Protein–RNA interactions for Protein: A0A075B652

Trav5-4, T cell receptor alpha variable 5-4 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav5-4A0A075B652 1700037C18Rik-202ENSMUST00000115859 2592 ntAPPRIS P2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trav5-4A0A075B652 Kyat1-205ENSMUST00000113662 1850 ntAPPRIS P1 TSL 5 BASIC11.44□□□□□ -0.58
Trav5-4A0A075B652 Twf2-204ENSMUST00000188650 1508 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Trav5-4A0A075B652 Alkbh3os1-201ENSMUST00000028621 1549 ntTSL 5 BASIC11.44□□□□□ -0.58
Trav5-4A0A075B652 Tfap2a-202ENSMUST00000110193 2863 ntAPPRIS P3 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trav5-4A0A075B652 Pik3cd-205ENSMUST00000118704 4894 ntAPPRIS ALT1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trav5-4A0A075B652 Nub1-202ENSMUST00000197407 3546 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trav5-4A0A075B652 Serpinh1-205ENSMUST00000208119 2173 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trav5-4A0A075B652 Opn4-201ENSMUST00000022331 2156 ntAPPRIS P3 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trav5-4A0A075B652 Polg-201ENSMUST00000073889 7837 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trav5-4A0A075B652 Zfp142-203ENSMUST00000113737 7473 ntAPPRIS P3 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trav5-4A0A075B652 Gm45053-201ENSMUST00000206112 2499 ntBASIC11.44□□□□□ -0.58
Trav5-4A0A075B652 Sept1-202ENSMUST00000106314 1486 ntAPPRIS P2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trav5-4A0A075B652 Engase-202ENSMUST00000135383 4064 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trav5-4A0A075B652 Lzts1-204ENSMUST00000185176 5019 ntAPPRIS P1 TSL 5 BASIC11.44□□□□□ -0.58
Trav5-4A0A075B652 Celf5-201ENSMUST00000118763 4391 ntAPPRIS P3 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trav5-4A0A075B652 Ptbp2-201ENSMUST00000029780 3364 ntAPPRIS P3 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trav5-4A0A075B652 Bend3-201ENSMUST00000040147 5882 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Trav5-4A0A075B652 Fbxo44-205ENSMUST00000151127 1403 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Trav5-4A0A075B652 Tnpo2-202ENSMUST00000166592 4884 ntAPPRIS P1 TSL 5 BASIC11.43□□□□□ -0.58
Trav5-4A0A075B652 Kcnn1-204ENSMUST00000212086 2964 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Trav5-4A0A075B652 2900005J15Rik-202ENSMUST00000171190 2025 ntBASIC11.43□□□□□ -0.58
Trav5-4A0A075B652 Ccdc134-201ENSMUST00000089174 2043 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Trav5-4A0A075B652 Lzts3-202ENSMUST00000089561 4169 ntAPPRIS P3 TSL 5 BASIC11.43□□□□□ -0.58
Trav5-4A0A075B652 Nt5c3b-201ENSMUST00000092688 1399 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Trav5-4A0A075B652 B230319C09Rik-201ENSMUST00000063376 1689 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Trav5-4A0A075B652 Btnl2-202ENSMUST00000178562 2563 ntAPPRIS ALT2 TSL 5 BASIC11.43□□□□□ -0.58
Trav5-4A0A075B652 Btnl2-201ENSMUST00000025198 2564 ntAPPRIS P2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Trav5-4A0A075B652 Tmem163-205ENSMUST00000185560 3488 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Trav5-4A0A075B652 Epb41l2-201ENSMUST00000053748 4385 ntAPPRIS P2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Trav5-4A0A075B652 Duox1-201ENSMUST00000099461 5267 ntAPPRIS P1 TSL 2 BASIC11.43□□□□□ -0.58
