Protein–RNA interactions for Protein: Q9EQM3

Nkx2-4, Homeobox protein Nkx-2.4, mousemouse

Predictions only

Length 354 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-4Q9EQM3 Olfr667-201ENSMUST00000071362 981 ntAPPRIS P1 BASIC13.93□□□□□ -0.18
Nkx2-4Q9EQM3 Olfr666-201ENSMUST00000081116 957 ntAPPRIS P1 BASIC13.93□□□□□ -0.18
Nkx2-4Q9EQM3 Coq7-202ENSMUST00000098090 1215 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Nkx2-4Q9EQM3 Col2a1-202ENSMUST00000088355 4862 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Nkx2-4Q9EQM3 Rab10-201ENSMUST00000021001 3513 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Nkx2-4Q9EQM3 Klf5-201ENSMUST00000005279 3352 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Nkx2-4Q9EQM3 Trf-201ENSMUST00000035158 2571 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Nkx2-4Q9EQM3 G630022F23Rik-201ENSMUST00000202923 3627 ntBASIC13.93□□□□□ -0.18
Nkx2-4Q9EQM3 Islr2-210ENSMUST00000215950 4109 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
Nkx2-4Q9EQM3 Iqcm-203ENSMUST00000212704 2035 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Nkx2-4Q9EQM3 Acsl3-201ENSMUST00000035779 3950 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Nkx2-4Q9EQM3 Gpr19-208ENSMUST00000165392 1643 ntTSL 3 BASIC13.93□□□□□ -0.18
Nkx2-4Q9EQM3 Kcnq2-202ENSMUST00000049792 2920 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Nkx2-4Q9EQM3 Gpr19-202ENSMUST00000066107 1647 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Nkx2-4Q9EQM3 Epb41l1-204ENSMUST00000103137 6490 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Nkx2-4Q9EQM3 Gm26534-201ENSMUST00000181687 1724 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Nkx2-4Q9EQM3 Zkscan14-203ENSMUST00000198959 2243 ntBASIC13.92□□□□□ -0.18
Nkx2-4Q9EQM3 Pcdh10-204ENSMUST00000193252 4638 ntAPPRIS ALT2 BASIC13.92□□□□□ -0.18
Nkx2-4Q9EQM3 Shank1-202ENSMUST00000107935 6649 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
Nkx2-4Q9EQM3 Tsta3-201ENSMUST00000023231 1311 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Nkx2-4Q9EQM3 Narfl-201ENSMUST00000002350 2555 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Nkx2-4Q9EQM3 Pde1c-203ENSMUST00000164037 3068 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Nkx2-4Q9EQM3 Wdr91-201ENSMUST00000081214 2682 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Nkx2-4Q9EQM3 Sike1-201ENSMUST00000029447 7375 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Nkx2-4Q9EQM3 Fzd10-201ENSMUST00000117102 3250 ntAPPRIS P1 BASIC13.92□□□□□ -0.18
Nkx2-4Q9EQM3 Adamts7-201ENSMUST00000113059 5379 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
Nkx2-4Q9EQM3 March4-201ENSMUST00000047786 4553 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Nkx2-4Q9EQM3 Zbed4-201ENSMUST00000041297 5425 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Nkx2-4Q9EQM3 Ppt1-201ENSMUST00000030412 2381 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Nkx2-4Q9EQM3 Prr15l-203ENSMUST00000107633 930 ntAPPRIS P1 TSL 2 BASIC13.92□□□□□ -0.18
Nkx2-4Q9EQM3 Bud23-203ENSMUST00000111205 1169 ntAPPRIS ALT2 TSL 3 BASIC13.92□□□□□ -0.18
