Protein–RNA interactions for Protein: P39749

Fen1, Flap endonuclease 1, mousemouse

Predictions only

Length 378 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fen1P39749 Zfyve28-201ENSMUST00000094868 3983 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Fen1P39749 Has3-203ENSMUST00000176144 4150 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Fen1P39749 Clcn3-201ENSMUST00000004430 4175 ntAPPRIS ALT1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Fen1P39749 Stpg2-202ENSMUST00000106239 2055 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
Fen1P39749 Fn1-213ENSMUST00000188674 7680 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Fen1P39749 Fn1-217ENSMUST00000190780 7694 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Fen1P39749 Cfp-201ENSMUST00000001156 1636 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Fen1P39749 Mapt-204ENSMUST00000106992 5253 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.22
Fen1P39749 Paf1-201ENSMUST00000003529 2003 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Fen1P39749 Coq6-203ENSMUST00000110278 1354 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.22
Fen1P39749 Rnf4-204ENSMUST00000182047 2944 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Fen1P39749 Fchsd1-201ENSMUST00000043437 4270 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Fen1P39749 Atp9a-204ENSMUST00000109177 3456 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Fen1P39749 Mef2b-204ENSMUST00000110146 1342 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
Fen1P39749 Rnf44-218ENSMUST00000177950 3941 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Fen1P39749 Tspan9-202ENSMUST00000112171 2584 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Fen1P39749 Gpc2-205ENSMUST00000161827 2586 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Fen1P39749 Tmsb4x-202ENSMUST00000112175 864 ntTSL 2 BASIC13.7□□□□□ -0.22
Fen1P39749 Gm15957-201ENSMUST00000118893 974 ntBASIC13.7□□□□□ -0.22
Fen1P39749 Rasd2-201ENSMUST00000132133 1299 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Fen1P39749 2810408I11Rik-202ENSMUST00000150749 711 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Fen1P39749 Gm2445-201ENSMUST00000182798 989 ntBASIC13.7□□□□□ -0.22
Fen1P39749 Nabp1-202ENSMUST00000185534 708 ntTSL 2 BASIC13.7□□□□□ -0.22
Fen1P39749 AC151286.1-201ENSMUST00000198489 145 ntBASIC13.7□□□□□ -0.22
Fen1P39749 Tspyl-ps-201ENSMUST00000220692 1117 ntBASIC13.7□□□□□ -0.22
Fen1P39749 Msrb2-201ENSMUST00000023856 1196 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Fen1P39749 Rpusd2-201ENSMUST00000028796 2706 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Fen1P39749 Oasl1-202ENSMUST00000112143 2181 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Fen1P39749 Tmem181b-ps-203ENSMUST00000188746 1626 ntTSL 5 BASIC13.7□□□□□ -0.22
Fen1P39749 Mtus2-203ENSMUST00000085558 7543 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Fen1P39749 Traf1-202ENSMUST00000113064 2325 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Fen1P39749 Kcnk2-202ENSMUST00000110920 3572 ntAPPRIS ALT1 TSL 5 BASIC13.7□□□□□ -0.22
Fen1P39749 Mks1-201ENSMUST00000038196 2499 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Fen1P39749 Nfic-202ENSMUST00000078185 3163 ntTSL 5 BASIC13.7□□□□□ -0.22
Fen1P39749 Sorl1-201ENSMUST00000060989 10715 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Fen1P39749 Tppp3-203ENSMUST00000177126 1396 ntAPPRIS P1 TSL 3 BASIC13.7□□□□□ -0.22
Fen1P39749 Fam171a1-201ENSMUST00000062934 4129 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Fen1P39749 Zdhhc25-201ENSMUST00000066949 1368 ntAPPRIS P1 BASIC13.7□□□□□ -0.22
Fen1P39749 Ugt1a8-201ENSMUST00000113139 2227 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
Fen1P39749 Wdfy2-201ENSMUST00000014691 6646 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Fen1P39749 Rab11fip1-201ENSMUST00000033878 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Fen1P39749 Slc35e2-202ENSMUST00000105608 6291 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
Fen1P39749 Dennd4b-201ENSMUST00000098914 5423 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Fen1P39749 Zfp296-201ENSMUST00000108453 1530 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Fen1P39749 Rapgef2-201ENSMUST00000118100 6573 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Fen1P39749 Ilvbl-208ENSMUST00000218875 3020 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Fen1P39749 Gm9754-201ENSMUST00000031305 3004 ntTSL 2 BASIC13.69□□□□□ -0.22
Fen1P39749 Gm3002-201ENSMUST00000170480 1955 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
Fen1P39749 Gm3005-202ENSMUST00000178728 1955 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
