Protein–RNA interactions for Protein: Q9QWF0

Chaf1a, Chromatin assembly factor 1 subunit A, mousemouse

Predictions only

Length 911 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chaf1aQ9QWF0 Atp6ap1-201ENSMUST00000019231 2189 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Chaf1aQ9QWF0 Mbp-207ENSMUST00000114674 2108 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Chaf1aQ9QWF0 Serpinb2-201ENSMUST00000009356 1970 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Chaf1aQ9QWF0 Plekhb1-207ENSMUST00000116287 1911 ntAPPRIS ALT1 TSL 3 BASIC15.29■□□□□ 0.04
Chaf1aQ9QWF0 Irak2-202ENSMUST00000089022 2974 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Chaf1aQ9QWF0 Chrnd-202ENSMUST00000186373 2949 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Chaf1aQ9QWF0 Klk10-201ENSMUST00000014058 1373 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Chaf1aQ9QWF0 Nfatc2-204ENSMUST00000109184 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Chaf1aQ9QWF0 Mettl23-201ENSMUST00000106370 1276 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Chaf1aQ9QWF0 Dusp14-203ENSMUST00000108101 1082 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Chaf1aQ9QWF0 Gm9719-201ENSMUST00000162765 543 ntBASIC15.29■□□□□ 0.04
Chaf1aQ9QWF0 Dupd1-202ENSMUST00000224735 548 ntBASIC15.29■□□□□ 0.04
Chaf1aQ9QWF0 Rps10-201ENSMUST00000025052 519 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Chaf1aQ9QWF0 Bhmt-201ENSMUST00000099309 2490 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Chaf1aQ9QWF0 Actn4-211ENSMUST00000217157 3530 ntTSL 5 BASIC15.29■□□□□ 0.04
Chaf1aQ9QWF0 Mpp4-210ENSMUST00000191200 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Chaf1aQ9QWF0 Zkscan14-203ENSMUST00000198959 2243 ntBASIC15.29■□□□□ 0.04
Chaf1aQ9QWF0 Litaf-201ENSMUST00000023143 2235 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Chaf1aQ9QWF0 Dtnb-223ENSMUST00000174547 2112 ntTSL 5 BASIC15.29■□□□□ 0.04
Chaf1aQ9QWF0 Nkain3-201ENSMUST00000102998 3098 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Chaf1aQ9QWF0 Gnb5-202ENSMUST00000213990 1803 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Chaf1aQ9QWF0 Gorab-201ENSMUST00000045138 2538 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Chaf1aQ9QWF0 Krt36-201ENSMUST00000107416 1671 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
Chaf1aQ9QWF0 Ly9-202ENSMUST00000068878 2488 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
Chaf1aQ9QWF0 Nfe2-205ENSMUST00000133600 1605 ntTSL 5 BASIC15.28■□□□□ 0.04
Chaf1aQ9QWF0 Mpp4-201ENSMUST00000066374 2344 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
Chaf1aQ9QWF0 Mpp4-202ENSMUST00000078874 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Chaf1aQ9QWF0 Hmga2-203ENSMUST00000159699 3810 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Chaf1aQ9QWF0 Pbrm1-203ENSMUST00000052239 5065 ntAPPRIS ALT1 TSL 5 BASIC15.28■□□□□ 0.04
Chaf1aQ9QWF0 Tmprss9-203ENSMUST00000219817 3581 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
Chaf1aQ9QWF0 Ulk3-201ENSMUST00000053230 2826 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Chaf1aQ9QWF0 Dab2ip-205ENSMUST00000112986 5580 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
Chaf1aQ9QWF0 Cacng3-201ENSMUST00000084615 2777 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Chaf1aQ9QWF0 Psmc5-201ENSMUST00000021049 1316 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Chaf1aQ9QWF0 Gm25287-201ENSMUST00000103846 110 ntBASIC15.28■□□□□ 0.04
Chaf1aQ9QWF0 Gm22918-201ENSMUST00000103855 110 ntBASIC15.28■□□□□ 0.04
Chaf1aQ9QWF0 Zfp688-201ENSMUST00000106300 1015 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
Chaf1aQ9QWF0 Sept1-201ENSMUST00000106313 1285 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
Chaf1aQ9QWF0 Uqcrq-203ENSMUST00000109021 405 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Chaf1aQ9QWF0 Acyp1-203ENSMUST00000117138 735 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
Chaf1aQ9QWF0 Tex30-206ENSMUST00000133677 935 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Chaf1aQ9QWF0 Bcl2l2-204ENSMUST00000172844 498 ntTSL 5 BASIC15.28■□□□□ 0.04
Chaf1aQ9QWF0 Lmo4-207ENSMUST00000196264 1263 ntTSL 5 BASIC15.28■□□□□ 0.04
Chaf1aQ9QWF0 Gm5779-201ENSMUST00000218467 910 ntBASIC15.28■□□□□ 0.04
Chaf1aQ9QWF0 Gm18027-201ENSMUST00000218947 619 ntBASIC15.28■□□□□ 0.04
Chaf1aQ9QWF0 Gm36236-201ENSMUST00000220780 701 ntTSL 3 BASIC15.28■□□□□ 0.04
