Protein–RNA interactions for Protein: Q9CY97

Ssu72, RNA polymerase II subunit A C-terminal domain phosphatase SSU72, mousemouse

Known RBP Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ssu72Q9CY97 Hlf-201ENSMUST00000004051 5642 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Ssu72Q9CY97 Dnajc5-202ENSMUST00000108796 934 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
Ssu72Q9CY97 C030037D09Rik-202ENSMUST00000136201 1216 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Ssu72Q9CY97 Sar1b-201ENSMUST00000020653 1201 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Ssu72Q9CY97 Vsig2-206ENSMUST00000215957 851 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Ssu72Q9CY97 Nanos3-201ENSMUST00000070102 730 ntAPPRIS P2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Ssu72Q9CY97 Cox6b1-201ENSMUST00000075738 618 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Ssu72Q9CY97 Pabpn1l-201ENSMUST00000093059 1148 ntAPPRIS P2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Ssu72Q9CY97 Ddx19b-202ENSMUST00000065784 3104 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Ssu72Q9CY97 Cxcr5-204ENSMUST00000215293 2846 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Ssu72Q9CY97 Rhbdl1-202ENSMUST00000183929 1349 ntTSL 5 BASIC13.55□□□□□ -0.24
Ssu72Q9CY97 Mb21d1-201ENSMUST00000034898 3231 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Ssu72Q9CY97 AC151895.1-201ENSMUST00000219025 1742 ntBASIC13.55□□□□□ -0.24
Ssu72Q9CY97 Ccdc8-201ENSMUST00000094805 4809 ntAPPRIS P1 BASIC13.55□□□□□ -0.24
Ssu72Q9CY97 Dhrs4-201ENSMUST00000022821 1392 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Ssu72Q9CY97 Ttc25-202ENSMUST00000092684 2240 ntAPPRIS P2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Ssu72Q9CY97 2810408A11Rik-202ENSMUST00000100969 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Ssu72Q9CY97 Lypd1-201ENSMUST00000027582 1447 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Ssu72Q9CY97 Gm29455-201ENSMUST00000186504 2659 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Ssu72Q9CY97 Ssc5d-201ENSMUST00000057612 4348 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Ssu72Q9CY97 Mdm2-202ENSMUST00000105263 3145 ntTSL 5 BASIC13.55□□□□□ -0.24
Ssu72Q9CY97 Dnpep-209ENSMUST00000187836 1862 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
Ssu72Q9CY97 Ablim2-201ENSMUST00000054598 3564 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
Ssu72Q9CY97 Ankrd50-201ENSMUST00000094300 1944 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Ssu72Q9CY97 A530020G20Rik-202ENSMUST00000181070 3660 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Ssu72Q9CY97 Kcnn2-201ENSMUST00000066890 3682 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
Ssu72Q9CY97 Wdr54-205ENSMUST00000153148 4634 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Ssu72Q9CY97 Muc6-202ENSMUST00000189314 5087 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Ssu72Q9CY97 Nfatc2ip-201ENSMUST00000075671 3388 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Ssu72Q9CY97 Map2k7-206ENSMUST00000110998 3497 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Ssu72Q9CY97 Ccne2-201ENSMUST00000029866 3006 ntAPPRIS ALT1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Ssu72Q9CY97 Cdc45-201ENSMUST00000000028 2143 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
Ssu72Q9CY97 Plch2-210ENSMUST00000176194 5619 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
Ssu72Q9CY97 Tex22-202ENSMUST00000109729 735 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Ssu72Q9CY97 Ndufa1-201ENSMUST00000016571 419 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Ssu72Q9CY97 Mir3113-201ENSMUST00000175478 76 ntBASIC13.54□□□□□ -0.24
Ssu72Q9CY97 Prss54-202ENSMUST00000180075 1152 ntAPPRIS P3 TSL 5 BASIC13.54□□□□□ -0.24
Ssu72Q9CY97 Lce3c-201ENSMUST00000055375 567 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Ssu72Q9CY97 Hectd1-202ENSMUST00000179265 9012 ntTSL 5 BASIC13.54□□□□□ -0.24
Ssu72Q9CY97 Abat-202ENSMUST00000115838 1348 ntTSL 2 BASIC13.54□□□□□ -0.24
Ssu72Q9CY97 Fam221a-202ENSMUST00000121903 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Ssu72Q9CY97 Npepps-219ENSMUST00000172108 2924 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
Ssu72Q9CY97 4732471J01Rik-203ENSMUST00000206300 1887 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Ssu72Q9CY97 0610009O20Rik-201ENSMUST00000025314 2404 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Ssu72Q9CY97 Zbtb4-202ENSMUST00000108639 7811 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Ssu72Q9CY97 Gm45332-201ENSMUST00000210508 1949 ntTSL 5 BASIC13.54□□□□□ -0.24
Ssu72Q9CY97 Gm34016-201ENSMUST00000222678 1384 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Ssu72Q9CY97 Polr2a-202ENSMUST00000071213 5799 ntTSL 5 BASIC13.54□□□□□ -0.24