Nkx2-4Q9EQM3 Tagln2-201ENSMUST00000111228 716 ntAPPRIS P1 TSL 3 BASIC13.92□□□□□ -0.18
Nkx2-4Q9EQM3 Mymx-201ENSMUST00000113529 442 ntAPPRIS ALT2 TSL 2 BASIC13.92□□□□□ -0.18
Nkx2-4Q9EQM3 Thoc6-203ENSMUST00000115489 1083 ntTSL 5 BASIC13.92□□□□□ -0.18
Nkx2-4Q9EQM3 Gm12201-201ENSMUST00000120657 1234 ntBASIC13.92□□□□□ -0.18
Nkx2-4Q9EQM3 Dusp13-204ENSMUST00000120984 976 ntAPPRIS ALT1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Nkx2-4Q9EQM3 Gm14277-201ENSMUST00000121195 360 ntBASIC13.92□□□□□ -0.18
Nkx2-4Q9EQM3 1700125G22Rik-201ENSMUST00000181124 861 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Nkx2-4Q9EQM3 6530403H02Rik-204ENSMUST00000183276 659 ntTSL 3 BASIC13.92□□□□□ -0.18
Nkx2-4Q9EQM3 Gm29787-201ENSMUST00000222129 849 ntBASIC13.92□□□□□ -0.18
Nkx2-4Q9EQM3 Abraxas1-202ENSMUST00000055245 2139 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Nkx2-4Q9EQM3 Zfp932-201ENSMUST00000099484 451 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Nkx2-4Q9EQM3 Trim24-203ENSMUST00000120428 3940 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Nkx2-4Q9EQM3 Crem-203ENSMUST00000082141 2820 ntTSL 5 BASIC13.92□□□□□ -0.18
Nkx2-4Q9EQM3 Crb2-201ENSMUST00000050372 6372 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
Nkx2-4Q9EQM3 Prss41-204ENSMUST00000151797 1743 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Nkx2-4Q9EQM3 Repin1-202ENSMUST00000118229 3138 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Nkx2-4Q9EQM3 Sall2-202ENSMUST00000135523 4773 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Nkx2-4Q9EQM3 Loxl4-203ENSMUST00000164786 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Nkx2-4Q9EQM3 Cyp1a2-201ENSMUST00000034860 1940 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Nkx2-4Q9EQM3 Svip-201ENSMUST00000098414 3053 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Nkx2-4Q9EQM3 Tcf4-248ENSMUST00000202354 2120 ntTSL 5 BASIC13.91□□□□□ -0.18
Nkx2-4Q9EQM3 Tcf4-257ENSMUST00000202772 2125 ntTSL 5 BASIC13.91□□□□□ -0.18
Nkx2-4Q9EQM3 Alas1-201ENSMUST00000074082 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Nkx2-4Q9EQM3 4931406C07Rik-208ENSMUST00000216955 1750 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Nkx2-4Q9EQM3 Pde8a-201ENSMUST00000026672 3802 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Nkx2-4Q9EQM3 Tor1b-201ENSMUST00000028199 3039 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Nkx2-4Q9EQM3 Dnajc1-202ENSMUST00000091418 5070 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Nkx2-4Q9EQM3 Fbxo21-201ENSMUST00000035579 3883 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Nkx2-4Q9EQM3 Ube2d3-210ENSMUST00000197539 2515 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Nkx2-4Q9EQM3 Gm44579-201ENSMUST00000142443 2064 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
Nkx2-4Q9EQM3 Pcolce2-201ENSMUST00000015498 4438 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Nkx2-4Q9EQM3 Rps6ka5-201ENSMUST00000043599 4406 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Nkx2-4Q9EQM3 Foxp2-207ENSMUST00000115477 6760 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
Nkx2-4Q9EQM3 Ttc13-203ENSMUST00000118134 3277 ntTSL 5 BASIC13.91□□□□□ -0.18
