Protein–RNA interactions for Protein: O35701

Matn3, Matrilin-3, mousemouse

Predictions only

Length 481 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Matn3O35701 Ap1s2-201ENSMUST00000033734 1785 ntAPPRIS ALT1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Matn3O35701 Fam13c-202ENSMUST00000105436 3380 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
Matn3O35701 Trim63-201ENSMUST00000030638 1855 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
Matn3O35701 Tctn2-207ENSMUST00000185820 2733 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Matn3O35701 Tspan1-201ENSMUST00000030465 1985 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Matn3O35701 Nynrin-202ENSMUST00000168479 7511 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
Matn3O35701 C130012C08Rik-201ENSMUST00000194287 3665 ntBASIC12.38□□□□□ -0.43
Matn3O35701 Strip2-201ENSMUST00000046028 5370 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Matn3O35701 Gm17018-201ENSMUST00000047057 1345 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Matn3O35701 Jmjd8-205ENSMUST00000133595 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Matn3O35701 Wnt9a-202ENSMUST00000108783 3318 ntAPPRIS P2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Matn3O35701 Arhgap28-201ENSMUST00000024840 5322 ntAPPRIS P2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Matn3O35701 Mtmr7-202ENSMUST00000048898 2488 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Matn3O35701 Mdga2-201ENSMUST00000037181 9833 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Matn3O35701 Gsn-201ENSMUST00000028239 2653 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
Matn3O35701 Kcnc1-203ENSMUST00000160433 3156 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Matn3O35701 Map4k2-201ENSMUST00000025897 4644 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Matn3O35701 Kif5c-201ENSMUST00000028102 6856 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Matn3O35701 Rnf214-201ENSMUST00000058720 3964 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
Matn3O35701 Clcnka-202ENSMUST00000105790 2511 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Matn3O35701 Gpd1l-202ENSMUST00000129305 2543 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Matn3O35701 E130218I03Rik-203ENSMUST00000125921 666 ntAPPRIS P1 TSL 2 BASIC12.37□□□□□ -0.43
Matn3O35701 2200002J24Rik-201ENSMUST00000013227 333 ntAPPRIS P1 TSL 3 BASIC12.37□□□□□ -0.43
Matn3O35701 E130218I03Rik-206ENSMUST00000135228 544 ntAPPRIS P1 TSL 3 BASIC12.37□□□□□ -0.43
Matn3O35701 E130218I03Rik-207ENSMUST00000143448 591 ntAPPRIS P1 TSL 3 BASIC12.37□□□□□ -0.43
Matn3O35701 1190007I07Rik-202ENSMUST00000176200 586 ntAPPRIS P1 TSL 2 BASIC12.37□□□□□ -0.43
Matn3O35701 1190007I07Rik-203ENSMUST00000183363 406 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Matn3O35701 Gm29520-201ENSMUST00000191209 1067 ntTSL 5 BASIC12.37□□□□□ -0.43
Matn3O35701 Gm44608-201ENSMUST00000206827 855 ntBASIC12.37□□□□□ -0.43
Matn3O35701 Zfp787-206ENSMUST00000208746 535 ntTSL 2 BASIC12.37□□□□□ -0.43
Matn3O35701 Zfyve21-206ENSMUST00000222843 705 ntTSL 3 BASIC12.37□□□□□ -0.43
Matn3O35701 Ndufv2-201ENSMUST00000024909 927 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Matn3O35701 Mrpl46-201ENSMUST00000032841 1134 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Matn3O35701 Lce3b-201ENSMUST00000046234 562 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Matn3O35701 1190007I07Rik-201ENSMUST00000079648 716 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Matn3O35701 Dnmt3b-208ENSMUST00000109772 4015 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Matn3O35701 Gm29052-201ENSMUST00000187700 1451 ntTSL 5 BASIC12.37□□□□□ -0.43
Matn3O35701 Gngt2-201ENSMUST00000036088 1587 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Matn3O35701 Cd33-201ENSMUST00000004728 1962 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Matn3O35701 Kif16b-201ENSMUST00000043589 6383 ntAPPRIS P1 TSL 2 BASIC12.37□□□□□ -0.43
Matn3O35701 Cdc73-201ENSMUST00000018337 11586 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Matn3O35701 Ccnk-201ENSMUST00000101055 2627 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
Matn3O35701 Srd5a1-202ENSMUST00000091514 2644 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Matn3O35701 Gm4782-201ENSMUST00000168705 2046 ntBASIC12.37□□□□□ -0.43
Matn3O35701 Pimreg-201ENSMUST00000021164 1513 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Matn3O35701 Pcp2-202ENSMUST00000128566 1447 ntAPPRIS ALT2 TSL 2 BASIC12.37□□□□□ -0.43