Trav5-4A0A075B652 Armcx1-206ENSMUST00000113201 2228 ntAPPRIS P1 TSL 2 BASIC11.43□□□□□ -0.58
Trav5-4A0A075B652 Gm2420-202ENSMUST00000202224 2249 ntBASIC11.43□□□□□ -0.58
Trav5-4A0A075B652 D430019H16Rik-201ENSMUST00000178224 5786 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Trav5-4A0A075B652 Myh14-203ENSMUST00000107900 6400 ntAPPRIS ALT2 TSL 5 BASIC11.43□□□□□ -0.58
Trav5-4A0A075B652 Dusp14-203ENSMUST00000108101 1082 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Trav5-4A0A075B652 Dnajc5-202ENSMUST00000108796 934 ntAPPRIS P1 TSL 5 BASIC11.43□□□□□ -0.58
Trav5-4A0A075B652 Acvr1c-203ENSMUST00000112607 1266 ntTSL 5 BASIC11.43□□□□□ -0.58
Trav5-4A0A075B652 Rbmx-202ENSMUST00000114726 2108 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Trav5-4A0A075B652 Gm6415-201ENSMUST00000118488 348 ntBASIC11.43□□□□□ -0.58
Trav5-4A0A075B652 Crybb3-204ENSMUST00000119627 828 ntAPPRIS P1 TSL 2 BASIC11.43□□□□□ -0.58
Trav5-4A0A075B652 Snhg17-201ENSMUST00000133449 933 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Trav5-4A0A075B652 Haghl-206ENSMUST00000138759 1074 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Trav5-4A0A075B652 Rpl27a-203ENSMUST00000143107 1158 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Trav5-4A0A075B652 Gm3809-201ENSMUST00000180973 1006 ntBASIC11.43□□□□□ -0.58
Trav5-4A0A075B652 Gm2445-201ENSMUST00000182798 989 ntBASIC11.43□□□□□ -0.58
Trav5-4A0A075B652 Gm27702-201ENSMUST00000184512 56 ntBASIC11.43□□□□□ -0.58
Trav5-4A0A075B652 Gm29741-201ENSMUST00000192667 421 ntBASIC11.43□□□□□ -0.58
Trav5-4A0A075B652 Gm37714-201ENSMUST00000194742 342 ntBASIC11.43□□□□□ -0.58
Trav5-4A0A075B652 Gm42854-201ENSMUST00000201262 722 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Trav5-4A0A075B652 Gm5312-201ENSMUST00000203728 547 ntBASIC11.43□□□□□ -0.58
Trav5-4A0A075B652 Gm6916-202ENSMUST00000205523 195 ntBASIC11.43□□□□□ -0.58
Trav5-4A0A075B652 Gm30684-201ENSMUST00000205632 600 ntTSL 3 BASIC11.43□□□□□ -0.58
Trav5-4A0A075B652 Gm16476-201ENSMUST00000221544 139 ntBASIC11.43□□□□□ -0.58
Trav5-4A0A075B652 AC140397.2-201ENSMUST00000224213 834 ntBASIC11.43□□□□□ -0.58
Trav5-4A0A075B652 Tnp2-201ENSMUST00000051297 549 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Trav5-4A0A075B652 Cox6b1-201ENSMUST00000075738 618 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Trav5-4A0A075B652 Tdg-208ENSMUST00000151390 3502 ntAPPRIS P3 TSL 1 (best) BASIC11.43□□□□□ -0.58
Trav5-4A0A075B652 Clcn3-204ENSMUST00000110301 4099 ntAPPRIS ALT1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Trav5-4A0A075B652 Ccdc121-201ENSMUST00000058825 1819 ntAPPRIS P1 BASIC11.43□□□□□ -0.58
Trav5-4A0A075B652 Map2k6-202ENSMUST00000100260 2088 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Trav5-4A0A075B652 Ralgds-202ENSMUST00000100241 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Trav5-4A0A075B652 Ap2a1-204ENSMUST00000167930 3376 ntTSL 5 BASIC11.43□□□□□ -0.58
Trav5-4A0A075B652 Duxf3-202ENSMUST00000176875 2025 ntAPPRIS P1 BASIC11.43□□□□□ -0.58
Trav5-4A0A075B652 AC155298.2-201ENSMUST00000225485 6226 ntBASIC11.43□□□□□ -0.58
Trav5-4A0A075B652 Tlk2-209ENSMUST00000145048 2776 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Trav5-4A0A075B652 Unc5d-201ENSMUST00000168630 9220 ntAPPRIS P3 TSL 1 (best) BASIC11.43□□□□□ -0.58
