Protein–RNA interactions for Protein: Q9D554

Sf3a3, Splicing factor 3A subunit 3, mousemouse

Known RBP Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3a3Q9D554 1810008I18Rik-202ENSMUST00000187848 819 ntTSL 3 BASIC13.8□□□□□ -0.2
Sf3a3Q9D554 Gm33142-201ENSMUST00000193913 867 ntBASIC13.8□□□□□ -0.2
Sf3a3Q9D554 Cacna2d1-207ENSMUST00000196750 1272 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Sf3a3Q9D554 Gm5712-201ENSMUST00000199748 1043 ntBASIC13.8□□□□□ -0.2
Sf3a3Q9D554 Pold4-201ENSMUST00000025773 910 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Sf3a3Q9D554 2310002L09Rik-201ENSMUST00000030101 958 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
Sf3a3Q9D554 4930465K10Rik-201ENSMUST00000056675 1238 ntBASIC13.8□□□□□ -0.2
Sf3a3Q9D554 Pard6a-202ENSMUST00000098444 1273 ntTSL 2 BASIC13.8□□□□□ -0.2
Sf3a3Q9D554 Lrif1-202ENSMUST00000098751 929 ntTSL 2 BASIC13.8□□□□□ -0.2
Sf3a3Q9D554 Rtn3-203ENSMUST00000088169 1709 ntTSL 5 BASIC13.8□□□□□ -0.2
Sf3a3Q9D554 Rpe-201ENSMUST00000027157 2692 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Sf3a3Q9D554 Chrdl1-202ENSMUST00000074660 4096 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
Sf3a3Q9D554 Nepn-201ENSMUST00000067085 1844 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Sf3a3Q9D554 Grk4-202ENSMUST00000074651 3234 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Sf3a3Q9D554 Nptn-206ENSMUST00000176557 1898 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Sf3a3Q9D554 Prok2-202ENSMUST00000032152 1423 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Sf3a3Q9D554 Gga3-201ENSMUST00000019135 3816 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
Sf3a3Q9D554 Cisd2-201ENSMUST00000029815 3361 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Sf3a3Q9D554 Nhlrc2-201ENSMUST00000071423 3934 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Sf3a3Q9D554 Casp6-201ENSMUST00000029626 1456 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Sf3a3Q9D554 H2-Q10-201ENSMUST00000068291 1473 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Sf3a3Q9D554 Hadhb-202ENSMUST00000114783 2045 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Sf3a3Q9D554 Mest-211ENSMUST00000163949 2561 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
Sf3a3Q9D554 Gm42829-201ENSMUST00000198417 2585 ntBASIC13.79□□□□□ -0.2
Sf3a3Q9D554 Sphk2-203ENSMUST00000210060 2577 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Sf3a3Q9D554 Capn3-203ENSMUST00000090028 2640 ntTSL 5 BASIC13.79□□□□□ -0.2
Sf3a3Q9D554 Gm45706-201ENSMUST00000213063 2136 ntBASIC13.79□□□□□ -0.2
Sf3a3Q9D554 Pik3r6-201ENSMUST00000060441 3237 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Sf3a3Q9D554 Xrcc1-201ENSMUST00000063249 2155 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Sf3a3Q9D554 Ptger4-202ENSMUST00000120563 3312 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Sf3a3Q9D554 Psmd11-201ENSMUST00000017572 2848 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Sf3a3Q9D554 Ercc4-201ENSMUST00000023206 3480 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Sf3a3Q9D554 Lmf2-201ENSMUST00000023283 2906 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Sf3a3Q9D554 Gart-201ENSMUST00000023684 3518 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Sf3a3Q9D554 Igf2r-201ENSMUST00000024599 8887 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Sf3a3Q9D554 Mtch2-211ENSMUST00000150232 2377 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Sf3a3Q9D554 Eme1-201ENSMUST00000039949 2444 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Sf3a3Q9D554 Tubgcp3-201ENSMUST00000000776 3797 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Sf3a3Q9D554 Gm13597-201ENSMUST00000121239 375 ntBASIC13.79□□□□□ -0.2
Sf3a3Q9D554 Gm11536-201ENSMUST00000130733 535 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Sf3a3Q9D554 1500009L16Rik-201ENSMUST00000150459 1194 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Sf3a3Q9D554 Slc36a3os-201ENSMUST00000155883 520 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Sf3a3Q9D554 Gm25925-201ENSMUST00000158314 306 ntBASIC13.79□□□□□ -0.2
Sf3a3Q9D554 Gm21887-202ENSMUST00000179760 483 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
Sf3a3Q9D554 Mir9-3hg-206ENSMUST00000182937 636 ntTSL 3 BASIC13.79□□□□□ -0.2
Sf3a3Q9D554 Vps25-202ENSMUST00000042477 1106 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Sf3a3Q9D554 Lce1i-201ENSMUST00000090866 731 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Sf3a3Q9D554 Col6a2-201ENSMUST00000001181 3949 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Sf3a3Q9D554 Ska1-202ENSMUST00000177604 2605 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Sf3a3Q9D554 Gpr35-205ENSMUST00000186298 2647 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Sf3a3Q9D554 Ajuba-201ENSMUST00000054487 3397 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Sf3a3Q9D554 Zpbp2-204ENSMUST00000107511 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Sf3a3Q9D554 Hvcn1-201ENSMUST00000072602 2790 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Sf3a3Q9D554 Grm5-202ENSMUST00000125009 8047 ntAPPRIS P3 TSL 5 BASIC13.79□□□□□ -0.2
