Protein–RNA interactions for Protein: Q9Z0M3

Cdh20, Cadherin-20, mousemouse

Predictions only

Length 801 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh20Q9Z0M3 Aspdh-201ENSMUST00000035929 1017 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Cdh20Q9Z0M3 Tgif2-ps2-201ENSMUST00000061746 711 ntBASIC12.63□□□□□ -0.39
Cdh20Q9Z0M3 Sema6c-202ENSMUST00000090823 4029 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Cdh20Q9Z0M3 Ptbp2-201ENSMUST00000029780 3364 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
Cdh20Q9Z0M3 Tmem163-205ENSMUST00000185560 3488 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Cdh20Q9Z0M3 Rnf114-201ENSMUST00000078050 2502 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Cdh20Q9Z0M3 Axdnd1-204ENSMUST00000178036 3586 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
Cdh20Q9Z0M3 Psd2-206ENSMUST00000177432 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Cdh20Q9Z0M3 2310022A10Rik-204ENSMUST00000187032 1871 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Cdh20Q9Z0M3 9030612E09Rik-201ENSMUST00000053792 1859 ntAPPRIS P1 BASIC12.63□□□□□ -0.39
Cdh20Q9Z0M3 Prrg3-203ENSMUST00000170096 3408 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Cdh20Q9Z0M3 Sbno2-209ENSMUST00000219260 4850 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
Cdh20Q9Z0M3 Casp7-201ENSMUST00000026062 2350 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Cdh20Q9Z0M3 March8-213ENSMUST00000203193 4245 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Cdh20Q9Z0M3 Kcnk13-202ENSMUST00000160413 3061 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Cdh20Q9Z0M3 Slc45a1-201ENSMUST00000037827 3387 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Cdh20Q9Z0M3 AC158633.2-201ENSMUST00000222959 6046 ntTSL 5 BASIC12.63□□□□□ -0.39
Cdh20Q9Z0M3 Stk33-203ENSMUST00000121378 1304 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Cdh20Q9Z0M3 4930423C22Rik-201ENSMUST00000193863 1311 ntBASIC12.62□□□□□ -0.39
Cdh20Q9Z0M3 Gm13859-201ENSMUST00000119936 1423 ntBASIC12.62□□□□□ -0.39
Cdh20Q9Z0M3 Rtp3-201ENSMUST00000084922 1425 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
Cdh20Q9Z0M3 Ube3b-201ENSMUST00000074002 5194 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Cdh20Q9Z0M3 Gm35721-201ENSMUST00000220294 2014 ntTSL 5 BASIC12.62□□□□□ -0.39
Cdh20Q9Z0M3 Shmt2-206ENSMUST00000219239 2238 ntAPPRIS ALT1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Cdh20Q9Z0M3 CT030684.3-201ENSMUST00000227308 2445 ntBASIC12.62□□□□□ -0.39
Cdh20Q9Z0M3 1810058I24Rik-203ENSMUST00000152147 2521 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Cdh20Q9Z0M3 1700065D16Rik-205ENSMUST00000190890 2903 ntBASIC12.62□□□□□ -0.39
Cdh20Q9Z0M3 Opa1-201ENSMUST00000038867 3230 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Cdh20Q9Z0M3 Gtpbp1-201ENSMUST00000046463 3398 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Cdh20Q9Z0M3 Slc25a22-202ENSMUST00000106006 2277 ntTSL 5 BASIC12.62□□□□□ -0.39
Cdh20Q9Z0M3 Ehbp1l1-201ENSMUST00000049295 6404 ntAPPRIS P4 TSL 1 (best) BASIC12.62□□□□□ -0.39
Cdh20Q9Z0M3 Myh7-201ENSMUST00000102803 6135 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Cdh20Q9Z0M3 Il11ra1-203ENSMUST00000108041 1953 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Cdh20Q9Z0M3 Gm13305-201ENSMUST00000098121 1953 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Cdh20Q9Z0M3 Lrrc34-201ENSMUST00000029252 1891 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Cdh20Q9Z0M3 Ypel3-203ENSMUST00000106357 1594 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Cdh20Q9Z0M3 Lcn6-202ENSMUST00000114197 635 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Cdh20Q9Z0M3 Gm15240-201ENSMUST00000118156 720 ntBASIC12.62□□□□□ -0.39
Cdh20Q9Z0M3 Haghl-203ENSMUST00000133071 1128 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Cdh20Q9Z0M3 Fbxw4-209ENSMUST00000162433 789 ntTSL 3 BASIC12.62□□□□□ -0.39
Cdh20Q9Z0M3 Gm26830-201ENSMUST00000180389 993 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Cdh20Q9Z0M3 Gm43691-201ENSMUST00000196625 697 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Cdh20Q9Z0M3 Efcab10-201ENSMUST00000020878 673 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Cdh20Q9Z0M3 Clps-201ENSMUST00000025062 550 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Cdh20Q9Z0M3 Car5a-201ENSMUST00000057653 1249 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Cdh20Q9Z0M3 Gm11937-201ENSMUST00000076478 396 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
Cdh20Q9Z0M3 Rnf151-201ENSMUST00000008626 1189 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Cdh20Q9Z0M3 Nt5c2-202ENSMUST00000168536 3769 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Cdh20Q9Z0M3 Zfp444-204ENSMUST00000108567 5104 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Cdh20Q9Z0M3 Ablim2-201ENSMUST00000054598 3564 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
