Protein–RNA interactions for Protein: P35601

Rfc1, Replication factor C subunit 1, mousemouse

Predictions only

Length 1,131 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfc1P35601 Prodh-205ENSMUST00000136776 2041 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
Rfc1P35601 Smarca4-204ENSMUST00000174008 5405 ntAPPRIS ALT1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Rfc1P35601 Nrf1-211ENSMUST00000115212 3584 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Rfc1P35601 Rrnad1-201ENSMUST00000005016 2492 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Rfc1P35601 Pimreg-201ENSMUST00000021164 1513 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Rfc1P35601 Klk2-ps-202ENSMUST00000206865 2684 ntTSL 5 BASIC14.35□□□□□ -0.11
Rfc1P35601 Plekhb1-206ENSMUST00000107047 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Rfc1P35601 Fam234b-202ENSMUST00000111916 2927 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Rfc1P35601 Ocln-203ENSMUST00000159459 1950 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Rfc1P35601 C2cd4c-201ENSMUST00000059699 6729 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Rfc1P35601 Tjap1-203ENSMUST00000180283 2368 ntAPPRIS P2 TSL 5 BASIC14.34□□□□□ -0.11
Rfc1P35601 Gm2670-201ENSMUST00000180668 2804 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Rfc1P35601 Tpi1-205ENSMUST00000172132 1607 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Rfc1P35601 E2f7-209ENSMUST00000174857 2865 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Rfc1P35601 Irak1-203ENSMUST00000101458 2052 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
Rfc1P35601 Slc35e2-202ENSMUST00000105608 6291 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Rfc1P35601 Capns2-201ENSMUST00000104947 1005 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
Rfc1P35601 Bad-203ENSMUST00000113426 740 ntTSL 5 BASIC14.34□□□□□ -0.11
Rfc1P35601 Hoxa13-202ENSMUST00000114416 769 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Rfc1P35601 Gm9385-201ENSMUST00000117563 472 ntBASIC14.34□□□□□ -0.11
Rfc1P35601 Lhx1os-201ENSMUST00000126072 589 ntTSL 3 BASIC14.34□□□□□ -0.11
Rfc1P35601 4930412M03Rik-201ENSMUST00000130746 1111 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Rfc1P35601 Gm5479-201ENSMUST00000160578 435 ntBASIC14.34□□□□□ -0.11
Rfc1P35601 Cmtm3-204ENSMUST00000212081 850 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Rfc1P35601 Olfr742-202ENSMUST00000213935 2117 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Rfc1P35601 Miox-201ENSMUST00000023282 1130 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Rfc1P35601 Ly6g6f-201ENSMUST00000038507 1141 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Rfc1P35601 Aacs-201ENSMUST00000031445 3239 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Rfc1P35601 Cgnl1-202ENSMUST00000121322 6541 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
Rfc1P35601 Smug1-201ENSMUST00000064067 3281 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
Rfc1P35601 Gm13722-201ENSMUST00000117964 3066 ntBASIC14.34□□□□□ -0.11
Rfc1P35601 Bcl2l2-201ENSMUST00000022806 3509 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Rfc1P35601 Galnt6-201ENSMUST00000052069 3798 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Rfc1P35601 D6Ertd527e-203ENSMUST00000203747 2216 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
Rfc1P35601 Cacna1g-208ENSMUST00000107790 8035 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Rfc1P35601 Parp3-202ENSMUST00000112479 2030 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Rfc1P35601 Mks1-201ENSMUST00000038196 2499 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Rfc1P35601 Espn-201ENSMUST00000030785 3406 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Rfc1P35601 Tmem30c-202ENSMUST00000119407 1396 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Rfc1P35601 Rnf17-202ENSMUST00000223627 2077 ntBASIC14.34□□□□□ -0.11
Rfc1P35601 2810006K23Rik-202ENSMUST00000111477 1637 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
Rfc1P35601 Pdlim3-201ENSMUST00000034053 1604 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.11
Rfc1P35601 Sun2-202ENSMUST00000089311 3709 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.11
Rfc1P35601 Irf3-202ENSMUST00000107834 1429 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Rfc1P35601 Rps6kb2-202ENSMUST00000118483 1409 ntTSL 5 BASIC14.33□□□□□ -0.11
Rfc1P35601 Luc7l-203ENSMUST00000119928 1441 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.11
Rfc1P35601 Dtnb-201ENSMUST00000077930 2376 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.11
Rfc1P35601 Gm4780-202ENSMUST00000215200 2644 ntBASIC14.33□□□□□ -0.11