Ssu72Q9CY97 Nrd1-202ENSMUST00000102736 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Ssu72Q9CY97 Banp-201ENSMUST00000026354 1970 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Ssu72Q9CY97 Prg4-207ENSMUST00000162367 1480 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Ssu72Q9CY97 Dbndd1-203ENSMUST00000177240 1463 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Ssu72Q9CY97 Syce1-201ENSMUST00000026553 1460 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Ssu72Q9CY97 Lgals8-203ENSMUST00000124888 2843 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Ssu72Q9CY97 Gm13288-201ENSMUST00000094977 2850 ntAPPRIS P1 BASIC13.54□□□□□ -0.24
Ssu72Q9CY97 Aire-207ENSMUST00000140636 1615 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Ssu72Q9CY97 Hspb8-201ENSMUST00000036991 1816 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Ssu72Q9CY97 Siglecf-203ENSMUST00000122423 2607 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
Ssu72Q9CY97 Edrf1-202ENSMUST00000128901 4380 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
Ssu72Q9CY97 Fasn-201ENSMUST00000055655 10050 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Ssu72Q9CY97 Trav3-1-201ENSMUST00000103569 385 ntAPPRIS P1 BASIC13.53□□□□□ -0.24
Ssu72Q9CY97 Trav3-4-201ENSMUST00000103670 458 ntAPPRIS P1 BASIC13.53□□□□□ -0.24
Ssu72Q9CY97 2200002J24Rik-201ENSMUST00000013227 333 ntAPPRIS P1 TSL 3 BASIC13.53□□□□□ -0.24
Ssu72Q9CY97 Timm23-201ENSMUST00000013845 1173 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Ssu72Q9CY97 Mkln1os-202ENSMUST00000144232 964 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Ssu72Q9CY97 Gm9719-201ENSMUST00000162765 543 ntBASIC13.53□□□□□ -0.24
Ssu72Q9CY97 Gm17271-201ENSMUST00000165535 355 ntBASIC13.53□□□□□ -0.24
Ssu72Q9CY97 Gm42839-201ENSMUST00000198978 525 ntTSL 2 BASIC13.53□□□□□ -0.24
Ssu72Q9CY97 Prok2-204ENSMUST00000203738 695 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Ssu72Q9CY97 Gm6916-202ENSMUST00000205523 195 ntBASIC13.53□□□□□ -0.24
Ssu72Q9CY97 Prss38-201ENSMUST00000061481 1243 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Ssu72Q9CY97 Olfr554-201ENSMUST00000098221 954 ntAPPRIS P1 BASIC13.53□□□□□ -0.24
Ssu72Q9CY97 Sh2b1-206ENSMUST00000205889 3011 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Ssu72Q9CY97 Vwf-202ENSMUST00000112253 2184 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Ssu72Q9CY97 Gm6018-201ENSMUST00000216090 1306 ntBASIC13.53□□□□□ -0.24
Ssu72Q9CY97 Coq10a-205ENSMUST00000220027 1307 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
Ssu72Q9CY97 Tmem37-201ENSMUST00000056089 1311 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Ssu72Q9CY97 AC122314.1-201ENSMUST00000223056 2239 ntBASIC13.53□□□□□ -0.24
Ssu72Q9CY97 Tmem116-203ENSMUST00000094357 1366 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
Ssu72Q9CY97 Anapc11-201ENSMUST00000026128 3229 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Ssu72Q9CY97 Fntb-206ENSMUST00000137826 1442 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
Ssu72Q9CY97 Gcsh-201ENSMUST00000040484 1443 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Ssu72Q9CY97 Adra1b-201ENSMUST00000067258 3331 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Ssu72Q9CY97 Tspan12-201ENSMUST00000031678 2490 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Ssu72Q9CY97 Naaladl1-201ENSMUST00000044451 2491 ntAPPRIS P1 TSL 2 BASIC13.53□□□□□ -0.24
Ssu72Q9CY97 Syt8-204ENSMUST00000118276 1503 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
Ssu72Q9CY97 Nap1l1-208ENSMUST00000219961 1512 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Ssu72Q9CY97 Ap3s1-201ENSMUST00000025357 1520 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Ssu72Q9CY97 Mrm3-201ENSMUST00000040577 1510 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Ssu72Q9CY97 Lamb2-201ENSMUST00000065014 5629 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Ssu72Q9CY97 Casc4-202ENSMUST00000089912 3602 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Ssu72Q9CY97 Spo11-202ENSMUST00000109125 1591 ntAPPRIS ALT1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Ssu72Q9CY97 Ptx4-201ENSMUST00000054930 1582 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Ssu72Q9CY97 Hdac5-203ENSMUST00000107151 4852 ntTSL 5 BASIC13.53□□□□□ -0.24
Ssu72Q9CY97 Naaa-202ENSMUST00000159345 1629 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Ssu72Q9CY97 Arrdc4-201ENSMUST00000048068 3905 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
Ssu72Q9CY97 Eef1d-206ENSMUST00000109975 2842 ntTSL 5 BASIC13.53□□□□□ -0.24
Ssu72Q9CY97 Itsn1-202ENSMUST00000064797 7418 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
Ssu72Q9CY97 Plekhb1-206ENSMUST00000107047 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Ssu72Q9CY97 Asl-202ENSMUST00000159619 2088 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 50.5 ms