Protein–RNA interactions for Protein: P39061

Col18a1, Collagen alpha-1(XVIII) chain, mousemouse

Predictions only

Length 1,774 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col18a1P39061 Plekhd1os-201ENSMUST00000153297 944 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Col18a1P39061 Nme9-202ENSMUST00000163199 1196 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
Col18a1P39061 Gm18893-201ENSMUST00000198416 943 ntBASIC17.61■□□□□ 0.41
Col18a1P39061 Gm19287-201ENSMUST00000203190 358 ntBASIC17.61■□□□□ 0.41
Col18a1P39061 Calca-205ENSMUST00000205933 458 ntTSL 3 BASIC17.61■□□□□ 0.41
Col18a1P39061 Gm4607-201ENSMUST00000206649 577 ntBASIC17.61■□□□□ 0.41
Col18a1P39061 Olfr707-202ENSMUST00000208759 1242 ntAPPRIS P1 TSL 3 BASIC17.61■□□□□ 0.41
Col18a1P39061 Aprt-ps-201ENSMUST00000212311 505 ntBASIC17.61■□□□□ 0.41
Col18a1P39061 Gm40652-201ENSMUST00000218944 895 ntTSL 5 BASIC17.61■□□□□ 0.41
Col18a1P39061 AC166344.1-202ENSMUST00000224139 234 ntBASIC17.61■□□□□ 0.41
Col18a1P39061 Cox6a2-201ENSMUST00000033049 680 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Col18a1P39061 Gm13812-201ENSMUST00000118061 1347 ntBASIC17.61■□□□□ 0.41
Col18a1P39061 Gm13810-201ENSMUST00000118584 1347 ntBASIC17.61■□□□□ 0.41
Col18a1P39061 Gm16796-201ENSMUST00000126086 3172 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Col18a1P39061 Zyx-201ENSMUST00000070635 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Col18a1P39061 Fzd10-201ENSMUST00000117102 3250 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
Col18a1P39061 Cd79b-201ENSMUST00000044228 1431 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Col18a1P39061 Shbg-201ENSMUST00000005334 1419 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Col18a1P39061 Smyd5-201ENSMUST00000045693 2486 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Col18a1P39061 Hs3st5-201ENSMUST00000058738 3078 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Col18a1P39061 Brpf1-204ENSMUST00000113122 4773 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
Col18a1P39061 Phlpp1-201ENSMUST00000061047 6226 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Col18a1P39061 Hoxd3os1-202ENSMUST00000139005 1701 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Col18a1P39061 Plcxd3-201ENSMUST00000061925 1851 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Col18a1P39061 Gm16397-201ENSMUST00000122201 494 ntBASIC17.6■□□□□ 0.41
Col18a1P39061 9430091E24Rik-201ENSMUST00000127301 1067 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Col18a1P39061 4930448A20Rik-201ENSMUST00000205988 1034 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Col18a1P39061 Gm19994-201ENSMUST00000217086 586 ntBASIC17.6■□□□□ 0.41
Col18a1P39061 Pebp4-201ENSMUST00000022678 1079 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Col18a1P39061 Sat1-201ENSMUST00000026318 1162 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Col18a1P39061 Cmtm2a-201ENSMUST00000034344 1081 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Col18a1P39061 Azgp1-201ENSMUST00000035390 1297 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Col18a1P39061 Nceh1-202ENSMUST00000091284 830 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Col18a1P39061 Cachd1-201ENSMUST00000030257 5765 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Col18a1P39061 Gm43273-201ENSMUST00000199649 2594 ntBASIC17.6■□□□□ 0.41
Col18a1P39061 Slc25a25-204ENSMUST00000113308 2643 ntTSL 5 BASIC17.6■□□□□ 0.41
Col18a1P39061 Kdm3b-201ENSMUST00000043775 6363 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Col18a1P39061 Mettl1-201ENSMUST00000006915 1791 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Col18a1P39061 Egln3-201ENSMUST00000039516 2662 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Col18a1P39061 Ripk3-201ENSMUST00000022830 1892 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Col18a1P39061 Lims2-201ENSMUST00000025254 1870 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Col18a1P39061 Spcs2-201ENSMUST00000036274 2909 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Col18a1P39061 Wipi1-201ENSMUST00000047186 3338 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Col18a1P39061 4930595D18Rik-201ENSMUST00000121608 818 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Col18a1P39061 H2-Q3-201ENSMUST00000172583 608 ntBASIC17.59■□□□□ 0.41
Col18a1P39061 Rpl41-206ENSMUST00000177163 544 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Col18a1P39061 Gm45550-201ENSMUST00000209380 946 ntBASIC17.59■□□□□ 0.41
Col18a1P39061 Gm21027-201ENSMUST00000219300 1236 ntBASIC17.59■□□□□ 0.41
