Protein–RNA interactions for Protein: O54785

Limk2, LIM domain kinase 2, mousemouse

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Limk2O54785 Tsc2-221ENSMUST00000228412 5432 ntAPPRIS ALT2 BASIC13.82□□□□□ -0.2
Limk2O54785 Rbfox3-201ENSMUST00000017576 3150 ntAPPRIS P4 TSL 1 (best) BASIC13.82□□□□□ -0.2
Limk2O54785 Tpr-203ENSMUST00000124973 7430 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Limk2O54785 Hp1bp3-204ENSMUST00000105826 3348 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
Limk2O54785 Gm2420-202ENSMUST00000202224 2249 ntBASIC13.82□□□□□ -0.2
Limk2O54785 Litaf-201ENSMUST00000023143 2235 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Limk2O54785 Aldh1a2-201ENSMUST00000034723 2264 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Limk2O54785 Rusc1-202ENSMUST00000090929 3706 ntAPPRIS P4 TSL 1 (best) BASIC13.81□□□□□ -0.2
Limk2O54785 Zfp568-203ENSMUST00000148442 4005 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
Limk2O54785 Iffo2-202ENSMUST00000123827 2036 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
Limk2O54785 Kif3c-205ENSMUST00000220210 4144 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Limk2O54785 Cplx4-201ENSMUST00000025397 1751 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Limk2O54785 Kyat1-204ENSMUST00000113661 2057 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Limk2O54785 Gypc-202ENSMUST00000174000 2072 ntAPPRIS ALT2 TSL 3 BASIC13.81□□□□□ -0.2
Limk2O54785 Dpp3-201ENSMUST00000025851 2683 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Limk2O54785 Lmx1b-201ENSMUST00000041730 4790 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Limk2O54785 9030612E09Rik-201ENSMUST00000053792 1859 ntAPPRIS P1 BASIC13.81□□□□□ -0.2
Limk2O54785 Nedd8-201ENSMUST00000010520 824 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Limk2O54785 Plod1-202ENSMUST00000105712 1059 ntTSL 2 BASIC13.81□□□□□ -0.2
Limk2O54785 Unc50-202ENSMUST00000114925 1094 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Limk2O54785 Apoc3-203ENSMUST00000121916 709 ntTSL 2 BASIC13.81□□□□□ -0.2
Limk2O54785 4930456L15Rik-201ENSMUST00000145577 1185 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Limk2O54785 Tnni1-205ENSMUST00000148201 1150 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
Limk2O54785 Tnni1-206ENSMUST00000152075 1038 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
Limk2O54785 Tnni1-207ENSMUST00000152208 1105 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
Limk2O54785 Mrps24-205ENSMUST00000154330 995 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Limk2O54785 Gm42921-201ENSMUST00000196670 655 ntTSL 2 BASIC13.81□□□□□ -0.2
Limk2O54785 Gm43303-201ENSMUST00000200133 669 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Limk2O54785 Hddc3-208ENSMUST00000206122 696 ntTSL 3 BASIC13.81□□□□□ -0.2
Limk2O54785 Olfr142-201ENSMUST00000099752 918 ntAPPRIS P1 BASIC13.81□□□□□ -0.2
Limk2O54785 Tpgs2-201ENSMUST00000115817 4159 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
Limk2O54785 AC159649.2-201ENSMUST00000222984 3223 ntBASIC13.81□□□□□ -0.2
Limk2O54785 Col1a1-201ENSMUST00000001547 5930 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Limk2O54785 Ilvbl-203ENSMUST00000218215 2331 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Limk2O54785 Iqcm-203ENSMUST00000212704 2035 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Limk2O54785 Gcat-201ENSMUST00000006544 2365 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Limk2O54785 Kctd20-203ENSMUST00000118762 3839 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Limk2O54785 Grin1-203ENSMUST00000114308 4165 ntTSL 5 BASIC13.81□□□□□ -0.2
Limk2O54785 Kcnj12-201ENSMUST00000041944 2459 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Limk2O54785 Asb10-202ENSMUST00000117900 1432 ntTSL 5 BASIC13.81□□□□□ -0.2
Limk2O54785 4930473A02Rik-202ENSMUST00000136793 1409 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Limk2O54785 Mib2-201ENSMUST00000103176 3642 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Limk2O54785 Decr2-201ENSMUST00000040907 2187 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Limk2O54785 Ttc5-201ENSMUST00000006451 1842 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Limk2O54785 Slc39a3-201ENSMUST00000059551 3680 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Limk2O54785 Knop1-203ENSMUST00000106549 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Limk2O54785 Trpc7-206ENSMUST00000173513 2241 ntTSL 5 BASIC13.8□□□□□ -0.2
Limk2O54785 Nek7-201ENSMUST00000027642 3737 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Limk2O54785 Ccno-201ENSMUST00000038404 1875 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Limk2O54785 Cxcr5-201ENSMUST00000062215 2614 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Limk2O54785 Ick-203ENSMUST00000117330 2698 ntAPPRIS ALT2 TSL 2 BASIC13.8□□□□□ -0.2