Trav5-4A0A075B652 Btrc-201ENSMUST00000065601 2978 ntAPPRIS P3 TSL 1 (best) BASIC11.43□□□□□ -0.58
Trav5-4A0A075B652 Colgalt1-201ENSMUST00000047903 3207 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Trav5-4A0A075B652 Zfp467-204ENSMUST00000114559 3163 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Trav5-4A0A075B652 Etl4-201ENSMUST00000045555 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Trav5-4A0A075B652 C530008M17Rik-204ENSMUST00000121160 6921 ntAPPRIS ALT2 TSL 5 BASIC11.42□□□□□ -0.58
Trav5-4A0A075B652 Zfp385b-203ENSMUST00000111830 2642 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Trav5-4A0A075B652 Anp32e-201ENSMUST00000015893 1381 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Trav5-4A0A075B652 Eya4-206ENSMUST00000219315 3100 ntAPPRIS ALT2 TSL 5 BASIC11.42□□□□□ -0.58
Trav5-4A0A075B652 Nat8f6-202ENSMUST00000174143 1571 ntAPPRIS P1 TSL 3 BASIC11.42□□□□□ -0.58
Trav5-4A0A075B652 Ntrk2-204ENSMUST00000224259 3049 ntBASIC11.42□□□□□ -0.58
Trav5-4A0A075B652 Zfp385c-201ENSMUST00000103119 2766 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Trav5-4A0A075B652 Stk32b-201ENSMUST00000094836 3458 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Trav5-4A0A075B652 Mir449b-201ENSMUST00000104833 80 ntBASIC11.42□□□□□ -0.58
Trav5-4A0A075B652 Metrnl-202ENSMUST00000106089 1101 ntAPPRIS ALT2 TSL 5 BASIC11.42□□□□□ -0.58
Trav5-4A0A075B652 Tmsb4x-202ENSMUST00000112175 864 ntTSL 2 BASIC11.42□□□□□ -0.58
Trav5-4A0A075B652 Wdr38-202ENSMUST00000112872 1194 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Trav5-4A0A075B652 Gm15199-201ENSMUST00000129933 542 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Trav5-4A0A075B652 1810032O08Rik-206ENSMUST00000144049 966 ntAPPRIS P5 TSL 2 BASIC11.42□□□□□ -0.58
Trav5-4A0A075B652 Runx2os2-201ENSMUST00000161664 818 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Trav5-4A0A075B652 Naxd-205ENSMUST00000178721 1108 ntTSL 5 BASIC11.42□□□□□ -0.58
Trav5-4A0A075B652 Gm10605-201ENSMUST00000182342 665 ntTSL 3 BASIC11.42□□□□□ -0.58
Trav5-4A0A075B652 Lmo4-207ENSMUST00000196264 1263 ntTSL 5 BASIC11.42□□□□□ -0.58
Trav5-4A0A075B652 Gm44662-201ENSMUST00000206970 412 ntTSL 5 BASIC11.42□□□□□ -0.58
Trav5-4A0A075B652 Alkbh7-201ENSMUST00000002737 917 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Trav5-4A0A075B652 Atp6v0b-201ENSMUST00000036380 1000 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Trav5-4A0A075B652 Rnf113a1-201ENSMUST00000046433 1223 ntAPPRIS P1 BASIC11.42□□□□□ -0.58
Trav5-4A0A075B652 Klk5-201ENSMUST00000048444 1239 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Trav5-4A0A075B652 Klk1-201ENSMUST00000075162 954 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Trav5-4A0A075B652 H2-K1-202ENSMUST00000087189 579 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Trav5-4A0A075B652 Rccd1-201ENSMUST00000047362 3336 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Trav5-4A0A075B652 Hnrnpa1-201ENSMUST00000036004 1918 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Trav5-4A0A075B652 Plekhg2-203ENSMUST00000121085 4649 ntAPPRIS ALT2 TSL 2 BASIC11.42□□□□□ -0.58
Trav5-4A0A075B652 Prrc2b-201ENSMUST00000036691 8612 ntAPPRIS P3 TSL 1 (best) BASIC11.42□□□□□ -0.58
Retrieved 100 of 76,532 protein–RNA pairs in 36.2 ms