Nkx2-4Q9EQM3 Rps19-203ENSMUST00000108430 774 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Nkx2-4Q9EQM3 9230102O04Rik-201ENSMUST00000114915 528 ntAPPRIS P1 TSL 2 BASIC13.91□□□□□ -0.18
Nkx2-4Q9EQM3 Gm13886-201ENSMUST00000117876 1183 ntBASIC13.91□□□□□ -0.18
Nkx2-4Q9EQM3 Gm11439-201ENSMUST00000118598 409 ntBASIC13.91□□□□□ -0.18
Nkx2-4Q9EQM3 Gm4909-201ENSMUST00000118749 794 ntBASIC13.91□□□□□ -0.18
Nkx2-4Q9EQM3 Gm12566-201ENSMUST00000121479 359 ntBASIC13.91□□□□□ -0.18
Nkx2-4Q9EQM3 Gm16479-201ENSMUST00000121706 932 ntBASIC13.91□□□□□ -0.18
Nkx2-4Q9EQM3 Gm5869-201ENSMUST00000200248 1257 ntBASIC13.91□□□□□ -0.18
Nkx2-4Q9EQM3 Ube2a-202ENSMUST00000200835 911 ntTSL 5 BASIC13.91□□□□□ -0.18
Nkx2-4Q9EQM3 Atraid-205ENSMUST00000201136 894 ntAPPRIS ALT2 TSL 3 BASIC13.91□□□□□ -0.18
Nkx2-4Q9EQM3 Ube2a-209ENSMUST00000202991 715 ntAPPRIS ALT1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Nkx2-4Q9EQM3 Gm43947-201ENSMUST00000203019 959 ntBASIC13.91□□□□□ -0.18
Nkx2-4Q9EQM3 Gm18212-201ENSMUST00000211678 889 ntBASIC13.91□□□□□ -0.18
Nkx2-4Q9EQM3 Gm19208-201ENSMUST00000213861 912 ntBASIC13.91□□□□□ -0.18
Nkx2-4Q9EQM3 Fam173b-201ENSMUST00000042702 1164 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Nkx2-4Q9EQM3 S100a8-201ENSMUST00000069927 486 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Nkx2-4Q9EQM3 Col9a2-201ENSMUST00000030372 2924 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Nkx2-4Q9EQM3 Tnfaip8-207ENSMUST00000148159 1921 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Nkx2-4Q9EQM3 Ubqln1-201ENSMUST00000058735 3686 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Nkx2-4Q9EQM3 Chmp4c-201ENSMUST00000029049 6188 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Nkx2-4Q9EQM3 Bad-201ENSMUST00000025910 1451 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
Nkx2-4Q9EQM3 Fbp1-201ENSMUST00000092888 1479 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Nkx2-4Q9EQM3 Gm9913-201ENSMUST00000066157 2793 ntAPPRIS P1 BASIC13.91□□□□□ -0.18
Nkx2-4Q9EQM3 Nrxn1-204ENSMUST00000159778 3414 ntTSL 5 BASIC13.91□□□□□ -0.18
Nkx2-4Q9EQM3 Arhgap44-201ENSMUST00000047463 4074 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Nkx2-4Q9EQM3 Pde7b-205ENSMUST00000169404 1697 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
Nkx2-4Q9EQM3 Kcp-201ENSMUST00000078112 4775 ntTSL 5 BASIC13.91□□□□□ -0.18
Nkx2-4Q9EQM3 Pycr1-201ENSMUST00000026133 1861 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Nkx2-4Q9EQM3 Mmp21-201ENSMUST00000033278 1858 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Nkx2-4Q9EQM3 Arid4b-201ENSMUST00000039538 5844 ntTSL 5 BASIC13.91□□□□□ -0.18
Nkx2-4Q9EQM3 Myo1c-204ENSMUST00000108431 4718 ntAPPRIS P2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Nkx2-4Q9EQM3 Dpysl5-202ENSMUST00000101442 1309 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Nkx2-4Q9EQM3 Akt1-205ENSMUST00000128300 1342 ntTSL 5 BASIC13.9□□□□□ -0.18
Nkx2-4Q9EQM3 Gm45605-201ENSMUST00000210265 4269 ntBASIC13.9□□□□□ -0.18
Nkx2-4Q9EQM3 Rnf207-201ENSMUST00000076183 2466 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 31.9 ms