Protein–RNA interactions for Protein: B1AR17

Chd3, Chromodomain helicase DNA-binding protein 3, mousemouse

Predictions only

Length 2,055 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd3B1AR17 Entpd2-201ENSMUST00000028328 1935 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Chd3B1AR17 Lsr-202ENSMUST00000098553 1930 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Chd3B1AR17 Mcmbp-201ENSMUST00000057557 4237 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Chd3B1AR17 Zfp672-204ENSMUST00000108829 3094 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Chd3B1AR17 Arfgap1-203ENSMUST00000108860 2326 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Chd3B1AR17 Rhbdd3-203ENSMUST00000109878 1611 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Chd3B1AR17 E130317F20Rik-202ENSMUST00000217802 3420 ntBASIC13.31□□□□□ -0.28
Chd3B1AR17 Brinp1-201ENSMUST00000030036 3212 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Chd3B1AR17 Gm43738-201ENSMUST00000200659 2635 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
Chd3B1AR17 Lime1-201ENSMUST00000048077 1959 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Chd3B1AR17 Noct-201ENSMUST00000023849 3059 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Chd3B1AR17 Ano7-201ENSMUST00000058682 2963 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Chd3B1AR17 Gm16029-201ENSMUST00000161643 2427 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Chd3B1AR17 Gm12203-201ENSMUST00000118235 598 ntBASIC13.3□□□□□ -0.28
Chd3B1AR17 Gm12209-201ENSMUST00000120089 596 ntBASIC13.3□□□□□ -0.28
Chd3B1AR17 Pax5-206ENSMUST00000134968 969 ntTSL 5 BASIC13.3□□□□□ -0.28
Chd3B1AR17 Bik-201ENSMUST00000016902 943 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Chd3B1AR17 Gm8810-201ENSMUST00000172895 754 ntBASIC13.3□□□□□ -0.28
Chd3B1AR17 Cryaa-201ENSMUST00000019192 1176 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Chd3B1AR17 Gm38144-201ENSMUST00000192790 465 ntBASIC13.3□□□□□ -0.28
Chd3B1AR17 Gm42929-201ENSMUST00000198374 1286 ntBASIC13.3□□□□□ -0.28
Chd3B1AR17 Gm9728-201ENSMUST00000200197 1055 ntBASIC13.3□□□□□ -0.28
Chd3B1AR17 Ceacam10-201ENSMUST00000038069 1048 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Chd3B1AR17 Gm26604-201ENSMUST00000180926 1766 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Chd3B1AR17 Mpi-201ENSMUST00000034856 1780 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Chd3B1AR17 Gad1-205ENSMUST00000130998 1705 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Chd3B1AR17 Gng4-201ENSMUST00000021734 3179 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Chd3B1AR17 Egr2-203ENSMUST00000127820 2665 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
Chd3B1AR17 Rpn1-201ENSMUST00000032143 3633 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Chd3B1AR17 Cacna2d1-205ENSMUST00000167946 7436 ntAPPRIS ALT1 TSL 5 BASIC13.3□□□□□ -0.28
Chd3B1AR17 Cln3-203ENSMUST00000098036 1571 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Chd3B1AR17 Safb2-201ENSMUST00000075510 3277 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Chd3B1AR17 Oprm1-214ENSMUST00000105605 1503 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Chd3B1AR17 Oprm1-201ENSMUST00000000783 1500 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Chd3B1AR17 Eif4g1-202ENSMUST00000073840 5394 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
Chd3B1AR17 Apol6-206ENSMUST00000149569 2315 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Chd3B1AR17 Slit1-203ENSMUST00000169141 5673 ntTSL 5 BASIC13.3□□□□□ -0.28
Chd3B1AR17 Col11a2-201ENSMUST00000087497 6048 ntAPPRIS P2 TSL 2 BASIC13.3□□□□□ -0.28
Chd3B1AR17 Rnf103-203ENSMUST00000114179 2671 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
Chd3B1AR17 Canx-205ENSMUST00000179865 4281 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Chd3B1AR17 Endod1-201ENSMUST00000167549 4470 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Chd3B1AR17 1810058I24Rik-203ENSMUST00000152147 2521 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Chd3B1AR17 5033426O07Rik-202ENSMUST00000212635 2110 ntTSL 5 BASIC13.3□□□□□ -0.28
Chd3B1AR17 Psph-201ENSMUST00000031399 1733 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Chd3B1AR17 Pde3a-201ENSMUST00000043259 12302 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Chd3B1AR17 Ppp1r18-205ENSMUST00000187690 3185 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Chd3B1AR17 Gm8062-201ENSMUST00000139696 444 ntBASIC13.3□□□□□ -0.28
