Protein–RNA interactions for Protein: P50404

Sftpd, Pulmonary surfactant-associated protein D, mousemouse

Predictions only

Length 374 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SftpdP50404 Scp2-201ENSMUST00000030340 2640 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
SftpdP50404 Fam217a-204ENSMUST00000225242 1811 ntAPPRIS ALT2 BASIC14.34□□□□□ -0.11
SftpdP50404 Slc6a7-201ENSMUST00000025520 3342 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
SftpdP50404 Gdf10-201ENSMUST00000168727 5210 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
SftpdP50404 Plcd1-203ENSMUST00000214470 2706 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
SftpdP50404 Gtf3c5-201ENSMUST00000028157 2739 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
SftpdP50404 Gm7488-201ENSMUST00000117148 684 ntBASIC14.34□□□□□ -0.11
SftpdP50404 Gm12485-201ENSMUST00000119641 291 ntBASIC14.34□□□□□ -0.11
SftpdP50404 Rpl34-203ENSMUST00000133802 711 ntTSL 2 BASIC14.34□□□□□ -0.11
SftpdP50404 Gm20499-201ENSMUST00000140374 444 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
SftpdP50404 Il11-202ENSMUST00000163481 990 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
SftpdP50404 Synj2bp-205ENSMUST00000169158 691 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
SftpdP50404 Esd-207ENSMUST00000176957 1117 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
SftpdP50404 Gm5866-201ENSMUST00000177881 973 ntBASIC14.34□□□□□ -0.11
SftpdP50404 Gm43691-201ENSMUST00000196625 697 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
SftpdP50404 Gm31816-201ENSMUST00000209388 1294 ntTSL 5 BASIC14.34□□□□□ -0.11
SftpdP50404 Gm32926-202ENSMUST00000215162 1176 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
SftpdP50404 Rpp21-201ENSMUST00000025319 729 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
SftpdP50404 Olfr1410-201ENSMUST00000079790 969 ntTSL 5 BASIC14.34□□□□□ -0.11
SftpdP50404 Fbxl19-202ENSMUST00000186116 3641 ntTSL 5 BASIC14.34□□□□□ -0.11
SftpdP50404 Gm13016-201ENSMUST00000126252 1720 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
SftpdP50404 Steap2-201ENSMUST00000015797 3657 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
SftpdP50404 Sgce-207ENSMUST00000126151 1522 ntTSL 5 BASIC14.34□□□□□ -0.11
SftpdP50404 St6gal2-202ENSMUST00000086878 2606 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
SftpdP50404 Rap1gap2-202ENSMUST00000102521 6565 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
SftpdP50404 Olfr61-202ENSMUST00000210241 1348 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
SftpdP50404 Sgce-204ENSMUST00000115577 1776 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
SftpdP50404 Eno1b-201ENSMUST00000076155 1757 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
SftpdP50404 Thumpd1-201ENSMUST00000033236 2689 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
SftpdP50404 Jun-201ENSMUST00000107094 3189 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
SftpdP50404 Ctps-201ENSMUST00000030381 2705 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
SftpdP50404 Usp19-201ENSMUST00000006854 4791 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
SftpdP50404 Uhrf1bp1l-201ENSMUST00000020112 6448 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
SftpdP50404 Slc52a3-202ENSMUST00000109858 2094 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
SftpdP50404 Nfasc-201ENSMUST00000043189 5072 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
SftpdP50404 Srsf1-205ENSMUST00000139129 5362 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
SftpdP50404 Esrrb-202ENSMUST00000110203 2363 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
SftpdP50404 Col25a1-201ENSMUST00000080335 2624 ntAPPRIS P4 TSL 5 BASIC14.33□□□□□ -0.11
SftpdP50404 BC051537-201ENSMUST00000183290 1668 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
SftpdP50404 Hoxc10-201ENSMUST00000001699 1909 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
SftpdP50404 Vldlr-207ENSMUST00000167487 7971 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.11
SftpdP50404 Tmem30a-201ENSMUST00000034878 3658 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
SftpdP50404 Paqr8-202ENSMUST00000167119 1472 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
SftpdP50404 Il12rb1-205ENSMUST00000212657 2741 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
SftpdP50404 Adam15-201ENSMUST00000029676 2975 ntAPPRIS P4 TSL 1 (best) BASIC14.33□□□□□ -0.12
SftpdP50404 Gad2-201ENSMUST00000028123 5744 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
SftpdP50404 Clcnka-202ENSMUST00000105790 2511 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
SftpdP50404 1700001C02Rik-203ENSMUST00000127815 660 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
