Protein–RNA interactions for Protein: Q9ES00

Ube4b, Ubiquitin conjugation factor E4 B, mousemouse

Predictions only

Length 1,173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube4bQ9ES00 Fgd2-201ENSMUST00000024810 2612 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Ube4bQ9ES00 Mrpl46-201ENSMUST00000032841 1134 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Ube4bQ9ES00 Cmtm8-201ENSMUST00000047013 1064 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Ube4bQ9ES00 Bhlha9-201ENSMUST00000056184 1207 ntAPPRIS P1 BASIC13.09□□□□□ -0.31
Ube4bQ9ES00 Gm15590-201ENSMUST00000078419 552 ntBASIC13.09□□□□□ -0.31
Ube4bQ9ES00 Rbm39-203ENSMUST00000109587 2810 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
Ube4bQ9ES00 H2-Q6-202ENSMUST00000174699 2085 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
Ube4bQ9ES00 Gm16582-201ENSMUST00000159627 1930 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Ube4bQ9ES00 AI467606-201ENSMUST00000056288 1932 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Ube4bQ9ES00 Gm13730-201ENSMUST00000121036 1462 ntBASIC13.09□□□□□ -0.31
Ube4bQ9ES00 Urgcp-202ENSMUST00000093362 5089 ntAPPRIS P4 TSL 1 (best) BASIC13.09□□□□□ -0.31
Ube4bQ9ES00 Slc44a4-201ENSMUST00000007249 2261 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Ube4bQ9ES00 Fam214b-201ENSMUST00000036462 3074 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Ube4bQ9ES00 Hnrnpdl-202ENSMUST00000128187 2752 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Ube4bQ9ES00 Epb41l2-201ENSMUST00000053748 4385 ntAPPRIS P2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Ube4bQ9ES00 Mmp28-202ENSMUST00000103209 3438 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Ube4bQ9ES00 Tmem63b-201ENSMUST00000113523 3284 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
Ube4bQ9ES00 Clpx-202ENSMUST00000113824 2809 ntTSL 1 (best) BASIC13.08□□□□□ -0.31
Ube4bQ9ES00 Irf6-201ENSMUST00000076521 4113 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
Ube4bQ9ES00 Vdac3-201ENSMUST00000009036 1354 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.31
Ube4bQ9ES00 Cacna1g-208ENSMUST00000107790 8035 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.31
Ube4bQ9ES00 Rp2-202ENSMUST00000115387 4498 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Ube4bQ9ES00 Map3k11-201ENSMUST00000004156 3801 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Ube4bQ9ES00 Sgip1-201ENSMUST00000066824 4305 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Ube4bQ9ES00 Ttpa-203ENSMUST00000121491 2862 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Ube4bQ9ES00 Selenbp1-201ENSMUST00000090839 1712 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Ube4bQ9ES00 Selenbp2-201ENSMUST00000090848 1719 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Ube4bQ9ES00 Synpo-209ENSMUST00000143275 5040 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.32
Ube4bQ9ES00 Gm3764-205ENSMUST00000181134 2203 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Ube4bQ9ES00 Trp53i11-202ENSMUST00000111266 2703 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Ube4bQ9ES00 Arhgap22-202ENSMUST00000111956 2596 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Ube4bQ9ES00 P4ha1-203ENSMUST00000105466 2918 ntAPPRIS ALT1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Ube4bQ9ES00 Eme1-201ENSMUST00000039949 2444 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Ube4bQ9ES00 Plekhb1-206ENSMUST00000107047 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Ube4bQ9ES00 Entpd2-201ENSMUST00000028328 1935 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Ube4bQ9ES00 Matn2-203ENSMUST00000226766 3252 ntBASIC13.08□□□□□ -0.32
Ube4bQ9ES00 Tcf12-218ENSMUST00000184783 3489 ntAPPRIS P3 TSL 5 BASIC13.08□□□□□ -0.32
Ube4bQ9ES00 Mras-203ENSMUST00000122384 1122 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Ube4bQ9ES00 Egfl8-201ENSMUST00000015611 1150 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Ube4bQ9ES00 Gm30097-202ENSMUST00000194580 329 ntTSL 3 BASIC13.08□□□□□ -0.32
Ube4bQ9ES00 Cela3a-201ENSMUST00000024200 958 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
Ube4bQ9ES00 Mrps18a-201ENSMUST00000024763 884 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Ube4bQ9ES00 Egfl8-202ENSMUST00000097345 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Ube4bQ9ES00 2310011J03Rik-201ENSMUST00000020341 1649 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Ube4bQ9ES00 Idh3b-201ENSMUST00000028892 1616 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Ube4bQ9ES00 Adprhl1-205ENSMUST00000204916 5228 ntTSL 5 BASIC13.08□□□□□ -0.32
Ube4bQ9ES00 Crhr2-201ENSMUST00000003568 2695 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Ube4bQ9ES00 Ripk4-202ENSMUST00000113743 3743 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Ube4bQ9ES00 Sun2-202ENSMUST00000089311 3709 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
