Protein–RNA interactions for Protein: P25318

Col8a2, Collagen alpha-2(VIII) chain, mousemouse

Predictions only

Length 699 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col8a2P25318 Grk6-205ENSMUST00000224653 2976 ntBASIC11.36□□□□□ -0.59
Col8a2P25318 Mbp-203ENSMUST00000075372 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Col8a2P25318 Slc35g3-201ENSMUST00000102586 1618 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Col8a2P25318 Gm26747-201ENSMUST00000180597 1716 ntTSL 5 BASIC11.36□□□□□ -0.59
Col8a2P25318 Snrnp27-202ENSMUST00000113683 1005 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Col8a2P25318 Gm12537-201ENSMUST00000119266 1002 ntBASIC11.36□□□□□ -0.59
Col8a2P25318 Gm12070-201ENSMUST00000119551 1002 ntBASIC11.36□□□□□ -0.59
Col8a2P25318 Gm12671-201ENSMUST00000119978 1002 ntBASIC11.36□□□□□ -0.59
Col8a2P25318 Gm13292-201ENSMUST00000120014 1000 ntBASIC11.36□□□□□ -0.59
Col8a2P25318 Rpl9-203ENSMUST00000120094 680 ntAPPRIS P1 TSL 2 BASIC11.36□□□□□ -0.59
Col8a2P25318 Gm12403-201ENSMUST00000121384 959 ntBASIC11.36□□□□□ -0.59
Col8a2P25318 Gm16342-201ENSMUST00000124025 1025 ntBASIC11.36□□□□□ -0.59
Col8a2P25318 Ccdc70-201ENSMUST00000017193 1054 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Col8a2P25318 Gm10359-201ENSMUST00000180167 1002 ntBASIC11.36□□□□□ -0.59
Col8a2P25318 Gm12033-201ENSMUST00000180654 1002 ntBASIC11.36□□□□□ -0.59
Col8a2P25318 Gm5559-201ENSMUST00000180755 1002 ntBASIC11.36□□□□□ -0.59
Col8a2P25318 Gm17634-201ENSMUST00000181383 1285 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Col8a2P25318 Gm4335-201ENSMUST00000182581 1004 ntBASIC11.36□□□□□ -0.59
Col8a2P25318 4930432H08Rik-201ENSMUST00000198220 1284 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Col8a2P25318 Mpv17-209ENSMUST00000202241 903 ntAPPRIS ALT1 TSL 3 BASIC11.36□□□□□ -0.59
Col8a2P25318 Nme2-201ENSMUST00000021217 1012 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Col8a2P25318 Taldo1-201ENSMUST00000026576 1229 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Col8a2P25318 2310002L09Rik-201ENSMUST00000030101 958 ntAPPRIS P3 TSL 1 (best) BASIC11.36□□□□□ -0.59
Col8a2P25318 Tada3-203ENSMUST00000099118 1282 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Col8a2P25318 Fbxl5-211ENSMUST00000196483 2814 ntAPPRIS ALT1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Col8a2P25318 Cyp2u1-201ENSMUST00000106337 4378 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Col8a2P25318 Tmem9-201ENSMUST00000063719 1806 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Col8a2P25318 Wwox-202ENSMUST00000109107 2383 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Col8a2P25318 Lmf2-201ENSMUST00000023283 2906 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Col8a2P25318 Luc7l3-202ENSMUST00000107820 3478 ntAPPRIS P1 TSL 5 BASIC11.36□□□□□ -0.59
Col8a2P25318 Zfp612-202ENSMUST00000212754 4863 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Col8a2P25318 Duxf3-202ENSMUST00000176875 2025 ntAPPRIS P1 BASIC11.36□□□□□ -0.59
Col8a2P25318 Rab39-201ENSMUST00000068449 2971 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Col8a2P25318 Ilvbl-203ENSMUST00000218215 2331 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Col8a2P25318 Cxadr-202ENSMUST00000114229 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Col8a2P25318 Smarcb1-201ENSMUST00000000925 1660 ntAPPRIS P3 TSL 1 (best) BASIC11.36□□□□□ -0.59
Col8a2P25318 Nkain3-201ENSMUST00000102998 3098 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Col8a2P25318 Ints13-201ENSMUST00000032427 3059 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Col8a2P25318 Gm20546-201ENSMUST00000173141 1889 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Col8a2P25318 Wrap53-201ENSMUST00000048139 1891 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Col8a2P25318 Gm11978-202ENSMUST00000127510 1303 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Col8a2P25318 Scfd2-203ENSMUST00000113542 2279 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Col8a2P25318 Celf5-201ENSMUST00000118763 4391 ntAPPRIS P3 TSL 1 (best) BASIC11.35□□□□□ -0.59
Col8a2P25318 Uqcrq-201ENSMUST00000061326 1521 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Col8a2P25318 Tcirg1-201ENSMUST00000001801 2688 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Col8a2P25318 Gm11732-201ENSMUST00000151381 1742 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Col8a2P25318 Sgsm3-208ENSMUST00000139517 2996 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Col8a2P25318 Ephx2-201ENSMUST00000070515 2035 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Col8a2P25318 Unc5b-203ENSMUST00000218637 3653 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Col8a2P25318 Ints3-203ENSMUST00000196530 3778 ntAPPRIS ALT2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Col8a2P25318 Gm12500-202ENSMUST00000186471 2428 ntBASIC11.35□□□□□ -0.59
