Protein–RNA interactions for Protein: P33435

Mmp13, Collagenase 3, mousemouse

Predictions only

Length 472 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mmp13P33435 Spin1-201ENSMUST00000095797 4434 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Mmp13P33435 Mei4-202ENSMUST00000189391 1817 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Mmp13P33435 Pde10a-202ENSMUST00000089085 7717 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
Mmp13P33435 Gpsm2-201ENSMUST00000029482 3498 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Mmp13P33435 Kcnq2-208ENSMUST00000103051 4200 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.17
Mmp13P33435 Ankrd42-202ENSMUST00000118157 2782 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Mmp13P33435 Nfic-202ENSMUST00000078185 3163 ntTSL 5 BASIC13.96□□□□□ -0.17
Mmp13P33435 Atat1-203ENSMUST00000077494 1340 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Mmp13P33435 Zfpm2-201ENSMUST00000053467 4974 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Mmp13P33435 Ppt2-201ENSMUST00000064953 1729 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Mmp13P33435 1810058I24Rik-203ENSMUST00000152147 2521 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Mmp13P33435 Chfr-201ENSMUST00000014812 3146 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
Mmp13P33435 Gk5-202ENSMUST00000122383 4455 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Mmp13P33435 Engase-202ENSMUST00000135383 4064 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Mmp13P33435 Dclk1-211ENSMUST00000199169 1499 ntTSL 2 BASIC13.96□□□□□ -0.17
Mmp13P33435 Cldn14-201ENSMUST00000050962 1457 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Mmp13P33435 Ppdpf-202ENSMUST00000108841 689 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Mmp13P33435 Gm12151-201ENSMUST00000121374 290 ntBASIC13.96□□□□□ -0.17
Mmp13P33435 Gm14104-201ENSMUST00000135990 356 ntTSL 5 BASIC13.96□□□□□ -0.17
Mmp13P33435 2210408F21Rik-214ENSMUST00000155345 1022 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Mmp13P33435 Tm7sf2-209ENSMUST00000161528 732 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Mmp13P33435 Gm26839-201ENSMUST00000180686 842 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Mmp13P33435 Gm3809-201ENSMUST00000180973 1006 ntBASIC13.96□□□□□ -0.17
Mmp13P33435 2010015M23Rik-201ENSMUST00000181900 1199 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Mmp13P33435 Gpx4-207ENSMUST00000183037 735 ntTSL 2 BASIC13.96□□□□□ -0.17
Mmp13P33435 1700080E11Rik-202ENSMUST00000190661 682 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Mmp13P33435 Shd-206ENSMUST00000225145 998 ntBASIC13.96□□□□□ -0.17
Mmp13P33435 Ndufc2-201ENSMUST00000032882 683 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Mmp13P33435 Bccip-201ENSMUST00000033282 1244 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Mmp13P33435 Myl3-201ENSMUST00000079784 937 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Mmp13P33435 Casc4-202ENSMUST00000089912 3602 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Mmp13P33435 Ube3b-201ENSMUST00000074002 5194 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Mmp13P33435 Nfe2-205ENSMUST00000133600 1605 ntTSL 5 BASIC13.96□□□□□ -0.17
Mmp13P33435 Rnase10-201ENSMUST00000022424 1629 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
Mmp13P33435 AC124751.1-201ENSMUST00000222716 1408 ntBASIC13.96□□□□□ -0.18
Mmp13P33435 Prrx1-204ENSMUST00000174397 6527 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
Mmp13P33435 Tgm1-203ENSMUST00000178034 2730 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Mmp13P33435 Dtnb-223ENSMUST00000174547 2112 ntTSL 5 BASIC13.96□□□□□ -0.18
Mmp13P33435 Tcf4-258ENSMUST00000202937 2103 ntTSL 5 BASIC13.96□□□□□ -0.18
Mmp13P33435 4930556M19Rik-201ENSMUST00000180604 2468 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
Mmp13P33435 Gm8337-201ENSMUST00000187358 1938 ntBASIC13.96□□□□□ -0.18
Mmp13P33435 Mark2-201ENSMUST00000025921 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.18
Mmp13P33435 Atat1-201ENSMUST00000056034 1930 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.18
Mmp13P33435 H2-Q6-202ENSMUST00000174699 2085 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
Mmp13P33435 Malt1-202ENSMUST00000224056 4028 ntAPPRIS ALT2 BASIC13.95□□□□□ -0.18
Mmp13P33435 AC238940.1-201ENSMUST00000225106 1858 ntBASIC13.95□□□□□ -0.18
Mmp13P33435 Scyl3-201ENSMUST00000027876 4368 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