Col18a1P39061 AC163667.3-201ENSMUST00000225774 222 ntBASIC17.59■□□□□ 0.41
Col18a1P39061 1700128F08Rik-201ENSMUST00000034483 1110 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Col18a1P39061 Il25-201ENSMUST00000037863 1064 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Col18a1P39061 Nupl2-201ENSMUST00000049887 2914 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Col18a1P39061 1810032O08Rik-201ENSMUST00000106378 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Col18a1P39061 Pla2g2f-201ENSMUST00000030526 2465 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Col18a1P39061 Eps8l1-201ENSMUST00000086372 2522 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Col18a1P39061 Sh3bp5-201ENSMUST00000091903 2684 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
Col18a1P39061 Nepro-201ENSMUST00000048788 2866 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Col18a1P39061 Mir680-2-201ENSMUST00000102163 110 ntBASIC17.58■□□□□ 0.41
Col18a1P39061 Gm23251-201ENSMUST00000103773 110 ntBASIC17.58■□□□□ 0.41
Col18a1P39061 Nop56-204ENSMUST00000136621 868 ntTSL 5 BASIC17.58■□□□□ 0.41
Col18a1P39061 Plch2-208ENSMUST00000145662 1818 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
Col18a1P39061 U2af1l4-206ENSMUST00000163654 781 ntTSL 2 BASIC17.58■□□□□ 0.41
Col18a1P39061 U2af1l4-221ENSMUST00000167361 860 ntTSL 2 BASIC17.58■□□□□ 0.41
Col18a1P39061 Gm5732-201ENSMUST00000182596 1007 ntBASIC17.58■□□□□ 0.41
Col18a1P39061 Gm29615-201ENSMUST00000185371 697 ntBASIC17.58■□□□□ 0.41
Col18a1P39061 Gm28224-201ENSMUST00000186078 697 ntBASIC17.58■□□□□ 0.41
Col18a1P39061 Gm28215-201ENSMUST00000186146 346 ntTSL 5 BASIC17.58■□□□□ 0.41
Col18a1P39061 Gm29001-201ENSMUST00000186177 697 ntBASIC17.58■□□□□ 0.41
Col18a1P39061 Gm28292-201ENSMUST00000186593 697 ntBASIC17.58■□□□□ 0.41
Col18a1P39061 Gm28101-201ENSMUST00000187608 697 ntBASIC17.58■□□□□ 0.41
Col18a1P39061 Gm29076-201ENSMUST00000187689 697 ntBASIC17.58■□□□□ 0.41
Col18a1P39061 Gm28302-201ENSMUST00000187931 697 ntBASIC17.58■□□□□ 0.41
Col18a1P39061 Gm28646-201ENSMUST00000188220 697 ntBASIC17.58■□□□□ 0.41
Col18a1P39061 Gm28205-201ENSMUST00000189177 697 ntBASIC17.58■□□□□ 0.41
Col18a1P39061 Gm29032-201ENSMUST00000189797 697 ntBASIC17.58■□□□□ 0.41
Col18a1P39061 Gm28695-201ENSMUST00000190300 697 ntBASIC17.58■□□□□ 0.41
Col18a1P39061 Gm37448-201ENSMUST00000192795 697 ntBASIC17.58■□□□□ 0.41
Col18a1P39061 AY036118-201ENSMUST00000200021 923 ntBASIC17.58■□□□□ 0.41
Col18a1P39061 Kctd14-204ENSMUST00000205577 2310 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.41
Col18a1P39061 Triml2-203ENSMUST00000209872 1395 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
Col18a1P39061 Tle4-201ENSMUST00000052011 4555 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.41
Col18a1P39061 Unc5b-201ENSMUST00000077925 5869 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Col18a1P39061 Rsg1-201ENSMUST00000097813 985 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.41
Col18a1P39061 Fmnl2-201ENSMUST00000049483 5461 ntTSL 5 BASIC17.58■□□□□ 0.41
Col18a1P39061 Brpf1-203ENSMUST00000113121 4603 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.41
Col18a1P39061 Supt5-208ENSMUST00000209141 3755 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Col18a1P39061 Espn-212ENSMUST00000105658 2815 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.4
Col18a1P39061 Krt2-201ENSMUST00000023712 2613 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Col18a1P39061 Zfp804a-201ENSMUST00000047527 4620 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Col18a1P39061 Ttl-201ENSMUST00000035812 4567 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Col18a1P39061 Rab10-201ENSMUST00000021001 3513 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Col18a1P39061 Foxp4-201ENSMUST00000097311 3197 ntAPPRIS P4 TSL 1 (best) BASIC17.58■□□□□ 0.4
Col18a1P39061 Acoxl-202ENSMUST00000110344 1573 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Col18a1P39061 Gm42918-201ENSMUST00000199249 1580 ntBASIC17.58■□□□□ 0.4
Col18a1P39061 Ppp4r3a-201ENSMUST00000048305 4516 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Col18a1P39061 Enah-205ENSMUST00000177811 4231 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.4
Col18a1P39061 Phyhd1-202ENSMUST00000091132 1353 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Col18a1P39061 1110008P14Rik-202ENSMUST00000146423 2618 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Col18a1P39061 Lsm14b-202ENSMUST00000058764 2566 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Col18a1P39061 S100a16-206ENSMUST00000107335 926 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 62.3 ms