Chd3B1AR17 Gm5741-201ENSMUST00000177563 328 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Chd3B1AR17 1700080E11Rik-202ENSMUST00000190661 682 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Chd3B1AR17 Rab39-201ENSMUST00000068449 2971 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Chd3B1AR17 4930556M19Rik-201ENSMUST00000180604 2468 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Chd3B1AR17 Rbbp5-206ENSMUST00000190825 2456 ntAPPRIS ALT1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Chd3B1AR17 Ap4b1-201ENSMUST00000047285 2799 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Chd3B1AR17 Tmem9b-202ENSMUST00000118571 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Chd3B1AR17 Ankrd44-210ENSMUST00000179030 6140 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Chd3B1AR17 Ccdc155-201ENSMUST00000121017 2262 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Chd3B1AR17 Gm26878-201ENSMUST00000181778 1644 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Chd3B1AR17 Ctgf-203ENSMUST00000176228 2490 ntTSL 2 BASIC13.29□□□□□ -0.28
Chd3B1AR17 Orai2-201ENSMUST00000041048 3908 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Chd3B1AR17 4833439L19Rik-201ENSMUST00000026989 2727 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Chd3B1AR17 Gm17705-201ENSMUST00000172285 1555 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Chd3B1AR17 Gm15317-201ENSMUST00000129569 699 ntTSL 3 BASIC13.29□□□□□ -0.28
Chd3B1AR17 Gm28380-201ENSMUST00000188800 385 ntTSL 5 BASIC13.29□□□□□ -0.28
Chd3B1AR17 Ube2a-205ENSMUST00000201068 1298 ntTSL 5 BASIC13.29□□□□□ -0.28
Chd3B1AR17 Jakmip1-215ENSMUST00000212047 1191 ntTSL 5 BASIC13.29□□□□□ -0.28
Chd3B1AR17 Chd3os-203ENSMUST00000218008 1026 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Chd3B1AR17 Tmem86b-201ENSMUST00000055085 1222 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Chd3B1AR17 Rn7sk-201ENSMUST00000083103 331 ntBASIC13.29□□□□□ -0.28
Chd3B1AR17 Gm26315-201ENSMUST00000083890 321 ntBASIC13.29□□□□□ -0.28
Chd3B1AR17 Synj2-210ENSMUST00000115791 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Chd3B1AR17 Yif1a-201ENSMUST00000025811 1493 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Chd3B1AR17 Gm12462-201ENSMUST00000140826 3056 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Chd3B1AR17 Lin54-208ENSMUST00000149714 3869 ntTSL 5 BASIC13.29□□□□□ -0.28
Chd3B1AR17 Prkacb-202ENSMUST00000102515 4347 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Chd3B1AR17 Slc43a1-203ENSMUST00000111625 2487 ntAPPRIS P4 TSL 1 (best) BASIC13.29□□□□□ -0.28
Chd3B1AR17 Os9-201ENSMUST00000080975 2458 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
Chd3B1AR17 Gm10339-203ENSMUST00000225409 1671 ntBASIC13.29□□□□□ -0.28
Chd3B1AR17 Osbpl10-204ENSMUST00000182384 2158 ntTSL 5 BASIC13.29□□□□□ -0.28
Chd3B1AR17 Cdh7-206ENSMUST00000137092 2681 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Chd3B1AR17 Cct3-ps1-201ENSMUST00000118023 1647 ntBASIC13.29□□□□□ -0.28
Chd3B1AR17 Gm16244-201ENSMUST00000159313 2327 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Chd3B1AR17 G3bp2-203ENSMUST00000167918 4232 ntAPPRIS ALT1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Chd3B1AR17 Mapk8ip2-201ENSMUST00000023291 5558 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Chd3B1AR17 Gm13886-201ENSMUST00000117876 1183 ntBASIC13.28□□□□□ -0.28
Chd3B1AR17 Gm15444-201ENSMUST00000148335 388 ntTSL 5 BASIC13.28□□□□□ -0.28
Chd3B1AR17 Atpif1-203ENSMUST00000152993 462 ntTSL 2 BASIC13.28□□□□□ -0.28
Chd3B1AR17 Snhg9-201ENSMUST00000161706 183 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Chd3B1AR17 Glo1-202ENSMUST00000167624 895 ntAPPRIS P1 TSL 2 BASIC13.28□□□□□ -0.28
Chd3B1AR17 Gm29417-201ENSMUST00000188160 571 ntTSL 5 BASIC13.28□□□□□ -0.28
Chd3B1AR17 Neurl3-202ENSMUST00000188666 1206 ntTSL 5 BASIC13.28□□□□□ -0.28
Chd3B1AR17 Gm44756-201ENSMUST00000206172 1069 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Chd3B1AR17 Rpl18-208ENSMUST00000211061 552 ntTSL 5 BASIC13.28□□□□□ -0.28
Chd3B1AR17 Nfat5-211ENSMUST00000151114 4982 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
Chd3B1AR17 P4ha1-202ENSMUST00000092512 2387 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Chd3B1AR17 Emilin2-201ENSMUST00000024849 3910 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Chd3B1AR17 Dnmt3l-208ENSMUST00000151242 1657 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Chd3B1AR17 Wnt3a-201ENSMUST00000010044 2761 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Chd3B1AR17 Gata2-201ENSMUST00000015197 3571 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Chd3B1AR17 Atg16l1-201ENSMUST00000027512 3130 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
Chd3B1AR17 Gm9200-201ENSMUST00000118513 1354 ntBASIC13.28□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 30.8 ms