Ube4bQ9ES00 Larp4-202ENSMUST00000100206 6523 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
Ube4bQ9ES00 Plxdc1-201ENSMUST00000017561 2881 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Ube4bQ9ES00 AC155298.2-201ENSMUST00000225485 6226 ntBASIC13.08□□□□□ -0.32
Ube4bQ9ES00 Cacna1c-225ENSMUST00000219223 7483 ntTSL 5 BASIC13.08□□□□□ -0.32
Ube4bQ9ES00 Dhdds-204ENSMUST00000105887 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Ube4bQ9ES00 Zscan20-202ENSMUST00000097877 5364 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Ube4bQ9ES00 1500011B03Rik-202ENSMUST00000112160 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Ube4bQ9ES00 Gm11873-201ENSMUST00000117877 1304 ntBASIC13.08□□□□□ -0.32
Ube4bQ9ES00 Atxn7l1-202ENSMUST00000090597 2563 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Ube4bQ9ES00 Brdt-201ENSMUST00000031215 4745 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Ube4bQ9ES00 Fam214b-202ENSMUST00000107956 3107 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
Ube4bQ9ES00 Myo10-202ENSMUST00000110457 8125 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Ube4bQ9ES00 Sass6-206ENSMUST00000198386 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Ube4bQ9ES00 Hnrnpr-201ENSMUST00000084219 2647 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Ube4bQ9ES00 Tacr2-201ENSMUST00000020278 2258 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Ube4bQ9ES00 2310007B03Rik-201ENSMUST00000043718 2299 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Ube4bQ9ES00 Dtd1-201ENSMUST00000028917 1350 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Ube4bQ9ES00 Gm5385-201ENSMUST00000118988 1559 ntBASIC13.07□□□□□ -0.32
Ube4bQ9ES00 Amer2-201ENSMUST00000022561 10506 ntAPPRIS P1 BASIC13.07□□□□□ -0.32
Ube4bQ9ES00 Klhl30-201ENSMUST00000027533 3089 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Ube4bQ9ES00 Cpt1c-206ENSMUST00000212836 2716 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Ube4bQ9ES00 Vcpip1-201ENSMUST00000057438 9749 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Ube4bQ9ES00 Rbpms2-202ENSMUST00000169003 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Ube4bQ9ES00 Miip-201ENSMUST00000030886 1813 ntAPPRIS P2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Ube4bQ9ES00 Vps4b-202ENSMUST00000112736 4539 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Ube4bQ9ES00 Syt2-204ENSMUST00000188842 3386 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Ube4bQ9ES00 Sorl1-201ENSMUST00000060989 10715 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Ube4bQ9ES00 Gm15440-201ENSMUST00000110042 1231 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
Ube4bQ9ES00 Gm12350-201ENSMUST00000121208 462 ntBASIC13.07□□□□□ -0.32
Ube4bQ9ES00 Cgrrf1-204ENSMUST00000140114 419 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Ube4bQ9ES00 Gm11750-201ENSMUST00000146016 583 ntTSL 5 BASIC13.07□□□□□ -0.32
Ube4bQ9ES00 1700039E22Rik-201ENSMUST00000174082 770 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Ube4bQ9ES00 Gm4691-201ENSMUST00000182339 1000 ntBASIC13.07□□□□□ -0.32
Ube4bQ9ES00 H2-Bl-211ENSMUST00000195838 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Ube4bQ9ES00 Gm2451-201ENSMUST00000199447 999 ntBASIC13.07□□□□□ -0.32
Ube4bQ9ES00 Gm10290-201ENSMUST00000200451 999 ntBASIC13.07□□□□□ -0.32
Ube4bQ9ES00 Pard6a-204ENSMUST00000212352 1234 ntTSL 2 BASIC13.07□□□□□ -0.32
Ube4bQ9ES00 9430038I01Rik-201ENSMUST00000068996 1126 ntAPPRIS P2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Ube4bQ9ES00 Hist1h4j-201ENSMUST00000087714 774 ntAPPRIS P1 BASIC13.07□□□□□ -0.32
Ube4bQ9ES00 Gm10044-203ENSMUST00000166813 1471 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Ube4bQ9ES00 Pcdhb18-201ENSMUST00000055949 5041 ntAPPRIS P1 BASIC13.07□□□□□ -0.32
Ube4bQ9ES00 Rnf17-202ENSMUST00000223627 2077 ntBASIC13.07□□□□□ -0.32
Ube4bQ9ES00 Tkfc-201ENSMUST00000037678 2253 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Ube4bQ9ES00 Arntl-206ENSMUST00000211770 2464 ntTSL 5 BASIC13.07□□□□□ -0.32
Ube4bQ9ES00 Ubxn10-203ENSMUST00000105811 2926 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Ube4bQ9ES00 Zfp207-206ENSMUST00000165565 2311 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Ube4bQ9ES00 Cdc45-201ENSMUST00000000028 2143 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
Ube4bQ9ES00 Spo11-201ENSMUST00000050442 1709 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
Ube4bQ9ES00 Olah-201ENSMUST00000027955 1533 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Ube4bQ9ES00 Hpcal1-201ENSMUST00000071858 1526 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Ube4bQ9ES00 4921511I17Rik-201ENSMUST00000220545 1341 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 51.9 ms