Sf3a3Q9D554 Creb3l3-201ENSMUST00000117422 2294 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Sf3a3Q9D554 Sectm1b-201ENSMUST00000039309 2287 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Sf3a3Q9D554 Ucp3-201ENSMUST00000032958 2448 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Sf3a3Q9D554 Camk2b-203ENSMUST00000066431 1603 ntAPPRIS ALT1 TSL 5 BASIC13.79□□□□□ -0.2
Sf3a3Q9D554 Ntsr1-202ENSMUST00000170448 2594 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Sf3a3Q9D554 Ccnk-201ENSMUST00000101055 2627 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
Sf3a3Q9D554 Bicd1-202ENSMUST00000086829 9667 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Sf3a3Q9D554 Camsap3-203ENSMUST00000207077 3832 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Sf3a3Q9D554 Ackr2-201ENSMUST00000050327 2853 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Sf3a3Q9D554 Stk38-202ENSMUST00000119274 1939 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Sf3a3Q9D554 Gm8281-202ENSMUST00000163719 1954 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
Sf3a3Q9D554 Reln-201ENSMUST00000062372 10885 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
Sf3a3Q9D554 Rnf224-201ENSMUST00000091318 2021 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Sf3a3Q9D554 Rgs6-222ENSMUST00000202210 3069 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
Sf3a3Q9D554 Slc33a1-201ENSMUST00000029402 3150 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Sf3a3Q9D554 Cd163l1-204ENSMUST00000209637 3210 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Sf3a3Q9D554 Gm44401-201ENSMUST00000204462 2375 ntBASIC13.78□□□□□ -0.2
Sf3a3Q9D554 Ccdc125-201ENSMUST00000057325 2413 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
Sf3a3Q9D554 Bpifa3-202ENSMUST00000109746 1102 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Sf3a3Q9D554 Gm29520-201ENSMUST00000191209 1067 ntTSL 5 BASIC13.78□□□□□ -0.2
Sf3a3Q9D554 AC148328.1-201ENSMUST00000216448 920 ntTSL 5 BASIC13.78□□□□□ -0.2
Sf3a3Q9D554 Mrps18a-201ENSMUST00000024763 884 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Sf3a3Q9D554 Mrpl17-201ENSMUST00000033170 1028 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Sf3a3Q9D554 Bex3-201ENSMUST00000053540 930 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
Sf3a3Q9D554 Klk15-201ENSMUST00000068625 845 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Sf3a3Q9D554 Cdkn2d-201ENSMUST00000086374 1264 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Sf3a3Q9D554 Esrrb-206ENSMUST00000167891 1344 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Sf3a3Q9D554 4930528D03Rik-201ENSMUST00000181528 1339 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Sf3a3Q9D554 Gm37472-201ENSMUST00000192342 4052 ntBASIC13.78□□□□□ -0.2
Sf3a3Q9D554 Egfl7-202ENSMUST00000102907 1372 ntAPPRIS P4 TSL 1 (best) BASIC13.78□□□□□ -0.2
Sf3a3Q9D554 Amn1-201ENSMUST00000095319 1369 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Sf3a3Q9D554 E2f7-209ENSMUST00000174857 2865 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Sf3a3Q9D554 Rabif-201ENSMUST00000047978 2861 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Sf3a3Q9D554 Kcnn1-204ENSMUST00000212086 2964 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Sf3a3Q9D554 2610028D06Rik-201ENSMUST00000215216 1713 ntBASIC13.78□□□□□ -0.2
Sf3a3Q9D554 B4galt1-201ENSMUST00000030121 3983 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Sf3a3Q9D554 4931428F04Rik-203ENSMUST00000212219 2044 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Sf3a3Q9D554 Cdkl2-204ENSMUST00000113143 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Sf3a3Q9D554 Psen1-201ENSMUST00000041806 2690 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
Sf3a3Q9D554 Acly-203ENSMUST00000107389 4426 ntAPPRIS ALT1 TSL 1 (best) BASIC13.77□□□□□ -0.2
Sf3a3Q9D554 Pcdhga11-201ENSMUST00000061279 4756 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
Sf3a3Q9D554 Sall4-201ENSMUST00000029061 5073 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
Sf3a3Q9D554 Nup160-201ENSMUST00000057481 5684 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
Sf3a3Q9D554 Tmtc3-201ENSMUST00000058154 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.2
Sf3a3Q9D554 Oraov1-203ENSMUST00000105895 1016 ntAPPRIS ALT2 TSL 2 BASIC13.77□□□□□ -0.21
Sf3a3Q9D554 Map7-202ENSMUST00000116259 3831 ntAPPRIS P2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 36.5 ms