Matn3O35701 Zer1-202ENSMUST00000113677 4189 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Matn3O35701 Evc2-201ENSMUST00000056365 4091 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Matn3O35701 4921511I17Rik-201ENSMUST00000220545 1341 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Matn3O35701 Smarca4-204ENSMUST00000174008 5405 ntAPPRIS ALT1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Matn3O35701 Plcb2-202ENSMUST00000102524 5145 ntAPPRIS P3 TSL 2 BASIC12.36□□□□□ -0.43
Matn3O35701 Necab1-201ENSMUST00000041606 4922 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Matn3O35701 Ttpa-203ENSMUST00000121491 2862 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Matn3O35701 Snx29-207ENSMUST00000180792 2667 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
Matn3O35701 Gatad2a-206ENSMUST00000212478 3622 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
Matn3O35701 Cwc27-201ENSMUST00000022228 2071 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Matn3O35701 Ap3m2-201ENSMUST00000163739 3417 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Matn3O35701 Dhx37-201ENSMUST00000169485 4760 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Matn3O35701 Msh4-201ENSMUST00000005630 3325 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
Matn3O35701 2310022A10Rik-204ENSMUST00000187032 1871 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Matn3O35701 Txn2-203ENSMUST00000109747 1778 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Matn3O35701 Lrrc30-201ENSMUST00000097290 1759 ntAPPRIS P1 BASIC12.36□□□□□ -0.43
Matn3O35701 Fam187a-201ENSMUST00000100369 1563 ntAPPRIS P1 BASIC12.36□□□□□ -0.43
Matn3O35701 Ank3-201ENSMUST00000047061 2517 ntTSL 5 BASIC12.36□□□□□ -0.43
Matn3O35701 Sacs-202ENSMUST00000119509 3468 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
Matn3O35701 Fam133b-201ENSMUST00000115527 1491 ntAPPRIS P2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Matn3O35701 Ptpn6-201ENSMUST00000004377 2308 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Matn3O35701 Tspan32-206ENSMUST00000105925 1376 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Matn3O35701 Tppp3-203ENSMUST00000177126 1396 ntAPPRIS P1 TSL 3 BASIC12.36□□□□□ -0.43
Matn3O35701 Specc1-202ENSMUST00000092415 6797 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
Matn3O35701 Zkscan14-203ENSMUST00000198959 2243 ntBASIC12.36□□□□□ -0.43
Matn3O35701 Thap7-201ENSMUST00000100125 1248 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Matn3O35701 Aig1-202ENSMUST00000105534 617 ntTSL 5 BASIC12.36□□□□□ -0.43
Matn3O35701 Dnajc8-206ENSMUST00000105940 772 ntTSL 5 BASIC12.36□□□□□ -0.43
Matn3O35701 Il11ra2-201ENSMUST00000108006 1299 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Matn3O35701 Rph3al-203ENSMUST00000108420 695 ntTSL 3 BASIC12.36□□□□□ -0.43
Matn3O35701 Qdpr-204ENSMUST00000120867 1234 ntTSL 5 BASIC12.36□□□□□ -0.43
Matn3O35701 E530001F21Rik-201ENSMUST00000120991 730 ntBASIC12.36□□□□□ -0.43
Matn3O35701 Rpl34-ps1-201ENSMUST00000121998 354 ntBASIC12.36□□□□□ -0.43
Matn3O35701 Gm13830-202ENSMUST00000144202 381 ntTSL 3 BASIC12.36□□□□□ -0.43
Matn3O35701 Cux2-210ENSMUST00000168288 4697 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
Matn3O35701 Mymx-202ENSMUST00000169137 616 ntAPPRIS P4 TSL 2 BASIC12.36□□□□□ -0.43
Matn3O35701 1810008I18Rik-202ENSMUST00000187848 819 ntTSL 3 BASIC12.36□□□□□ -0.43
Matn3O35701 Cyba-202ENSMUST00000212600 638 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Matn3O35701 Mobp-207ENSMUST00000215512 498 ntTSL 2 BASIC12.36□□□□□ -0.43
Matn3O35701 Pcdhgc3-201ENSMUST00000076807 4687 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Matn3O35701 Rpl34-ps2-201ENSMUST00000081679 354 ntBASIC12.36□□□□□ -0.43
Matn3O35701 Gm10154-201ENSMUST00000084445 354 ntBASIC12.36□□□□□ -0.43
Matn3O35701 Capn11-201ENSMUST00000120717 2591 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Matn3O35701 Tex10-201ENSMUST00000030030 3102 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Matn3O35701 Aire-213ENSMUST00000148469 1618 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Matn3O35701 Ptpn9-201ENSMUST00000034832 4101 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Matn3O35701 Tmem132e-202ENSMUST00000092852 4105 ntAPPRIS ALT2 TSL 2 BASIC12.36□□□□□ -0.43
Matn3O35701 Prpf40a-206ENSMUST00000209364 2833 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
Matn3O35701 Sema3d-201ENSMUST00000030868 6307 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Matn3O35701 Irak1-203ENSMUST00000101458 2052 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
Matn3O35701 Slc12a8-202ENSMUST00000117134 2081 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Matn3O35701 Gm26635-201ENSMUST00000181077 3199 ntTSL 5 BASIC12.36□□□□□ -0.43
Matn3O35701 Smarcd2-203ENSMUST00000106843 2548 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Matn3O35701 Gpa33-202ENSMUST00000060833 2515 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 31.5 ms