Col8a2P25318 Ctsa-203ENSMUST00000103093 2534 ntAPPRIS ALT2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Col8a2P25318 Scp2-201ENSMUST00000030340 2640 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Col8a2P25318 Arid4b-202ENSMUST00000110533 3020 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Col8a2P25318 Gm12928-201ENSMUST00000117115 573 ntBASIC11.35□□□□□ -0.59
Col8a2P25318 Gm6244-201ENSMUST00000178732 841 ntBASIC11.35□□□□□ -0.59
Col8a2P25318 Gm8652-201ENSMUST00000181363 964 ntBASIC11.35□□□□□ -0.59
Col8a2P25318 Psmc3ip-201ENSMUST00000019447 1291 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Col8a2P25318 Fam24a-203ENSMUST00000207784 600 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Col8a2P25318 Atp5d-201ENSMUST00000003156 931 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Col8a2P25318 Car5a-201ENSMUST00000057653 1249 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Col8a2P25318 Gm8973-201ENSMUST00000079818 315 ntAPPRIS P1 BASIC11.35□□□□□ -0.59
Col8a2P25318 Iqcf4-201ENSMUST00000085111 756 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Col8a2P25318 Aip-202ENSMUST00000117831 1378 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Col8a2P25318 Lrp10-201ENSMUST00000022782 4228 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Col8a2P25318 D830030K20Rik-201ENSMUST00000112797 1695 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Col8a2P25318 Zfp354c-201ENSMUST00000000632 1683 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Col8a2P25318 Eif4g1-201ENSMUST00000044783 5444 ntAPPRIS P3 TSL 1 (best) BASIC11.35□□□□□ -0.59
Col8a2P25318 Dok7-203ENSMUST00000114270 2779 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Col8a2P25318 Gsg1l-201ENSMUST00000073935 3923 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Col8a2P25318 Radil-204ENSMUST00000110785 3708 ntAPPRIS ALT2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Col8a2P25318 Wbp11-201ENSMUST00000116514 2739 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Col8a2P25318 4833439L19Rik-201ENSMUST00000026989 2727 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Col8a2P25318 Ctps-201ENSMUST00000030381 2705 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Col8a2P25318 Alox12e-201ENSMUST00000019051 2422 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Col8a2P25318 Chd4-201ENSMUST00000056889 6697 ntAPPRIS P2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Col8a2P25318 Nek1-202ENSMUST00000120689 5478 ntAPPRIS ALT2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Col8a2P25318 Ppcdc-209ENSMUST00000214624 1814 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Col8a2P25318 Gm12280-201ENSMUST00000155836 1624 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Col8a2P25318 Dlk2-201ENSMUST00000061722 1532 ntTSL 5 BASIC11.35□□□□□ -0.59
Col8a2P25318 Apbb1-213ENSMUST00000189265 1429 ntTSL 5 BASIC11.35□□□□□ -0.59
Col8a2P25318 Hp-201ENSMUST00000074898 1345 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Col8a2P25318 Kcnma1-228ENSMUST00000224468 3753 ntAPPRIS ALT2 BASIC11.35□□□□□ -0.59
Col8a2P25318 Ankrd6-204ENSMUST00000084750 4444 ntAPPRIS P2 TSL 5 BASIC11.34□□□□□ -0.59
Col8a2P25318 Metap2-206ENSMUST00000180840 2551 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Col8a2P25318 Gm43273-201ENSMUST00000199649 2594 ntBASIC11.34□□□□□ -0.59
Col8a2P25318 P4ha1-202ENSMUST00000092512 2387 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Col8a2P25318 Hapln4-201ENSMUST00000007738 3648 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Col8a2P25318 Fndc3a-201ENSMUST00000089017 6143 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Col8a2P25318 Gm12626-201ENSMUST00000117339 1983 ntBASIC11.34□□□□□ -0.59
Col8a2P25318 Gm12623-201ENSMUST00000119849 1983 ntBASIC11.34□□□□□ -0.59
Col8a2P25318 Ccno-201ENSMUST00000038404 1875 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Col8a2P25318 Alkbh4-201ENSMUST00000041100 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Col8a2P25318 Myo15b-202ENSMUST00000093911 9340 ntAPPRIS P1 TSL 5 BASIC11.34□□□□□ -0.59
Col8a2P25318 Gnb1l-211ENSMUST00000167778 3569 ntAPPRIS P3 TSL 1 (best) BASIC11.34□□□□□ -0.59
Col8a2P25318 2810474O19Rik-202ENSMUST00000100765 5356 ntAPPRIS P2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Col8a2P25318 Dlc1-203ENSMUST00000098826 6241 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Col8a2P25318 Nat3-201ENSMUST00000070514 1395 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Col8a2P25318 Gm37912-201ENSMUST00000191895 3076 ntBASIC11.34□□□□□ -0.59
Col8a2P25318 Cox16-202ENSMUST00000110340 668 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Retrieved 100 of 76,532 protein–RNA pairs in 42.4 ms