Protein–RNA interactions for Protein: P20615

Hoxb9, Homeobox protein Hox-B9, mousemouse

Predictions only

Length 250 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxb9P20615 Tnks1bp1-202ENSMUST00000111605 5747 ntAPPRIS P2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Hoxb9P20615 Olfr56-201ENSMUST00000056759 1925 ntTSL 5 BASIC13.03□□□□□ -0.32
Hoxb9P20615 Rhbdl3-201ENSMUST00000017836 3736 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Hoxb9P20615 Noxa1-202ENSMUST00000114373 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Hoxb9P20615 Hadhb-203ENSMUST00000114786 2048 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Hoxb9P20615 Gm11190-201ENSMUST00000132487 3414 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Hoxb9P20615 AU040320-201ENSMUST00000047431 4384 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Hoxb9P20615 Rnf10-203ENSMUST00000112097 3476 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Hoxb9P20615 Dnmt3l-208ENSMUST00000151242 1657 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Hoxb9P20615 Cdk5r1-201ENSMUST00000053413 4162 ntAPPRIS P1 BASIC13.03□□□□□ -0.32
Hoxb9P20615 Rgs3-201ENSMUST00000065870 4698 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Hoxb9P20615 Ddx27-201ENSMUST00000018143 2714 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Hoxb9P20615 Trav3d-3-201ENSMUST00000103599 276 ntAPPRIS P1 BASIC13.03□□□□□ -0.32
Hoxb9P20615 Trav3n-3-201ENSMUST00000103625 276 ntAPPRIS P1 BASIC13.03□□□□□ -0.32
Hoxb9P20615 Pmvk-202ENSMUST00000107410 652 ntTSL 5 BASIC13.03□□□□□ -0.32
Hoxb9P20615 Gm15678-201ENSMUST00000117573 960 ntBASIC13.03□□□□□ -0.32
Hoxb9P20615 Gm14057-201ENSMUST00000120631 482 ntBASIC13.03□□□□□ -0.32
Hoxb9P20615 Arf5-202ENSMUST00000169841 768 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
Hoxb9P20615 1700022A21Rik-201ENSMUST00000182745 1051 ntBASIC13.03□□□□□ -0.32
Hoxb9P20615 Trav3-3-202ENSMUST00000183835 276 ntAPPRIS P1 BASIC13.03□□□□□ -0.32
Hoxb9P20615 H2-Bl-209ENSMUST00000194244 862 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Hoxb9P20615 AC158982.1-201ENSMUST00000228377 901 ntBASIC13.03□□□□□ -0.32
Hoxb9P20615 Fuom-201ENSMUST00000026539 685 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Hoxb9P20615 Myoz3-201ENSMUST00000056533 870 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Hoxb9P20615 Pdxk-ps-201ENSMUST00000159650 2342 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Hoxb9P20615 9130011E15Rik-201ENSMUST00000045396 2896 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
Hoxb9P20615 Scn4b-201ENSMUST00000060125 4982 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Hoxb9P20615 Aifm2-202ENSMUST00000080099 1329 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Hoxb9P20615 Gm20546-201ENSMUST00000173141 1889 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Hoxb9P20615 Gm7899-201ENSMUST00000192935 1897 ntBASIC13.03□□□□□ -0.32
Hoxb9P20615 Osbpl8-201ENSMUST00000095310 3622 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
Hoxb9P20615 Sall4-202ENSMUST00000075044 2534 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Hoxb9P20615 Adsl-206ENSMUST00000168756 1439 ntTSL 5 BASIC13.03□□□□□ -0.32
Hoxb9P20615 Cgn-201ENSMUST00000107272 4963 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Hoxb9P20615 Gemin5-205ENSMUST00000172035 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Hoxb9P20615 Gm45242-201ENSMUST00000210666 2129 ntBASIC13.03□□□□□ -0.32
Hoxb9P20615 Cd81-201ENSMUST00000037941 1533 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Hoxb9P20615 5830418P13Rik-201ENSMUST00000143564 2178 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Hoxb9P20615 Cep164-204ENSMUST00000213154 6105 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.32
Hoxb9P20615 Hnrnpf-203ENSMUST00000167182 2271 ntAPPRIS P1 TSL 3 BASIC13.02□□□□□ -0.32
Hoxb9P20615 Gm7324-201ENSMUST00000094051 1647 ntAPPRIS P1 BASIC13.02□□□□□ -0.32
Hoxb9P20615 Tnn-201ENSMUST00000039178 5817 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Hoxb9P20615 Pdlim5-208ENSMUST00000196220 1725 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.32
Hoxb9P20615 Fgd6-201ENSMUST00000020208 8044 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Hoxb9P20615 Map7d1-202ENSMUST00000106132 3195 ntAPPRIS ALT2 TSL 2 BASIC13.02□□□□□ -0.32
Hoxb9P20615 Bhmt-201ENSMUST00000099309 2490 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Hoxb9P20615 Ap1s2-201ENSMUST00000033734 1785 ntAPPRIS ALT1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Hoxb9P20615 Scube1-201ENSMUST00000016907 3991 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.32