Cdh20Q9Z0M3 Smg5-201ENSMUST00000001451 4448 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Cdh20Q9Z0M3 Rtl6-201ENSMUST00000069476 4426 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
Cdh20Q9Z0M3 Mmp2-201ENSMUST00000034187 3078 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Cdh20Q9Z0M3 Gm42690-201ENSMUST00000197921 1836 ntBASIC12.62□□□□□ -0.39
Cdh20Q9Z0M3 Gm2115-201ENSMUST00000180387 7055 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Cdh20Q9Z0M3 Gm4297-201ENSMUST00000119285 2579 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
Cdh20Q9Z0M3 Gm37691-201ENSMUST00000192147 2573 ntBASIC12.62□□□□□ -0.39
Cdh20Q9Z0M3 Kif1c-204ENSMUST00000137119 6596 ntAPPRIS P2 TSL 5 BASIC12.62□□□□□ -0.39
Cdh20Q9Z0M3 Prss23-201ENSMUST00000041761 3228 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Cdh20Q9Z0M3 AC154262.2-201ENSMUST00000224310 2293 ntBASIC12.62□□□□□ -0.39
Cdh20Q9Z0M3 Golim4-208ENSMUST00000167078 2902 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
Cdh20Q9Z0M3 Stpg2-202ENSMUST00000106239 2055 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
Cdh20Q9Z0M3 Bag6-203ENSMUST00000172571 3599 ntTSL 5 BASIC12.61□□□□□ -0.39
Cdh20Q9Z0M3 Wbp11-201ENSMUST00000116514 2739 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Cdh20Q9Z0M3 Cacna2d1-202ENSMUST00000078272 7311 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Cdh20Q9Z0M3 Nptn-206ENSMUST00000176557 1898 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Cdh20Q9Z0M3 Rbm42-201ENSMUST00000042726 1784 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Cdh20Q9Z0M3 Myh3-203ENSMUST00000165221 5994 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
Cdh20Q9Z0M3 A530083I20Rik-201ENSMUST00000180486 2421 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Cdh20Q9Z0M3 Lysmd4-201ENSMUST00000058771 2898 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Cdh20Q9Z0M3 Ldha-202ENSMUST00000048209 1588 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Cdh20Q9Z0M3 Clcn3-204ENSMUST00000110301 4099 ntAPPRIS ALT1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Cdh20Q9Z0M3 Pam-201ENSMUST00000058762 4095 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Cdh20Q9Z0M3 Prrt3-202ENSMUST00000204134 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Cdh20Q9Z0M3 Tnpo2-201ENSMUST00000093360 4863 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Cdh20Q9Z0M3 4933434M16Rik-202ENSMUST00000153429 1940 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Cdh20Q9Z0M3 Ntan1-202ENSMUST00000115805 984 ntTSL 3 BASIC12.61□□□□□ -0.39
Cdh20Q9Z0M3 Hagh-202ENSMUST00000118788 1191 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
Cdh20Q9Z0M3 Lamtor2-202ENSMUST00000119002 568 ntTSL 2 BASIC12.61□□□□□ -0.39
Cdh20Q9Z0M3 Ncr3-ps-201ENSMUST00000134687 525 ntBASIC12.61□□□□□ -0.39
Cdh20Q9Z0M3 Ube2i-205ENSMUST00000172587 508 ntTSL 2 BASIC12.61□□□□□ -0.39
Cdh20Q9Z0M3 2310001H17Rik-206ENSMUST00000205051 676 ntTSL 3 BASIC12.61□□□□□ -0.39
Cdh20Q9Z0M3 2900055J20Rik-201ENSMUST00000096572 723 ntAPPRIS P1 BASIC12.61□□□□□ -0.39
Cdh20Q9Z0M3 Slc7a7-206ENSMUST00000197440 2278 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Cdh20Q9Z0M3 Tcirg1-211ENSMUST00000145791 2729 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Cdh20Q9Z0M3 Gm26525-201ENSMUST00000180666 3616 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Cdh20Q9Z0M3 Gm26867-201ENSMUST00000180963 3615 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Cdh20Q9Z0M3 Gm14452-201ENSMUST00000118680 1632 ntBASIC12.61□□□□□ -0.39
Cdh20Q9Z0M3 Bmp4-201ENSMUST00000074077 2064 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Cdh20Q9Z0M3 Dnajb1-201ENSMUST00000005620 2996 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Cdh20Q9Z0M3 Psmd2-201ENSMUST00000007212 2961 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Cdh20Q9Z0M3 Psmd8-207ENSMUST00000209034 1983 ntTSL 2 BASIC12.61□□□□□ -0.39
Cdh20Q9Z0M3 Nkain3-202ENSMUST00000119374 4567 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Cdh20Q9Z0M3 Trpc7-206ENSMUST00000173513 2241 ntTSL 5 BASIC12.61□□□□□ -0.39
Cdh20Q9Z0M3 Polr2a-202ENSMUST00000071213 5799 ntTSL 5 BASIC12.61□□□□□ -0.39
Cdh20Q9Z0M3 Myef2-207ENSMUST00000147105 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Cdh20Q9Z0M3 Sdha-201ENSMUST00000022062 2900 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Cdh20Q9Z0M3 Rbm47-206ENSMUST00000200775 3180 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
Cdh20Q9Z0M3 Ripk4-201ENSMUST00000019386 3541 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Cdh20Q9Z0M3 Tmem51os1-204ENSMUST00000153023 3440 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 40.1 ms