Mmp13P33435 Gpc2-205ENSMUST00000161827 2586 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Mmp13P33435 Trim34a-202ENSMUST00000106848 2043 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Mmp13P33435 Secisbp2l-201ENSMUST00000053699 6797 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Mmp13P33435 Zfp365-201ENSMUST00000064656 4259 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Mmp13P33435 Minos1-203ENSMUST00000143971 2549 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Mmp13P33435 Wnk1-203ENSMUST00000088644 11330 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
Mmp13P33435 Gm9754-201ENSMUST00000031305 3004 ntTSL 2 BASIC13.95□□□□□ -0.18
Mmp13P33435 Cpeb4-201ENSMUST00000020543 2312 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Mmp13P33435 1700060J05Rik-201ENSMUST00000138377 1060 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Mmp13P33435 Tgfb1i1-203ENSMUST00000163609 1053 ntTSL 5 BASIC13.95□□□□□ -0.18
Mmp13P33435 Mir8102-201ENSMUST00000184148 139 ntBASIC13.95□□□□□ -0.18
Mmp13P33435 Smim22-206ENSMUST00000184256 381 ntTSL 3 BASIC13.95□□□□□ -0.18
Mmp13P33435 Gm27989-201ENSMUST00000184721 107 ntBASIC13.95□□□□□ -0.18
Mmp13P33435 Sar1b-201ENSMUST00000020653 1201 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Mmp13P33435 Gm18027-201ENSMUST00000218947 619 ntBASIC13.95□□□□□ -0.18
Mmp13P33435 Cnpy2-201ENSMUST00000026446 763 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
Mmp13P33435 Oxt-201ENSMUST00000028764 537 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Mmp13P33435 Gstp2-201ENSMUST00000042700 770 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Mmp13P33435 Cfd-201ENSMUST00000061653 922 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Mmp13P33435 Cenpm-201ENSMUST00000089155 1109 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Mmp13P33435 Rpl10-ps2-201ENSMUST00000098432 645 ntBASIC13.95□□□□□ -0.18
Mmp13P33435 Ptgdr2-201ENSMUST00000037261 2644 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Mmp13P33435 Mlxip-201ENSMUST00000068237 7303 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Mmp13P33435 Ccdc8-201ENSMUST00000094805 4809 ntAPPRIS P1 BASIC13.95□□□□□ -0.18
Mmp13P33435 Mkrn1-201ENSMUST00000031985 3046 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
Mmp13P33435 Ppp4r3b-201ENSMUST00000020755 5125 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Mmp13P33435 Zdhhc23-201ENSMUST00000036321 1380 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Mmp13P33435 Grm6-201ENSMUST00000000631 4291 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
Mmp13P33435 Arnt-201ENSMUST00000015666 2603 ntTSL 5 BASIC13.94□□□□□ -0.18
Mmp13P33435 Phf21b-201ENSMUST00000016768 3377 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Mmp13P33435 Abat-203ENSMUST00000115839 2414 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Mmp13P33435 Pi4kb-201ENSMUST00000072287 3692 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Mmp13P33435 Adamts7-202ENSMUST00000113060 5098 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
Mmp13P33435 Mdm1-208ENSMUST00000219087 1318 ntTSL 2 BASIC13.94□□□□□ -0.18
Mmp13P33435 Acrbp-205ENSMUST00000112414 1498 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Mmp13P33435 Adcyap1r1-202ENSMUST00000070756 6107 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Mmp13P33435 Adamts7-208ENSMUST00000167122 5338 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
Mmp13P33435 Hnrnpf-210ENSMUST00000180341 1922 ntAPPRIS P1 BASIC13.94□□□□□ -0.18
Mmp13P33435 Calcr-203ENSMUST00000168592 2064 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
Mmp13P33435 Prrt3-203ENSMUST00000204268 3741 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Mmp13P33435 Asb10-202ENSMUST00000117900 1432 ntTSL 5 BASIC13.94□□□□□ -0.18
Mmp13P33435 Rpl17-ps10-201ENSMUST00000119383 555 ntBASIC13.94□□□□□ -0.18
Mmp13P33435 Rpl17-ps9-201ENSMUST00000119541 555 ntBASIC13.94□□□□□ -0.18
Mmp13P33435 Rpl17-ps4-201ENSMUST00000120241 555 ntBASIC13.94□□□□□ -0.18
Mmp13P33435 Gm37596-201ENSMUST00000193565 1021 ntAPPRIS P1 BASIC13.94□□□□□ -0.18
Mmp13P33435 Gm46209-201ENSMUST00000217912 553 ntBASIC13.94□□□□□ -0.18
Mmp13P33435 Gm6566-201ENSMUST00000221468 1171 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Mmp13P33435 Gm16476-201ENSMUST00000221544 139 ntBASIC13.94□□□□□ -0.18
Mmp13P33435 Cox10-201ENSMUST00000049091 2915 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Mmp13P33435 Olfr283-201ENSMUST00000057386 1102 ntAPPRIS P1 BASIC13.94□□□□□ -0.18
Mmp13P33435 Mir125a-201ENSMUST00000083545 68 ntBASIC13.94□□□□□ -0.18
Mmp13P33435 AC154725.1-201ENSMUST00000224826 1961 ntBASIC13.94□□□□□ -0.18
Mmp13P33435 2900026A02Rik-201ENSMUST00000050125 5876 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 34.7 ms