Fen1P39749 Fuz-213ENSMUST00000209039 1453 ntTSL 5 BASIC13.69□□□□□ -0.22
Fen1P39749 4931440F15Rik-201ENSMUST00000104962 3274 ntAPPRIS P1 BASIC13.69□□□□□ -0.22
Fen1P39749 Chrnb2-201ENSMUST00000029562 6399 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Fen1P39749 Bscl2-206ENSMUST00000160556 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Fen1P39749 Slc7a15-201ENSMUST00000036938 1907 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Fen1P39749 5330406M23Rik-201ENSMUST00000195672 2094 ntBASIC13.69□□□□□ -0.22
Fen1P39749 Etfrf1-204ENSMUST00000111723 842 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
Fen1P39749 Gm15427-201ENSMUST00000117288 531 ntBASIC13.69□□□□□ -0.22
Fen1P39749 Ercc8-202ENSMUST00000120672 1144 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Fen1P39749 Rpl18-ps1-201ENSMUST00000121555 525 ntBASIC13.69□□□□□ -0.22
Fen1P39749 Gm20481-201ENSMUST00000173680 564 ntAPPRIS P1 TSL 3 BASIC13.69□□□□□ -0.22
Fen1P39749 Lmo4-207ENSMUST00000196264 1263 ntTSL 5 BASIC13.69□□□□□ -0.22
Fen1P39749 Orc6-201ENSMUST00000034132 1287 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Fen1P39749 Olfr324-201ENSMUST00000054683 1122 ntAPPRIS P2 BASIC13.69□□□□□ -0.22
Fen1P39749 Atad3aos-201ENSMUST00000067628 971 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Fen1P39749 Olfr541-201ENSMUST00000080681 1103 ntAPPRIS P1 BASIC13.69□□□□□ -0.22
Fen1P39749 Ptpn9-201ENSMUST00000034832 4101 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Fen1P39749 Rtn3-203ENSMUST00000088169 1709 ntTSL 5 BASIC13.69□□□□□ -0.22
Fen1P39749 Mocs2-208ENSMUST00000166176 1855 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Fen1P39749 Spidr-201ENSMUST00000040248 3279 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Fen1P39749 Crat-202ENSMUST00000102854 2160 ntTSL 5 BASIC13.69□□□□□ -0.22
Fen1P39749 Gm26819-201ENSMUST00000180656 5128 ntTSL 5 BASIC13.69□□□□□ -0.22
Fen1P39749 Alx1-201ENSMUST00000040859 2493 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Fen1P39749 Sp3-202ENSMUST00000102689 4181 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Fen1P39749 Sirpa-214ENSMUST00000179001 3812 ntAPPRIS P3 TSL 5 BASIC13.69□□□□□ -0.22
Fen1P39749 Bcat2-202ENSMUST00000120864 1536 ntTSL 5 BASIC13.69□□□□□ -0.22
Fen1P39749 Klc2-204ENSMUST00000116563 3169 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Fen1P39749 Urgcp-203ENSMUST00000118076 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Fen1P39749 Taok2-202ENSMUST00000117394 4985 ntAPPRIS P4 TSL 1 (best) BASIC13.69□□□□□ -0.22
Fen1P39749 Tln1-201ENSMUST00000030187 8393 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Fen1P39749 Il13ra1-201ENSMUST00000033418 3712 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Fen1P39749 Mest-202ENSMUST00000124665 2665 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Fen1P39749 Scin-202ENSMUST00000078481 2654 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Fen1P39749 Mpp4-210ENSMUST00000191200 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Fen1P39749 Dysf-210ENSMUST00000153860 6525 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
Fen1P39749 Sema6d-206ENSMUST00000103239 6225 ntAPPRIS P4 TSL 5 BASIC13.68□□□□□ -0.22
Fen1P39749 Agpat4-201ENSMUST00000024594 1915 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Fen1P39749 Entpd2-201ENSMUST00000028328 1935 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Fen1P39749 Hnrnpa1-201ENSMUST00000036004 1918 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Fen1P39749 Camk2b-203ENSMUST00000066431 1603 ntAPPRIS ALT1 TSL 5 BASIC13.68□□□□□ -0.22
Fen1P39749 Abat-202ENSMUST00000115838 1348 ntTSL 2 BASIC13.68□□□□□ -0.22
Fen1P39749 1700029J07Rik-202ENSMUST00000098786 1340 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Fen1P39749 Slc6a4-202ENSMUST00000108402 2796 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
Fen1P39749 Hacd2-201ENSMUST00000061156 3603 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Fen1P39749 Rinl-201ENSMUST00000059857 2871 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Fen1P39749 Zfp57-201ENSMUST00000069250 1749 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
Fen1P39749 Dcp1b-201ENSMUST00000073909 1748 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Fen1P39749 Nbeal2-211ENSMUST00000196488 8599 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
Fen1P39749 Dio1-202ENSMUST00000106748 396 ntTSL 5 BASIC13.68□□□□□ -0.22
Fen1P39749 Tmem262-201ENSMUST00000143303 545 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Fen1P39749 Gm25911-201ENSMUST00000157621 56 ntBASIC13.68□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 47.4 ms