Protein–RNA interactions for Protein: P06798

Hoxa4, Homeobox protein Hox-A4, mousemouse

Predictions only

Length 285 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxa4P06798 Cntf-201ENSMUST00000112933 1073 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Hoxa4P06798 Rbmx-202ENSMUST00000114726 2108 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Hoxa4P06798 Rpl17-ps5-201ENSMUST00000121001 555 ntBASIC13.38□□□□□ -0.27
Hoxa4P06798 Gm12138-201ENSMUST00000122180 951 ntBASIC13.38□□□□□ -0.27
Hoxa4P06798 Rpl18a-ps1-201ENSMUST00000161190 523 ntBASIC13.38□□□□□ -0.27
Hoxa4P06798 Ighv2-3-201ENSMUST00000178229 347 ntAPPRIS P1 BASIC13.38□□□□□ -0.27
Hoxa4P06798 Gm37047-201ENSMUST00000191992 533 ntTSL 5 BASIC13.38□□□□□ -0.27
Hoxa4P06798 Psmc3ip-201ENSMUST00000019447 1291 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Hoxa4P06798 Gm5276-201ENSMUST00000196683 1047 ntBASIC13.38□□□□□ -0.27
Hoxa4P06798 Gm7287-201ENSMUST00000205267 602 ntBASIC13.38□□□□□ -0.27
Hoxa4P06798 Nudt17-201ENSMUST00000029742 1039 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Hoxa4P06798 Csrp3-201ENSMUST00000032658 877 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Hoxa4P06798 Myocd-202ENSMUST00000102635 4935 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
Hoxa4P06798 N6amt1-203ENSMUST00000118310 1700 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Hoxa4P06798 Tjap1-203ENSMUST00000180283 2368 ntAPPRIS P2 TSL 5 BASIC13.38□□□□□ -0.27
Hoxa4P06798 Kcnc4-201ENSMUST00000009617 3667 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Hoxa4P06798 Rxrg-202ENSMUST00000111380 1630 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Hoxa4P06798 Mast3-201ENSMUST00000166004 5305 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
Hoxa4P06798 Adgrb2-206ENSMUST00000106018 4470 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
Hoxa4P06798 Gm5912-201ENSMUST00000122282 1438 ntBASIC13.38□□□□□ -0.27
Hoxa4P06798 Gm15163-201ENSMUST00000120749 1302 ntBASIC13.38□□□□□ -0.27
Hoxa4P06798 Olfm1-202ENSMUST00000100244 2686 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Hoxa4P06798 Dnmt3l-208ENSMUST00000151242 1657 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Hoxa4P06798 Gm11946-201ENSMUST00000123459 3941 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Hoxa4P06798 Umad1-204ENSMUST00000159433 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Hoxa4P06798 Golim4-208ENSMUST00000167078 2902 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
Hoxa4P06798 Ephx2-201ENSMUST00000070515 2035 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Hoxa4P06798 Lrrc8a-202ENSMUST00000113654 4194 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
Hoxa4P06798 Vps26b-201ENSMUST00000034470 3575 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Hoxa4P06798 Gm11555-202ENSMUST00000104929 638 ntAPPRIS P1 BASIC13.37□□□□□ -0.27
Hoxa4P06798 Tbx3os1-203ENSMUST00000140101 490 ntTSL 3 BASIC13.37□□□□□ -0.27
Hoxa4P06798 Cpne8-201ENSMUST00000014777 697 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Hoxa4P06798 Gm20412-201ENSMUST00000173249 633 ntTSL 5 BASIC13.37□□□□□ -0.27
Hoxa4P06798 4930449I04Rik-201ENSMUST00000198191 1123 ntBASIC13.37□□□□□ -0.27
Hoxa4P06798 Gm43240-201ENSMUST00000198543 630 ntTSL 3 BASIC13.37□□□□□ -0.27
Hoxa4P06798 Gm7653-201ENSMUST00000214567 508 ntBASIC13.37□□□□□ -0.27
Hoxa4P06798 Gm17794-201ENSMUST00000220252 955 ntBASIC13.37□□□□□ -0.27
Hoxa4P06798 AC173210.1-201ENSMUST00000222341 1131 ntBASIC13.37□□□□□ -0.27
Hoxa4P06798 AC110817.1-201ENSMUST00000225706 605 ntBASIC13.37□□□□□ -0.27
Hoxa4P06798 Emc4-201ENSMUST00000028551 983 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Hoxa4P06798 Tada3-203ENSMUST00000099118 1282 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Hoxa4P06798 Ttll5-203ENSMUST00000095536 4150 ntAPPRIS ALT2 TSL 2 BASIC13.37□□□□□ -0.27
Hoxa4P06798 Lysmd3-201ENSMUST00000049055 2338 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Hoxa4P06798 Zfp747-201ENSMUST00000067425 2684 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Hoxa4P06798 Kcnf1-201ENSMUST00000170580 4789 ntAPPRIS P1 BASIC13.37□□□□□ -0.27
Hoxa4P06798 Gm26852-201ENSMUST00000180691 5751 ntTSL 5 BASIC13.37□□□□□ -0.27
Hoxa4P06798 Ccp110-202ENSMUST00000106557 5073 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Hoxa4P06798 Mos-201ENSMUST00000105158 1449 ntAPPRIS P1 BASIC13.37□□□□□ -0.27
Hoxa4P06798 AU040320-202ENSMUST00000102607 4191 ntAPPRIS P4 TSL 1 (best) BASIC13.37□□□□□ -0.27
Hoxa4P06798 Agpat4-201ENSMUST00000024594 1915 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Hoxa4P06798 Sh3glb1-201ENSMUST00000163279 3961 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Hoxa4P06798 Zbtb46-201ENSMUST00000029106 5309 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
