Protein–RNA interactions for Protein: Q9JIS7

Cacna1f, Voltage-dependent L-type calcium channel subunit alpha-1F, mousemouse

Predictions only

Length 1,985 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cacna1fQ9JIS7 Hax1-206ENSMUST00000197786 857 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Cacna1fQ9JIS7 Tmem176b-206ENSMUST00000203355 1202 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
Cacna1fQ9JIS7 Gm45186-201ENSMUST00000206874 478 ntBASIC15.25■□□□□ 0.03
Cacna1fQ9JIS7 Gm9445-201ENSMUST00000207454 1285 ntBASIC15.25■□□□□ 0.03
Cacna1fQ9JIS7 4930479H17Rik-201ENSMUST00000208824 292 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Cacna1fQ9JIS7 AC135669.1-202ENSMUST00000216742 540 ntBASIC15.25■□□□□ 0.03
Cacna1fQ9JIS7 Mink1-202ENSMUST00000072873 4610 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
Cacna1fQ9JIS7 Gm11532-201ENSMUST00000128111 5272 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Cacna1fQ9JIS7 Pid1-207ENSMUST00000177458 2521 ntTSL 2 BASIC15.25■□□□□ 0.03
Cacna1fQ9JIS7 Lmntd2-202ENSMUST00000170841 2077 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Cacna1fQ9JIS7 Ctnna2-204ENSMUST00000160894 4162 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Cacna1fQ9JIS7 Fam199x-201ENSMUST00000047852 8299 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Cacna1fQ9JIS7 Haus5-201ENSMUST00000019697 2187 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Cacna1fQ9JIS7 Lhx1-201ENSMUST00000018842 3846 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Cacna1fQ9JIS7 Prss42-201ENSMUST00000035715 1584 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Cacna1fQ9JIS7 Smarcd2-203ENSMUST00000106843 2548 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Cacna1fQ9JIS7 Gm5124-201ENSMUST00000127554 1970 ntTSL 5 BASIC15.25■□□□□ 0.03
Cacna1fQ9JIS7 Olfr317-202ENSMUST00000215513 2769 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
Cacna1fQ9JIS7 Olfr317-203ENSMUST00000216196 2781 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
Cacna1fQ9JIS7 Gm13850-201ENSMUST00000140465 623 ntTSL 3 BASIC15.25■□□□□ 0.03
Cacna1fQ9JIS7 Morn2-202ENSMUST00000227729 656 ntBASIC15.25■□□□□ 0.03
Cacna1fQ9JIS7 Tnfrsf17-201ENSMUST00000023140 815 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Cacna1fQ9JIS7 Fmr1nb-202ENSMUST00000071848 842 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
Cacna1fQ9JIS7 Hp1bp3-202ENSMUST00000097836 3113 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Cacna1fQ9JIS7 Gnl3-201ENSMUST00000037739 1947 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Cacna1fQ9JIS7 Hnrnpa2b1-204ENSMUST00000203220 1638 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Cacna1fQ9JIS7 Ralgds-201ENSMUST00000028170 3590 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
Cacna1fQ9JIS7 Map3k6-201ENSMUST00000030677 4334 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Cacna1fQ9JIS7 Zfp451-201ENSMUST00000019861 3958 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
Cacna1fQ9JIS7 Golim4-208ENSMUST00000167078 2902 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
Cacna1fQ9JIS7 Pxn-214ENSMUST00000212819 1689 ntTSL 5 BASIC15.24■□□□□ 0.03
Cacna1fQ9JIS7 Slfn2-201ENSMUST00000038038 1664 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Cacna1fQ9JIS7 Rasal3-204ENSMUST00000135618 3293 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
Cacna1fQ9JIS7 Them4-201ENSMUST00000049822 1781 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Cacna1fQ9JIS7 Abcb4-201ENSMUST00000003717 4079 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Cacna1fQ9JIS7 Gm24255-201ENSMUST00000104481 128 ntBASIC15.24■□□□□ 0.03
Cacna1fQ9JIS7 Mrap2-202ENSMUST00000113149 2112 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
Cacna1fQ9JIS7 Gm8805-201ENSMUST00000117848 313 ntBASIC15.24■□□□□ 0.03
Cacna1fQ9JIS7 Gm14704-201ENSMUST00000120300 874 ntBASIC15.24■□□□□ 0.03
Cacna1fQ9JIS7 Eif4e1b-204ENSMUST00000132005 706 ntTSL 2 BASIC15.24■□□□□ 0.03
Cacna1fQ9JIS7 F630206G17Rik-201ENSMUST00000137002 685 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Cacna1fQ9JIS7 Gm7008-202ENSMUST00000170019 402 ntTSL 2 BASIC15.24■□□□□ 0.03
Cacna1fQ9JIS7 Rhoc-204ENSMUST00000176347 583 ntTSL 5 BASIC15.24■□□□□ 0.03
Cacna1fQ9JIS7 1700065D16Rik-203ENSMUST00000189279 393 ntTSL 2 BASIC15.24■□□□□ 0.03
Cacna1fQ9JIS7 Caly-203ENSMUST00000211044 1029 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
Cacna1fQ9JIS7 Itln1-201ENSMUST00000043094 1141 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Cacna1fQ9JIS7 1700029I15Rik-201ENSMUST00000054316 364 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Cacna1fQ9JIS7 Trim41-201ENSMUST00000047145 3432 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Cacna1fQ9JIS7 Cadps2-212ENSMUST00000163871 4969 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