SftpdP50404 Gldnos-201ENSMUST00000149237 841 ntTSL 2 BASIC14.33□□□□□ -0.12
SftpdP50404 Pfdn5-205ENSMUST00000166658 1062 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
SftpdP50404 Calhm3-201ENSMUST00000178630 1044 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
SftpdP50404 1700022A21Rik-201ENSMUST00000182745 1051 ntBASIC14.33□□□□□ -0.12
SftpdP50404 1700025N23Rik-201ENSMUST00000186189 915 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
SftpdP50404 Gm36979-201ENSMUST00000193616 539 ntTSL 5 BASIC14.33□□□□□ -0.12
SftpdP50404 Gm19078-201ENSMUST00000206311 727 ntBASIC14.33□□□□□ -0.12
SftpdP50404 0610005C13Rik-202ENSMUST00000209510 671 ntTSL 3 BASIC14.33□□□□□ -0.12
SftpdP50404 Bpnt1-205ENSMUST00000210277 1226 ntTSL 5 BASIC14.33□□□□□ -0.12
SftpdP50404 Gm19220-201ENSMUST00000222682 803 ntBASIC14.33□□□□□ -0.12
SftpdP50404 Cd302-201ENSMUST00000028356 1257 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
SftpdP50404 Olfr750-201ENSMUST00000048478 1132 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
SftpdP50404 Erp29-201ENSMUST00000052590 1123 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
SftpdP50404 Stxbp1-202ENSMUST00000077458 3616 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
SftpdP50404 Gm13387-202ENSMUST00000131147 2646 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
SftpdP50404 Cln3-203ENSMUST00000098036 1571 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
SftpdP50404 Hdac7-202ENSMUST00000088402 4223 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
SftpdP50404 Kdm2b-204ENSMUST00000118027 5062 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
SftpdP50404 Tfap2a-201ENSMUST00000021787 3487 ntAPPRIS ALT1 TSL 1 (best) BASIC14.33□□□□□ -0.12
SftpdP50404 Naaa-202ENSMUST00000159345 1629 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
SftpdP50404 Serpinh1-205ENSMUST00000208119 2173 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
SftpdP50404 Gpr160-203ENSMUST00000108259 1916 ntAPPRIS P1 TSL 3 BASIC14.33□□□□□ -0.12
SftpdP50404 Nfasc-208ENSMUST00000188307 3049 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
SftpdP50404 Ell3-202ENSMUST00000116432 1674 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
SftpdP50404 Sema4b-201ENSMUST00000032754 3949 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
SftpdP50404 Cnmd-201ENSMUST00000022603 1433 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
SftpdP50404 Wisp3-201ENSMUST00000076713 1419 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
SftpdP50404 Pde4dip-205ENSMUST00000168438 8264 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
SftpdP50404 Rnf224-202ENSMUST00000205192 1707 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
SftpdP50404 Mfrp-205ENSMUST00000206308 4037 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
SftpdP50404 Nop58-201ENSMUST00000027174 1713 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
SftpdP50404 Cplx4-201ENSMUST00000025397 1751 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
SftpdP50404 Mark2-201ENSMUST00000025921 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
SftpdP50404 Nptn-206ENSMUST00000176557 1898 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
SftpdP50404 Cacna2d2-208ENSMUST00000170737 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
SftpdP50404 Zfp319-201ENSMUST00000057717 7232 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
SftpdP50404 Ttll9-202ENSMUST00000103155 1552 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
SftpdP50404 AC139350.1-201ENSMUST00000227064 1594 ntBASIC14.32□□□□□ -0.12
SftpdP50404 Lcn5-202ENSMUST00000100312 660 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
SftpdP50404 Ctnnbip1-202ENSMUST00000105692 634 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
SftpdP50404 Ghr-203ENSMUST00000110698 1171 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
SftpdP50404 Gm11524-201ENSMUST00000119349 807 ntBASIC14.32□□□□□ -0.12
SftpdP50404 Spcs2-ps-201ENSMUST00000122326 682 ntBASIC14.32□□□□□ -0.12
SftpdP50404 Gm11724-201ENSMUST00000125577 472 ntTSL 2 BASIC14.32□□□□□ -0.12
SftpdP50404 Gm15491-201ENSMUST00000133963 751 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
SftpdP50404 Lce1j-202ENSMUST00000186525 703 ntAPPRIS P1 TSL 3 BASIC14.32□□□□□ -0.12
SftpdP50404 Mpv17-209ENSMUST00000202241 903 ntAPPRIS ALT1 TSL 3 BASIC14.32□□□□□ -0.12
SftpdP50404 AC155258.1-201ENSMUST00000219303 253 ntBASIC14.32□□□□□ -0.12
SftpdP50404 CT025535.1-201ENSMUST00000227172 491 ntBASIC14.32□□□□□ -0.12
SftpdP50404 Taldo1-201ENSMUST00000026576 1229 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
SftpdP50404 Pts-201ENSMUST00000034570 1046 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
SftpdP50404 Smim11-201ENSMUST00000063641 517 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 43.5 ms