Protein–RNA interactions for Protein: F6WEU2

Ccdc188, Coiled-coil domain-containing 188, mousemouse

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc188F6WEU2 Tll1-201ENSMUST00000066166 4767 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Ccdc188F6WEU2 Sh3bp2-203ENSMUST00000118545 3034 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Ccdc188F6WEU2 Kdelr1-205ENSMUST00000211716 1350 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Ccdc188F6WEU2 Trmt2a-203ENSMUST00000115640 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Ccdc188F6WEU2 Ret-202ENSMUST00000088790 4497 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Ccdc188F6WEU2 Tmem53-203ENSMUST00000106434 923 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Ccdc188F6WEU2 Cspp1-204ENSMUST00000119714 1268 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Ccdc188F6WEU2 Mrps17-205ENSMUST00000119985 859 ntAPPRIS P1 TSL 2 BASIC13.63□□□□□ -0.23
Ccdc188F6WEU2 Gm14199-201ENSMUST00000130021 495 ntTSL 2 BASIC13.63□□□□□ -0.23
Ccdc188F6WEU2 Gm37905-201ENSMUST00000195310 341 ntBASIC13.63□□□□□ -0.23
Ccdc188F6WEU2 Gm31224-201ENSMUST00000212682 513 ntTSL 3 BASIC13.63□□□□□ -0.23
Ccdc188F6WEU2 Ddo-207ENSMUST00000216830 806 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Ccdc188F6WEU2 Gm32025-201ENSMUST00000217960 307 ntBASIC13.63□□□□□ -0.23
Ccdc188F6WEU2 AC131997.1-201ENSMUST00000228611 1229 ntBASIC13.63□□□□□ -0.23
Ccdc188F6WEU2 Mrpl30-201ENSMUST00000027256 969 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Ccdc188F6WEU2 Prss34-201ENSMUST00000037453 1216 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Ccdc188F6WEU2 Gm45495-201ENSMUST00000200940 1700 ntBASIC13.63□□□□□ -0.23
Ccdc188F6WEU2 Tapt1-201ENSMUST00000055128 3513 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
Ccdc188F6WEU2 6330537M06Rik-201ENSMUST00000212384 1642 ntBASIC13.63□□□□□ -0.23
Ccdc188F6WEU2 Ubash3b-201ENSMUST00000044155 6354 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Ccdc188F6WEU2 AI839979-202ENSMUST00000201790 1539 ntTSL 2 BASIC13.63□□□□□ -0.23
Ccdc188F6WEU2 9030612E09Rik-201ENSMUST00000053792 1859 ntAPPRIS P1 BASIC13.63□□□□□ -0.23
Ccdc188F6WEU2 Msi2-201ENSMUST00000092794 1855 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Ccdc188F6WEU2 Fam110a-201ENSMUST00000062047 1754 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Ccdc188F6WEU2 Stxbp6-201ENSMUST00000053768 4553 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
Ccdc188F6WEU2 Kcnip4-201ENSMUST00000087395 2366 ntTSL 5 BASIC13.63□□□□□ -0.23
Ccdc188F6WEU2 Lamc1-201ENSMUST00000027752 7622 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Ccdc188F6WEU2 Ren1-201ENSMUST00000094556 1592 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Ccdc188F6WEU2 Tmem183a-201ENSMUST00000049470 3149 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Ccdc188F6WEU2 Gm17767-201ENSMUST00000189410 1470 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Ccdc188F6WEU2 Anapc5-201ENSMUST00000086216 2760 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
Ccdc188F6WEU2 Tbp-202ENSMUST00000117593 2067 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Ccdc188F6WEU2 Tspyl2-201ENSMUST00000044509 2696 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Ccdc188F6WEU2 Cep63-201ENSMUST00000093791 2696 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Ccdc188F6WEU2 Dda1-206ENSMUST00000138892 1738 ntTSL 3 BASIC13.62□□□□□ -0.23
Ccdc188F6WEU2 Zfp318-204ENSMUST00000138127 3936 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
Ccdc188F6WEU2 Spint5-201ENSMUST00000103097 443 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Ccdc188F6WEU2 Gm12266-201ENSMUST00000120311 962 ntBASIC13.62□□□□□ -0.23
Ccdc188F6WEU2 Mocs2-205ENSMUST00000165022 962 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Ccdc188F6WEU2 Tlx1-202ENSMUST00000174617 806 ntTSL 5 BASIC13.62□□□□□ -0.23
Ccdc188F6WEU2 Spint5-202ENSMUST00000180193 443 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
Ccdc188F6WEU2 4930405N21Rik-201ENSMUST00000199950 1200 ntBASIC13.62□□□□□ -0.23
Ccdc188F6WEU2 4933436H12Rik-201ENSMUST00000207304 658 ntTSL 5 BASIC13.62□□□□□ -0.23
Ccdc188F6WEU2 Acsm5-207ENSMUST00000207813 1084 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Ccdc188F6WEU2 Gm7207-201ENSMUST00000211575 1067 ntBASIC13.62□□□□□ -0.23
Ccdc188F6WEU2 AC113031.8-201ENSMUST00000227856 631 ntBASIC13.62□□□□□ -0.23
Ccdc188F6WEU2 Majin-201ENSMUST00000025699 1239 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Ccdc188F6WEU2 S100a8-201ENSMUST00000069927 486 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Ccdc188F6WEU2 Clec4b2-201ENSMUST00000088455 1174 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Ccdc188F6WEU2 Itgb4-201ENSMUST00000021107 6014 ntAPPRIS P2 TSL 5 BASIC13.62□□□□□ -0.23