Rfc1P35601 Nob1-201ENSMUST00000003946 1658 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Rfc1P35601 Eef1akmt3-201ENSMUST00000116231 2719 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
Rfc1P35601 Matn2-203ENSMUST00000226766 3252 ntBASIC14.33□□□□□ -0.12
Rfc1P35601 Mlxip-201ENSMUST00000068237 7303 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Rfc1P35601 Twistnb-201ENSMUST00000020877 4325 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Rfc1P35601 Rps27l-203ENSMUST00000127896 575 ntTSL 5 BASIC14.33□□□□□ -0.12
Rfc1P35601 2200002J24Rik-201ENSMUST00000013227 333 ntAPPRIS P1 TSL 3 BASIC14.33□□□□□ -0.12
Rfc1P35601 Gm16156-201ENSMUST00000141168 713 ntTSL 3 BASIC14.33□□□□□ -0.12
Rfc1P35601 Irs3-202ENSMUST00000196511 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Rfc1P35601 Haus7-202ENSMUST00000077243 1032 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Rfc1P35601 Lrif1-202ENSMUST00000098751 929 ntTSL 2 BASIC14.33□□□□□ -0.12
Rfc1P35601 Ampd2-202ENSMUST00000102637 3586 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
Rfc1P35601 Togaram2-205ENSMUST00000153445 3302 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
Rfc1P35601 Pold3-201ENSMUST00000032969 3069 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Rfc1P35601 Alpi-201ENSMUST00000113270 2337 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Rfc1P35601 Rp2-201ENSMUST00000033372 4417 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Rfc1P35601 Kifc1-204ENSMUST00000173492 2350 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Rfc1P35601 G3bp2-209ENSMUST00000202258 1884 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
Rfc1P35601 C1qtnf6-201ENSMUST00000023075 2402 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Rfc1P35601 Pdzd11-201ENSMUST00000015812 1626 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Rfc1P35601 Pdgfra-205ENSMUST00000201711 4088 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Rfc1P35601 Acsf3-203ENSMUST00000212790 2171 ntAPPRIS P2 TSL 5 BASIC14.33□□□□□ -0.12
Rfc1P35601 Xrcc1-201ENSMUST00000063249 2155 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Rfc1P35601 Ltbp2-203ENSMUST00000163189 6470 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Rfc1P35601 Bcl11a-202ENSMUST00000109514 5989 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Rfc1P35601 Gm13410-201ENSMUST00000117058 1415 ntBASIC14.32□□□□□ -0.12
Rfc1P35601 Rbm10-202ENSMUST00000082089 2562 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
Rfc1P35601 Shroom1-202ENSMUST00000093114 2886 ntTSL 2 BASIC14.32□□□□□ -0.12
Rfc1P35601 Zfp207-206ENSMUST00000165565 2311 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Rfc1P35601 Gm26651-201ENSMUST00000181851 2325 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Rfc1P35601 Olfr279-202ENSMUST00000205772 5330 ntAPPRIS P1 TSL 3 BASIC14.32□□□□□ -0.12
Rfc1P35601 Egfem1-202ENSMUST00000119598 2687 ntAPPRIS P4 TSL 1 (best) BASIC14.32□□□□□ -0.12
Rfc1P35601 Gm28539-201ENSMUST00000190050 2982 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
Rfc1P35601 Ctps2-206ENSMUST00000112303 3289 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Rfc1P35601 Scube1-203ENSMUST00000076060 3913 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Rfc1P35601 Gjb1-202ENSMUST00000119080 1513 ntAPPRIS P1 TSL 3 BASIC14.32□□□□□ -0.12
Rfc1P35601 Selenot-201ENSMUST00000107924 3157 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Rfc1P35601 Fau-202ENSMUST00000178310 571 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Rfc1P35601 A830052D11Rik-201ENSMUST00000181729 1130 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Rfc1P35601 Idh2-207ENSMUST00000206714 392 ntTSL 3 BASIC14.32□□□□□ -0.12
Rfc1P35601 Gm31727-201ENSMUST00000210102 360 ntTSL 3 BASIC14.32□□□□□ -0.12
Rfc1P35601 Hsd17b14-205ENSMUST00000210300 797 ntTSL 5 BASIC14.32□□□□□ -0.12
Rfc1P35601 Frmd5-213ENSMUST00000212518 922 ntTSL 5 BASIC14.32□□□□□ -0.12
Rfc1P35601 AC174742.1-201ENSMUST00000218272 304 ntBASIC14.32□□□□□ -0.12
Rfc1P35601 Nxnl2-201ENSMUST00000021828 1167 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Rfc1P35601 2010107E04Rik-203ENSMUST00000222874 612 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
Rfc1P35601 Calcb-201ENSMUST00000032902 962 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Rfc1P35601 Pfn3-201ENSMUST00000054146 545 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
Rfc1P35601 Hcrt-201ENSMUST00000055083 586 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Rfc1P35601 Gapdh-201ENSMUST00000073605 1272 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Rfc1P35601 Gm5145-201ENSMUST00000095633 837 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
Rfc1P35601 Dnajc6-204ENSMUST00000106930 5127 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 51.7 ms