Cacna1fQ9JIS7 Alkbh3-202ENSMUST00000111240 1395 ntTSL 5 BASIC15.24■□□□□ 0.03
Cacna1fQ9JIS7 Rnf180-201ENSMUST00000069686 1728 ntAPPRIS P2 TSL 5 BASIC15.24■□□□□ 0.03
Cacna1fQ9JIS7 Gm11992-201ENSMUST00000043285 2400 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Cacna1fQ9JIS7 Krt71-201ENSMUST00000023710 2185 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Cacna1fQ9JIS7 Sema3b-204ENSMUST00000102531 2958 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Cacna1fQ9JIS7 Mansc1-201ENSMUST00000047443 2376 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Cacna1fQ9JIS7 Zfp422-202ENSMUST00000079749 3187 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Cacna1fQ9JIS7 Myh10-204ENSMUST00000108673 1315 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Cacna1fQ9JIS7 Yipf1-201ENSMUST00000075693 1321 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Cacna1fQ9JIS7 Iqsec1-202ENSMUST00000101153 8036 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
Cacna1fQ9JIS7 Usf1-207ENSMUST00000160486 1878 ntTSL 2 BASIC15.24■□□□□ 0.03
Cacna1fQ9JIS7 Arl6ip6-201ENSMUST00000028336 2548 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Cacna1fQ9JIS7 Arhgap10-201ENSMUST00000076316 3084 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Cacna1fQ9JIS7 Pygo2-201ENSMUST00000060061 3198 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Cacna1fQ9JIS7 Park7-202ENSMUST00000105673 919 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
Cacna1fQ9JIS7 Mkl2-203ENSMUST00000115809 667 ntTSL 2 BASIC15.24■□□□□ 0.03
Cacna1fQ9JIS7 Gm11439-201ENSMUST00000118598 409 ntBASIC15.24■□□□□ 0.03
Cacna1fQ9JIS7 Mrps17-205ENSMUST00000119985 859 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
Cacna1fQ9JIS7 4933407E24Rik-201ENSMUST00000133499 969 ntTSL 2 BASIC15.24■□□□□ 0.03
Cacna1fQ9JIS7 Gm13316-201ENSMUST00000140537 691 ntBASIC15.24■□□□□ 0.03
Cacna1fQ9JIS7 Gm37489-201ENSMUST00000191883 159 ntBASIC15.24■□□□□ 0.03
Cacna1fQ9JIS7 CT573034.1-201ENSMUST00000222983 313 ntBASIC15.24■□□□□ 0.03
Cacna1fQ9JIS7 Rps3a1-201ENSMUST00000029722 977 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Cacna1fQ9JIS7 Olfr156-202ENSMUST00000079465 1099 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
Cacna1fQ9JIS7 Rpl30-201ENSMUST00000009039 570 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Cacna1fQ9JIS7 Cstf3-201ENSMUST00000028599 2817 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Cacna1fQ9JIS7 Trappc10-201ENSMUST00000000384 5047 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Cacna1fQ9JIS7 4933411K16Rik-201ENSMUST00000164518 1380 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
Cacna1fQ9JIS7 A830018L16Rik-208ENSMUST00000171690 6158 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
Cacna1fQ9JIS7 Ap4b1-202ENSMUST00000076599 2692 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Cacna1fQ9JIS7 Maged2-204ENSMUST00000112700 2107 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Cacna1fQ9JIS7 Fetub-201ENSMUST00000023587 1573 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Cacna1fQ9JIS7 4930474N05Rik-203ENSMUST00000226305 2313 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
Cacna1fQ9JIS7 Hnrnpc-211ENSMUST00000228748 1691 ntAPPRIS P5 BASIC15.23■□□□□ 0.03
Cacna1fQ9JIS7 Smpd1-201ENSMUST00000046983 2412 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Cacna1fQ9JIS7 Marveld3-202ENSMUST00000051430 2447 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Cacna1fQ9JIS7 Foxo1-201ENSMUST00000053764 8665 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Cacna1fQ9JIS7 Srcin1-203ENSMUST00000107596 7054 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Cacna1fQ9JIS7 Ddx51-201ENSMUST00000031478 4846 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Cacna1fQ9JIS7 1500009C09Rik-201ENSMUST00000136948 1526 ntAPPRIS P5 TSL 3 BASIC15.23■□□□□ 0.03
Cacna1fQ9JIS7 Psph-201ENSMUST00000031399 1733 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Cacna1fQ9JIS7 Npas3-204ENSMUST00000223358 3143 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Cacna1fQ9JIS7 Gm24830-201ENSMUST00000102024 166 ntBASIC15.23■□□□□ 0.03
Cacna1fQ9JIS7 Rpl13-ps1-201ENSMUST00000121801 668 ntBASIC15.23■□□□□ 0.03
Cacna1fQ9JIS7 Rims3-204ENSMUST00000171363 977 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Cacna1fQ9JIS7 Gm8738-201ENSMUST00000172606 329 ntBASIC15.23■□□□□ 0.03
Cacna1fQ9JIS7 Gm25890-201ENSMUST00000177643 165 ntBASIC15.23■□□□□ 0.03
Cacna1fQ9JIS7 Rnu1b2-201ENSMUST00000178073 165 ntBASIC15.23■□□□□ 0.03
Cacna1fQ9JIS7 Rnu1b1-201ENSMUST00000178250 165 ntBASIC15.23■□□□□ 0.03
Cacna1fQ9JIS7 Gm22614-201ENSMUST00000178300 165 ntBASIC15.23■□□□□ 0.03
Cacna1fQ9JIS7 Ceacam1-209ENSMUST00000206687 1061 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 54.4 ms