Limk2O54785 Anks1b-204ENSMUST00000179337 2692 ntTSL 5 BASIC13.8□□□□□ -0.2
Limk2O54785 Eya4-206ENSMUST00000219315 3100 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
Limk2O54785 AC139350.1-201ENSMUST00000227064 1594 ntBASIC13.8□□□□□ -0.2
Limk2O54785 Taf3-201ENSMUST00000026888 4792 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Limk2O54785 Cyp4x1os-201ENSMUST00000153951 2003 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Limk2O54785 Gm35721-201ENSMUST00000220294 2014 ntTSL 5 BASIC13.8□□□□□ -0.2
Limk2O54785 Eif1ad-201ENSMUST00000025759 2469 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Limk2O54785 Cgn-201ENSMUST00000107272 4963 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Limk2O54785 Plekha1-203ENSMUST00000120441 3777 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
Limk2O54785 Phka1-201ENSMUST00000043596 5938 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Limk2O54785 Nmi-202ENSMUST00000112705 1130 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Limk2O54785 Mrps10-202ENSMUST00000119841 1113 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Limk2O54785 Gm14730-201ENSMUST00000122378 1045 ntBASIC13.8□□□□□ -0.2
Limk2O54785 Rapgef3os2-201ENSMUST00000124374 920 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Limk2O54785 C430049B03Rik-201ENSMUST00000129764 868 ntTSL 3 BASIC13.8□□□□□ -0.2
Limk2O54785 Zfp414-204ENSMUST00000166627 1211 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Limk2O54785 Il31-203ENSMUST00000198901 984 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Limk2O54785 Gm43630-201ENSMUST00000201550 776 ntBASIC13.8□□□□□ -0.2
Limk2O54785 Gm7498-201ENSMUST00000203282 1084 ntBASIC13.8□□□□□ -0.2
Limk2O54785 AI463170-204ENSMUST00000220157 447 ntTSL 3 BASIC13.8□□□□□ -0.2
Limk2O54785 Sftpa1-201ENSMUST00000022314 851 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Limk2O54785 Slc12a4-201ENSMUST00000034370 3811 ntAPPRIS ALT1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Limk2O54785 Zfp414-201ENSMUST00000073570 1197 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Limk2O54785 Pcgf1-201ENSMUST00000092614 866 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Limk2O54785 Mfsd1-201ENSMUST00000029344 3011 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Limk2O54785 Ncbp1-201ENSMUST00000030014 3010 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Limk2O54785 Ssh3-202ENSMUST00000113852 2735 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Limk2O54785 Ssh3-201ENSMUST00000037992 2728 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Limk2O54785 Lcmt1-201ENSMUST00000033025 1369 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Limk2O54785 Lrrc8a-202ENSMUST00000113654 4194 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
Limk2O54785 Lzts3-203ENSMUST00000110260 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Limk2O54785 Pcnx3-201ENSMUST00000068169 5276 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Limk2O54785 Prkcb-202ENSMUST00000064989 2911 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
Limk2O54785 Cyp2ab1-205ENSMUST00000182741 1497 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
Limk2O54785 Atrip-201ENSMUST00000045011 2572 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Limk2O54785 Gm14752-201ENSMUST00000120719 2075 ntBASIC13.79□□□□□ -0.2
Limk2O54785 Gm9742-201ENSMUST00000165220 1553 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Limk2O54785 Cln3-203ENSMUST00000098036 1571 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Limk2O54785 Sufu-203ENSMUST00000118440 2663 ntTSL 5 BASIC13.79□□□□□ -0.2
Limk2O54785 Slc37a1-201ENSMUST00000165149 3354 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Limk2O54785 Kif3a-208ENSMUST00000173744 2257 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Limk2O54785 Kcng1-202ENSMUST00000109191 4089 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
Limk2O54785 Osbpl8-201ENSMUST00000095310 3622 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
Limk2O54785 Dnajb12-205ENSMUST00000147914 3041 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Limk2O54785 Mmp21-201ENSMUST00000033278 1858 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Limk2O54785 Mcoln2-201ENSMUST00000011152 2520 ntAPPRIS P4 TSL 1 (best) BASIC13.79□□□□□ -0.2
Limk2O54785 1810058I24Rik-203ENSMUST00000152147 2521 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Limk2O54785 Gng4-201ENSMUST00000021734 3179 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Limk2O54785 1700001C02Rik-203ENSMUST00000127815 660 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 63.6 ms