Protein–RNA interactions for Protein: O08852

Pkd1, Polycystin-1, mousemouse

Predictions only

Length 4,293 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pkd1O08852 Adh6a-202ENSMUST00000106247 1341 ntAPPRIS P2 TSL 1 (best) BASIC8.33□□□□□ -1.08
Pkd1O08852 Zp3-201ENSMUST00000005073 1323 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
Pkd1O08852 Tspan12-202ENSMUST00000120965 2157 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
Pkd1O08852 Etv5-201ENSMUST00000079601 3975 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
Pkd1O08852 Trav13-1-201ENSMUST00000103651 331 ntAPPRIS P1 BASIC8.33□□□□□ -1.08
Pkd1O08852 Fam53b-205ENSMUST00000106166 1270 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
Pkd1O08852 Gm11595-201ENSMUST00000107440 1200 ntAPPRIS P1 BASIC8.33□□□□□ -1.08
Pkd1O08852 1700088E04Rik-206ENSMUST00000187550 1168 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
Pkd1O08852 1700119H24Rik-201ENSMUST00000187558 588 ntTSL 5 BASIC8.33□□□□□ -1.08
Pkd1O08852 A430050A11Rik-201ENSMUST00000195348 646 ntBASIC8.33□□□□□ -1.08
Pkd1O08852 Gm19166-201ENSMUST00000196041 1063 ntBASIC8.33□□□□□ -1.08
Pkd1O08852 Gm44968-201ENSMUST00000207652 1171 ntTSL 5 BASIC8.33□□□□□ -1.08
Pkd1O08852 Lcn6-201ENSMUST00000059693 1254 ntTSL 5 BASIC8.33□□□□□ -1.08
Pkd1O08852 1700029J07Rik-201ENSMUST00000095323 2740 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
Pkd1O08852 Hnrnpc-211ENSMUST00000228748 1691 ntAPPRIS P5 BASIC8.33□□□□□ -1.08
Pkd1O08852 Lrp11-203ENSMUST00000130590 3220 ntAPPRIS ALT2 TSL 1 (best) BASIC8.33□□□□□ -1.08
Pkd1O08852 Rnf26-208ENSMUST00000185479 2964 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
Pkd1O08852 Nphs1os-201ENSMUST00000152625 1339 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
Pkd1O08852 Tulp2-202ENSMUST00000085331 1525 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
Pkd1O08852 Hoxd3os1-202ENSMUST00000139005 1701 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
Pkd1O08852 Irf3-201ENSMUST00000003284 2031 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
Pkd1O08852 Alox12e-201ENSMUST00000019051 2422 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
Pkd1O08852 Gm43273-201ENSMUST00000199649 2594 ntBASIC8.33□□□□□ -1.08
Pkd1O08852 Tbx3os1-206ENSMUST00000202307 1787 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
Pkd1O08852 Fthl17d-201ENSMUST00000105004 856 ntAPPRIS P1 BASIC8.33□□□□□ -1.08
Pkd1O08852 Rad54b-203ENSMUST00000108306 652 ntTSL 3 BASIC8.33□□□□□ -1.08
Pkd1O08852 Gm14051-201ENSMUST00000131603 377 ntTSL 3 BASIC8.33□□□□□ -1.08
Pkd1O08852 Gm15972-201ENSMUST00000132571 418 ntTSL 2 BASIC8.33□□□□□ -1.08
Pkd1O08852 Gm6963-201ENSMUST00000147879 379 ntBASIC8.33□□□□□ -1.08
Pkd1O08852 Asb17os-201ENSMUST00000156292 496 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
Pkd1O08852 Crhr2-204ENSMUST00000164012 1263 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
Pkd1O08852 Gm17040-202ENSMUST00000170597 889 ntBASIC8.33□□□□□ -1.08
Pkd1O08852 1110002L01Rik-203ENSMUST00000179637 586 ntTSL 5 BASIC8.33□□□□□ -1.08
