntTSL 5 BASIC14.2□□□□□ -0.14
NcanP55066 Zfp637-210ENSMUST00000164472 1098 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
NcanP55066 1700031P21Rik-203ENSMUST00000191400 466 ntTSL 3 BASIC14.2□□□□□ -0.14
NcanP55066 Tmem176b-206ENSMUST00000203355 1202 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
NcanP55066 4930502A04Rik-201ENSMUST00000214059 865 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
NcanP55066 H2-Oa-201ENSMUST00000025192 1088 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
NcanP55066 Pga5-201ENSMUST00000025647 1417 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
NcanP55066 Slit1-201ENSMUST00000025993 5045 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
NcanP55066 9030612E09Rik-201ENSMUST00000053792 1859 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
NcanP55066 Cep152-201ENSMUST00000089776 5768 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
NcanP55066 Celf1-201ENSMUST00000005643 4830 ntAPPRIS P4 TSL 5 BASIC14.2□□□□□ -0.14
NcanP55066 Tgfb2-201ENSMUST00000045288 5116 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
NcanP55066 Tufm-201ENSMUST00000098048 1679 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
NcanP55066 Mapt-203ENSMUST00000106989 2250 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
NcanP55066 Mapk9-205ENSMUST00000109179 4682 ntTSL 5 BASIC14.2□□□□□ -0.14
NcanP55066 Mapk9-209ENSMUST00000164643 4682 ntTSL 5 BASIC14.2□□□□□ -0.14
NcanP55066 Mapk9-210ENSMUST00000178543 4677 ntAPPRIS ALT1 TSL 5 BASIC14.2□□□□□ -0.14
NcanP55066 Slc43a1-201ENSMUST00000028469 2539 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
NcanP55066 Cstf2-203ENSMUST00000113287 3661 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
NcanP55066 Arntl-201ENSMUST00000047321 2908 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
NcanP55066 Npnt-206ENSMUST00000117811 4532 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
NcanP55066 Knop1-205ENSMUST00000116280 5382 ntAPPRIS P3 TSL 5 BASIC14.19□□□□□ -0.14
NcanP55066 Pdzd4-202ENSMUST00000114438 3625 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
NcanP55066 Aldh3b1-201ENSMUST00000051803 1875 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
NcanP55066 Taz-201ENSMUST00000069722 1851 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
NcanP55066 Cend1-202ENSMUST00000124444 1733 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
NcanP55066 P4hb-201ENSMUST00000026122 2861 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
NcanP55066 Trappc10-201ENSMUST00000000384 5047 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
NcanP55066 Inpp5f-201ENSMUST00000043138 4734 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
NcanP55066 Gm12795-201ENSMUST00000117594 539 ntBASIC14.19□□□□□ -0.14
NcanP55066 Gm16555-201ENSMUST00000159971 1199 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 48.9 ms