Ccdc188F6WEU2 Adck5-214ENSMUST00000162503 2040 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
Ccdc188F6WEU2 Spon1-202ENSMUST00000084696 5201 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Ccdc188F6WEU2 Mrpl58-203ENSMUST00000106539 2522 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Ccdc188F6WEU2 Atg4d-201ENSMUST00000065005 5951 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Ccdc188F6WEU2 Aaed1-207ENSMUST00000222570 3011 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Ccdc188F6WEU2 Yes1-205ENSMUST00000202543 2657 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Ccdc188F6WEU2 Vav1-204ENSMUST00000169220 2810 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Ccdc188F6WEU2 4930438A08Rik-201ENSMUST00000108834 2093 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
Ccdc188F6WEU2 Rnf168-203ENSMUST00000171474 4460 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Ccdc188F6WEU2 Rab30-202ENSMUST00000107179 1304 ntTSL 5 BASIC13.62□□□□□ -0.23
Ccdc188F6WEU2 Rubcn-201ENSMUST00000040986 5257 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
Ccdc188F6WEU2 Zic3-202ENSMUST00000088629 1951 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Ccdc188F6WEU2 Pgbd5-203ENSMUST00000136892 1739 ntAPPRIS P2 TSL 5 BASIC13.61□□□□□ -0.23
Ccdc188F6WEU2 Dtwd2-203ENSMUST00000163590 2857 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Ccdc188F6WEU2 Efcab14-202ENSMUST00000106522 2636 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Ccdc188F6WEU2 Ccnc-204ENSMUST00000120679 1453 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Ccdc188F6WEU2 Msl1-201ENSMUST00000037915 4593 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Ccdc188F6WEU2 Gm10097-201ENSMUST00000180100 2784 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
Ccdc188F6WEU2 Mmp21-201ENSMUST00000033278 1858 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Ccdc188F6WEU2 Pcsk4-201ENSMUST00000020340 2539 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Ccdc188F6WEU2 Irs2-201ENSMUST00000040514 6323 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Ccdc188F6WEU2 Insig1-201ENSMUST00000059155 2697 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Ccdc188F6WEU2 Gm38049-201ENSMUST00000195698 1372 ntBASIC13.61□□□□□ -0.23
Ccdc188F6WEU2 Cdyl2-201ENSMUST00000109102 2411 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Ccdc188F6WEU2 AC126444.1-201ENSMUST00000225938 1768 ntBASIC13.61□□□□□ -0.23
Ccdc188F6WEU2 Agap1-202ENSMUST00000074945 10069 ntTSL 5 BASIC13.61□□□□□ -0.23
Ccdc188F6WEU2 Nlrx1-203ENSMUST00000169651 3621 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Ccdc188F6WEU2 Tmtc4-204ENSMUST00000126867 2952 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
Ccdc188F6WEU2 Tbc1d20-201ENSMUST00000028963 3386 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Ccdc188F6WEU2 Gm13425-201ENSMUST00000145389 5391 ntTSL 3 BASIC13.61□□□□□ -0.23
Ccdc188F6WEU2 Fut7-202ENSMUST00000100320 2076 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Ccdc188F6WEU2 Hist1h3d-201ENSMUST00000105105 1249 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
Ccdc188F6WEU2 6030468B19Rik-201ENSMUST00000106331 1071 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Ccdc188F6WEU2 Yipf6-202ENSMUST00000113811 930 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Ccdc188F6WEU2 Gm6890-201ENSMUST00000114117 776 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
Ccdc188F6WEU2 Gm13045-201ENSMUST00000119019 712 ntBASIC13.61□□□□□ -0.23
Ccdc188F6WEU2 Gm14460-201ENSMUST00000121511 639 ntBASIC13.61□□□□□ -0.23
Ccdc188F6WEU2 Gm14396-201ENSMUST00000126966 548 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Ccdc188F6WEU2 Gm3671-201ENSMUST00000182463 1007 ntBASIC13.61□□□□□ -0.23
Ccdc188F6WEU2 Mir124-2hg-207ENSMUST00000189868 535 ntTSL 2 BASIC13.61□□□□□ -0.23
Ccdc188F6WEU2 Gm44651-201ENSMUST00000207343 372 ntBASIC13.61□□□□□ -0.23
Ccdc188F6WEU2 Olfr707-202ENSMUST00000208759 1242 ntAPPRIS P1 TSL 3 BASIC13.61□□□□□ -0.23
Ccdc188F6WEU2 Calml4-207ENSMUST00000215968 526 ntTSL 2 BASIC13.61□□□□□ -0.23
Ccdc188F6WEU2 Gm18730-201ENSMUST00000218038 343 ntBASIC13.61□□□□□ -0.23
Ccdc188F6WEU2 Pym1-203ENSMUST00000218218 1143 ntTSL 3 BASIC13.61□□□□□ -0.23
Ccdc188F6WEU2 Rpl17-ps3-201ENSMUST00000221295 556 ntBASIC13.61□□□□□ -0.23
Ccdc188F6WEU2 AC169036.1-201ENSMUST00000227994 296 ntBASIC13.61□□□□□ -0.23
Ccdc188F6WEU2 Tex30-201ENSMUST00000027215 1272 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Ccdc188F6WEU2 Syngr4-201ENSMUST00000039049 967 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Ccdc188F6WEU2 Cthrc1-201ENSMUST00000067072 1166 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 33.6 ms