Pkd1O08852 Vmo1-201ENSMUST00000021179 672 ntAPPRIS P1 TSL 2 BASIC8.33□□□□□ -1.08
Pkd1O08852 Rpl34-202ENSMUST00000079085 480 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
Pkd1O08852 Bmp8b-201ENSMUST00000002457 2940 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
Pkd1O08852 Gm10457-201ENSMUST00000222619 1906 ntTSL 2 BASIC8.33□□□□□ -1.08
Pkd1O08852 Eif1ad-201ENSMUST00000025759 2469 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
Pkd1O08852 Ccdc42os-201ENSMUST00000148019 1335 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
Pkd1O08852 Gm13055-201ENSMUST00000127875 1961 ntTSL 5 BASIC8.33□□□□□ -1.08
Pkd1O08852 Gm9867-201ENSMUST00000192212 2647 ntBASIC8.33□□□□□ -1.08
Pkd1O08852 Kctd20-208ENSMUST00000168507 2400 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
Pkd1O08852 Zfp109-203ENSMUST00000206960 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC8.32□□□□□ -1.08
Pkd1O08852 Spert-204ENSMUST00000169658 1474 ntAPPRIS ALT2 TSL 3 BASIC8.32□□□□□ -1.08
Pkd1O08852 Repin1-201ENSMUST00000009420 3145 ntAPPRIS P3 TSL 1 (best) BASIC8.32□□□□□ -1.08
Pkd1O08852 Cog7-201ENSMUST00000057576 2902 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
Pkd1O08852 Odf2-201ENSMUST00000028128 2376 ntAPPRIS P3 TSL 1 (best) BASIC8.32□□□□□ -1.08
Pkd1O08852 Gm12130-201ENSMUST00000133599 639 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
Pkd1O08852 Gm5616-201ENSMUST00000165252 384 ntBASIC8.32□□□□□ -1.08
Pkd1O08852 Gm8741-201ENSMUST00000174736 384 ntBASIC8.32□□□□□ -1.08
Pkd1O08852 Gm4482-201ENSMUST00000200876 742 ntBASIC8.32□□□□□ -1.08
Pkd1O08852 Fam168a-204ENSMUST00000207564 1083 ntTSL 5 BASIC8.32□□□□□ -1.08
Pkd1O08852 Gm39404-201ENSMUST00000216350 313 ntBASIC8.32□□□□□ -1.08
Pkd1O08852 Tspan8-201ENSMUST00000035563 1244 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
Pkd1O08852 Cthrc1-201ENSMUST00000067072 1166 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
Pkd1O08852 Patz1-205ENSMUST00000110043 3702 ntAPPRIS P1 TSL 5 BASIC8.32□□□□□ -1.08
Pkd1O08852 Fam81a-201ENSMUST00000034749 3703 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
Pkd1O08852 Gjb5-201ENSMUST00000046498 1721 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
Pkd1O08852 Srr-204ENSMUST00000121738 3183 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
Pkd1O08852 Paxbp1-202ENSMUST00000118522 3973 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
Pkd1O08852 Men1-202ENSMUST00000078137 2738 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
Pkd1O08852 Ttc5-201ENSMUST00000006451 1842 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
Pkd1O08852 Phyhd1-202ENSMUST00000091132 1353 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
Pkd1O08852 Gm2673-201ENSMUST00000120958 1608 ntBASIC8.32□□□□□ -1.08
Pkd1O08852 Cspp1-204ENSMUST00000119714 1268 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
Pkd1O08852 D630024D03Rik-201ENSMUST00000126265 720 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
Pkd1O08852 Gm10714-201ENSMUST00000131346 874 ntTSL 2 BASIC8.32□□□□□ -1.08