Chaf1aQ9QWF0 Pecr-202ENSMUST00000097698 932 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Chaf1aQ9QWF0 Ctsa-203ENSMUST00000103093 2534 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Chaf1aQ9QWF0 Sv2b-202ENSMUST00000165175 5524 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Chaf1aQ9QWF0 Engase-202ENSMUST00000135383 4064 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Chaf1aQ9QWF0 Cmip-201ENSMUST00000095172 2276 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Chaf1aQ9QWF0 Pfkfb3-212ENSMUST00000170196 2163 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Chaf1aQ9QWF0 Zfp296-201ENSMUST00000108453 1530 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Chaf1aQ9QWF0 Gm27198-201ENSMUST00000184172 1517 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Chaf1aQ9QWF0 Gm13848-201ENSMUST00000130777 2047 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Chaf1aQ9QWF0 Abi1-201ENSMUST00000078977 3027 ntAPPRIS ALT1 TSL 5 BASIC15.27■□□□□ 0.04
Chaf1aQ9QWF0 Map10-201ENSMUST00000053078 3542 ntAPPRIS P1 BASIC15.27■□□□□ 0.04
Chaf1aQ9QWF0 Ispd-205ENSMUST00000221895 4022 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Chaf1aQ9QWF0 Cacna1g-204ENSMUST00000107785 7523 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.04
Chaf1aQ9QWF0 Hk3-208ENSMUST00000153665 2945 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Chaf1aQ9QWF0 Gm14379-201ENSMUST00000128858 1878 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Chaf1aQ9QWF0 Rbm46-201ENSMUST00000048647 1794 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
Chaf1aQ9QWF0 Nudt18-201ENSMUST00000089049 3926 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Chaf1aQ9QWF0 Tigd2-201ENSMUST00000062626 3007 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Chaf1aQ9QWF0 Mff-201ENSMUST00000073025 1706 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Chaf1aQ9QWF0 H60b-201ENSMUST00000105522 1029 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Chaf1aQ9QWF0 Btf3-204ENSMUST00000134542 780 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.04
Chaf1aQ9QWF0 Ankrd13d-204ENSMUST00000167215 639 ntTSL 3 BASIC15.27■□□□□ 0.04
Chaf1aQ9QWF0 Gm27397-201ENSMUST00000184997 107 ntBASIC15.27■□□□□ 0.04
Chaf1aQ9QWF0 Gm28942-201ENSMUST00000186334 365 ntTSL 3 BASIC15.27■□□□□ 0.04
Chaf1aQ9QWF0 Gm40123-201ENSMUST00000198175 1027 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Chaf1aQ9QWF0 Fam71e1-204ENSMUST00000205422 366 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Chaf1aQ9QWF0 Uts2-201ENSMUST00000030803 538 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Chaf1aQ9QWF0 Selenow-201ENSMUST00000044355 736 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Chaf1aQ9QWF0 Lce3b-201ENSMUST00000046234 562 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Chaf1aQ9QWF0 C77080-203ENSMUST00000106051 5049 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
Chaf1aQ9QWF0 C77080-202ENSMUST00000097873 5033 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
Chaf1aQ9QWF0 Mks1-201ENSMUST00000038196 2499 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Chaf1aQ9QWF0 C130012C08Rik-201ENSMUST00000194287 3665 ntBASIC15.27■□□□□ 0.03
Chaf1aQ9QWF0 Slc35c2-202ENSMUST00000109298 1991 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Chaf1aQ9QWF0 C130080G10Rik-203ENSMUST00000154140 1564 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Chaf1aQ9QWF0 Hnrnpa1-201ENSMUST00000036004 1918 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Chaf1aQ9QWF0 Gm10728-201ENSMUST00000194292 1829 ntBASIC15.27■□□□□ 0.03
Chaf1aQ9QWF0 Usf1-208ENSMUST00000161241 2167 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Chaf1aQ9QWF0 Zscan29-205ENSMUST00000163766 3611 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
Chaf1aQ9QWF0 Fam131b-202ENSMUST00000095974 3992 ntAPPRIS ALT1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Chaf1aQ9QWF0 Kyat1-204ENSMUST00000113661 2057 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Chaf1aQ9QWF0 Tspan32-206ENSMUST00000105925 1376 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Chaf1aQ9QWF0 Tgm1-203ENSMUST00000178034 2730 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Chaf1aQ9QWF0 Polr2a-202ENSMUST00000071213 5799 ntTSL 5 BASIC15.26■□□□□ 0.03
Chaf1aQ9QWF0 Pou4f3-201ENSMUST00000025374 2360 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Chaf1aQ9QWF0 Hps3-202ENSMUST00000108321 3385 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Chaf1aQ9QWF0 Chd7-201ENSMUST00000039267 9444 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
Chaf1aQ9QWF0 Psd2-206ENSMUST00000177432 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Chaf1aQ9QWF0 AC117194.1-201ENSMUST00000224847 3002 ntBASIC15.26■□□□□ 0.03
Chaf1aQ9QWF0 Osbp2-202ENSMUST00000101632 2697 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
Chaf1aQ9QWF0 I730028E13Rik-201ENSMUST00000216012 1959 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Chaf1aQ9QWF0 Gm28043-201ENSMUST00000130871 6521 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
Chaf1aQ9QWF0 Cfp-201ENSMUST00000001156 1636 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Chaf1aQ9QWF0 Gm9279-201ENSMUST00000223175 1606 ntBASIC15.26■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 33 ms