Hoxa4P06798 Tmem220-201ENSMUST00000061786 1597 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Hoxa4P06798 A530083I20Rik-201ENSMUST00000180486 2421 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Hoxa4P06798 Lpar1-201ENSMUST00000055018 3512 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
Hoxa4P06798 Dhx9-201ENSMUST00000042141 4616 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
Hoxa4P06798 Togaram2-205ENSMUST00000153445 3302 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
Hoxa4P06798 Gm26747-201ENSMUST00000180597 1716 ntTSL 5 BASIC13.36□□□□□ -0.27
Hoxa4P06798 Arhgap4-204ENSMUST00000114406 2749 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Hoxa4P06798 Mapt-201ENSMUST00000100347 1362 ntAPPRIS P4 TSL 1 (best) BASIC13.36□□□□□ -0.27
Hoxa4P06798 Lrp2bp-202ENSMUST00000110380 1603 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Hoxa4P06798 Lifr-201ENSMUST00000067190 4143 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
Hoxa4P06798 Tfe3-201ENSMUST00000077680 3277 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Hoxa4P06798 Micu1-202ENSMUST00000092508 2294 ntAPPRIS ALT1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Hoxa4P06798 Fbxw17-201ENSMUST00000046974 1798 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Hoxa4P06798 Pigg-203ENSMUST00000119014 4573 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
Hoxa4P06798 Ebf4-201ENSMUST00000110286 2670 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Hoxa4P06798 B930092H01Rik-201ENSMUST00000213377 2678 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Hoxa4P06798 Lamtor2-202ENSMUST00000119002 568 ntTSL 2 BASIC13.36□□□□□ -0.27
Hoxa4P06798 Mrps10-202ENSMUST00000119841 1113 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Hoxa4P06798 Gm12960-201ENSMUST00000120017 1066 ntBASIC13.36□□□□□ -0.27
Hoxa4P06798 Gm11400-201ENSMUST00000120853 1214 ntBASIC13.36□□□□□ -0.27
Hoxa4P06798 Cd209g-201ENSMUST00000130372 1169 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Hoxa4P06798 4930407G08Rik-201ENSMUST00000145831 698 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Hoxa4P06798 Kctd17-202ENSMUST00000159771 986 ntAPPRIS ALT2 TSL 2 BASIC13.36□□□□□ -0.27
Hoxa4P06798 Bik-201ENSMUST00000016902 943 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Hoxa4P06798 Prss55-203ENSMUST00000171503 1074 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Hoxa4P06798 Gm26854-201ENSMUST00000180418 705 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Hoxa4P06798 2810429I04Rik-210ENSMUST00000189464 868 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Hoxa4P06798 Gm29608-201ENSMUST00000190444 463 ntBASIC13.36□□□□□ -0.27
Hoxa4P06798 Gm34086-201ENSMUST00000196486 743 ntTSL 3 BASIC13.36□□□□□ -0.27
Hoxa4P06798 Itm2b-204ENSMUST00000228637 783 ntBASIC13.36□□□□□ -0.27
Hoxa4P06798 Tmem116-201ENSMUST00000031405 1288 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Hoxa4P06798 Wdr74-201ENSMUST00000049424 1204 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Hoxa4P06798 Il27-201ENSMUST00000058429 1021 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Hoxa4P06798 5830432E09Rik-203ENSMUST00000210953 2428 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Hoxa4P06798 Impad1-201ENSMUST00000084949 6543 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Hoxa4P06798 AC096628.2-201ENSMUST00000225443 1413 ntBASIC13.36□□□□□ -0.27
Hoxa4P06798 Fbrs-202ENSMUST00000205432 4166 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
Hoxa4P06798 Usp33-201ENSMUST00000026507 4153 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Hoxa4P06798 Rps6ka5-209ENSMUST00000222731 5642 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Hoxa4P06798 Clip2-201ENSMUST00000036999 4893 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Hoxa4P06798 Cdk18-201ENSMUST00000027697 4355 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Hoxa4P06798 Klc2-201ENSMUST00000025798 2940 ntTSL 5 BASIC13.36□□□□□ -0.27
Hoxa4P06798 Src-202ENSMUST00000092576 3887 ntTSL 5 BASIC13.36□□□□□ -0.27
Hoxa4P06798 Atp5f1-201ENSMUST00000118209 1604 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
Hoxa4P06798 Ctps-201ENSMUST00000030381 2705 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Hoxa4P06798 Araf-203ENSMUST00000122312 2854 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Hoxa4P06798 Epb41l1-202ENSMUST00000103135 6177 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
Hoxa4P06798 Chd3-201ENSMUST00000092971 6066 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 28.3 ms