Pkd1O08852 Malat1-204ENSMUST00000173523 656 ntTSL 3 BASIC8.32□□□□□ -1.08
Pkd1O08852 Gm43916-201ENSMUST00000205062 967 ntBASIC8.32□□□□□ -1.08
Pkd1O08852 Mansc1-201ENSMUST00000047443 2376 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
Pkd1O08852 Etl4-207ENSMUST00000114610 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC8.32□□□□□ -1.08
Pkd1O08852 Them4-201ENSMUST00000049822 1781 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
Pkd1O08852 Sqle-201ENSMUST00000022977 2758 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
Pkd1O08852 Prkcd-203ENSMUST00000112203 1927 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
Pkd1O08852 Phactr2-201ENSMUST00000079698 1934 ntAPPRIS ALT2 TSL 5 BASIC8.32□□□□□ -1.08
Pkd1O08852 Dact1-201ENSMUST00000061273 3650 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
Pkd1O08852 Prpf3-201ENSMUST00000015892 2933 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
Pkd1O08852 Nfatc4-204ENSMUST00000226357 2680 ntAPPRIS ALT2 BASIC8.32□□□□□ -1.08
Pkd1O08852 Ephx2-201ENSMUST00000070515 2035 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
Pkd1O08852 Gm14150-201ENSMUST00000122404 1354 ntBASIC8.32□□□□□ -1.08
Pkd1O08852 Gsdmcl-ps-203ENSMUST00000188367 1375 ntBASIC8.32□□□□□ -1.08
Pkd1O08852 Clcnka-201ENSMUST00000042617 2428 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
Pkd1O08852 6330403L08Rik-202ENSMUST00000187923 5522 ntBASIC8.32□□□□□ -1.08
Pkd1O08852 Dync1i2-202ENSMUST00000100028 2097 ntTSL 5 BASIC8.32□□□□□ -1.08
Pkd1O08852 Creb1-209ENSMUST00000190348 1260 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
Pkd1O08852 AC159205.5-202ENSMUST00000224849 386 ntBASIC8.32□□□□□ -1.08
Pkd1O08852 Wfdc21-201ENSMUST00000070832 434 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
Pkd1O08852 Cd72-204ENSMUST00000107925 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC8.32□□□□□ -1.08
Pkd1O08852 Dcp1b-202ENSMUST00000112777 3313 ntAPPRIS P2 TSL 1 (best) BASIC8.32□□□□□ -1.08
Pkd1O08852 Bscl2-210ENSMUST00000171649 1962 ntAPPRIS P3 TSL 1 (best) BASIC8.32□□□□□ -1.08
Pkd1O08852 Mark2-201ENSMUST00000025921 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC8.32□□□□□ -1.08
Pkd1O08852 Macrod2-206ENSMUST00000110064 4883 ntAPPRIS P2 TSL 1 (best) BASIC8.32□□□□□ -1.08
Pkd1O08852 Prrxl1-202ENSMUST00000186452 2371 ntAPPRIS P1 TSL 5 BASIC8.32□□□□□ -1.08
Pkd1O08852 A630076J17Rik-201ENSMUST00000179399 1358 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
Pkd1O08852 Fam189b-203ENSMUST00000119707 2415 ntTSL 5 BASIC8.32□□□□□ -1.08
Pkd1O08852 Gm9062-201ENSMUST00000117712 727 ntBASIC8.32□□□□□ -1.08
Pkd1O08852 Ripk3-201ENSMUST00000022830 1892 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
Pkd1O08852 Gm10312-201ENSMUST00000078515 489 ntBASIC8.32□□□□□ -1.08
Pkd1O08852 Arhgef33-201ENSMUST00000068175 3260 ntAPPRIS P1 TSL 5 BASIC8.31□□□□□ -1.08
Pkd1O08852 Npas3-204ENSMUST00000223358 3143 ntAPPRIS ALT2 TSL 1 (best) BASIC8.31□□□□□ -1.08
Retrieved 100 of 76,532 protein–RNA pairs in 54.6 ms