Hoxb9P20615 Gm38346-201ENSMUST00000192379 2639 ntBASIC13.02□□□□□ -0.32
Hoxb9P20615 Cep170b-203ENSMUST00000179041 6565 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.32
Hoxb9P20615 Peli1-201ENSMUST00000093290 3514 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Hoxb9P20615 Ildr2-201ENSMUST00000111416 8251 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.32
Hoxb9P20615 B230359F08Rik-201ENSMUST00000103671 426 ntAPPRIS P1 BASIC13.02□□□□□ -0.33
Hoxb9P20615 Gm11524-201ENSMUST00000119349 807 ntBASIC13.02□□□□□ -0.33
Hoxb9P20615 Gm12485-201ENSMUST00000119641 291 ntBASIC13.02□□□□□ -0.33
Hoxb9P20615 Gm20479-201ENSMUST00000126587 556 ntAPPRIS P1 TSL 3 BASIC13.02□□□□□ -0.33
Hoxb9P20615 Gm12212-201ENSMUST00000141032 378 ntTSL 3 BASIC13.02□□□□□ -0.33
Hoxb9P20615 Prr29-203ENSMUST00000185986 983 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.33
Hoxb9P20615 Gm45552-201ENSMUST00000209340 778 ntTSL 3 BASIC13.02□□□□□ -0.33
Hoxb9P20615 Gm7730-201ENSMUST00000212486 454 ntBASIC13.02□□□□□ -0.33
Hoxb9P20615 AC125206.2-201ENSMUST00000217454 574 ntBASIC13.02□□□□□ -0.33
Hoxb9P20615 Gm17870-201ENSMUST00000219489 1174 ntBASIC13.02□□□□□ -0.33
Hoxb9P20615 Gm6218-201ENSMUST00000219812 628 ntBASIC13.02□□□□□ -0.33
Hoxb9P20615 Srd5a2-201ENSMUST00000043458 854 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Hoxb9P20615 Ccdc106-202ENSMUST00000108571 1318 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Hoxb9P20615 Sema3b-205ENSMUST00000102532 3191 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Hoxb9P20615 Prickle3-201ENSMUST00000033485 2301 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Hoxb9P20615 Rbm34-201ENSMUST00000045994 3424 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Hoxb9P20615 Ldb3-207ENSMUST00000227819 1499 ntBASIC13.02□□□□□ -0.33
Hoxb9P20615 Ctsa-203ENSMUST00000103093 2534 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Hoxb9P20615 Sgce-207ENSMUST00000126151 1522 ntTSL 5 BASIC13.02□□□□□ -0.33
Hoxb9P20615 Zfp583-201ENSMUST00000062765 2550 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Hoxb9P20615 Neil1-203ENSMUST00000190245 1693 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Hoxb9P20615 Rnf224-202ENSMUST00000205192 1707 ntAPPRIS P1 BASIC13.02□□□□□ -0.33
Hoxb9P20615 Hlcs-202ENSMUST00000163193 5371 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Hoxb9P20615 Uckl1-201ENSMUST00000057816 1849 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Hoxb9P20615 Gm43134-201ENSMUST00000199434 1886 ntBASIC13.02□□□□□ -0.33
Hoxb9P20615 Gigyf2-201ENSMUST00000027475 5724 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.33
Hoxb9P20615 Gm29530-201ENSMUST00000187556 1956 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Hoxb9P20615 Mctp1-204ENSMUST00000125209 4715 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Hoxb9P20615 Gm4782-201ENSMUST00000168705 2046 ntBASIC13.01□□□□□ -0.33
Hoxb9P20615 Galns-203ENSMUST00000212319 2111 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Hoxb9P20615 S100pbp-205ENSMUST00000117350 2241 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Hoxb9P20615 Rabep2-201ENSMUST00000106405 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Hoxb9P20615 Scg3-201ENSMUST00000034699 2384 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Hoxb9P20615 Pcdh7-203ENSMUST00000191837 8785 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Hoxb9P20615 Opa3-201ENSMUST00000063976 3366 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Hoxb9P20615 Chchd7-208ENSMUST00000121651 620 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Hoxb9P20615 Pigyl-201ENSMUST00000123680 695 ntAPPRIS P1 TSL 2 BASIC13.01□□□□□ -0.33
Hoxb9P20615 Rpl34-203ENSMUST00000133802 711 ntTSL 2 BASIC13.01□□□□□ -0.33
Hoxb9P20615 Gm20661-203ENSMUST00000177368 900 ntAPPRIS P1 TSL 2 BASIC13.01□□□□□ -0.33
Hoxb9P20615 Smyd3-207ENSMUST00000194237 1047 ntTSL 2 BASIC13.01□□□□□ -0.33
Hoxb9P20615 1810059H22Rik-208ENSMUST00000204941 642 ntTSL 2 BASIC13.01□□□□□ -0.33
Hoxb9P20615 Gm44855-201ENSMUST00000205725 362 ntBASIC13.01□□□□□ -0.33
Hoxb9P20615 Chchd7-201ENSMUST00000041122 672 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Hoxb9P20615 Erp29-201ENSMUST00000052590 1123 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Hoxb9P20615 Gm5129-201ENSMUST00000065372 300 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
Hoxb9P20615 Ccdc58-201ENSMUST00000099937 747 ntTSL 3 BASIC13.01□□□□□ -0.33
Hoxb9P20615 Rhog-202ENSMUST00000106923 1321 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
Hoxb9P20615 Hp-201ENSMUST00000074898 1345 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 39.2 ms