Protein–RNA interactions for Protein: Q99PQ2

Trim11, E3 ubiquitin-protein ligase TRIM11, mousemouse

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim11Q99PQ2 Zfp169-203ENSMUST00000176176 2162 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Trim11Q99PQ2 Tjap1-203ENSMUST00000180283 2368 ntAPPRIS P2 TSL 5 BASIC15.56■□□□□ 0.08
Trim11Q99PQ2 Casp7-201ENSMUST00000026062 2350 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trim11Q99PQ2 Trim2-203ENSMUST00000107691 7428 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trim11Q99PQ2 Rnpc3-202ENSMUST00000106535 2616 ntAPPRIS ALT1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trim11Q99PQ2 Kcnd3-203ENSMUST00000118360 2668 ntAPPRIS P4 TSL 5 BASIC15.56■□□□□ 0.08
Trim11Q99PQ2 Spock1-205ENSMUST00000187852 3113 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Trim11Q99PQ2 Glud1-201ENSMUST00000022322 3390 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trim11Q99PQ2 Lpcat1-201ENSMUST00000022099 3675 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trim11Q99PQ2 Brinp1-201ENSMUST00000030036 3212 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trim11Q99PQ2 Pnkd-203ENSMUST00000087226 3054 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trim11Q99PQ2 Dok7-203ENSMUST00000114270 2779 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trim11Q99PQ2 Usf1-208ENSMUST00000161241 2167 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trim11Q99PQ2 Ephx2-201ENSMUST00000070515 2035 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trim11Q99PQ2 Hnrnph2-201ENSMUST00000050331 1701 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
Trim11Q99PQ2 Mutyh-201ENSMUST00000102699 1654 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trim11Q99PQ2 Cln3-203ENSMUST00000098036 1571 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trim11Q99PQ2 Paqr8-202ENSMUST00000167119 1472 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trim11Q99PQ2 Gm13859-201ENSMUST00000119936 1423 ntBASIC15.55■□□□□ 0.08
Trim11Q99PQ2 Enpp6-202ENSMUST00000119686 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trim11Q99PQ2 Tmem2-202ENSMUST00000096194 6667 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
Trim11Q99PQ2 Gm29374-201ENSMUST00000187198 1340 ntTSL 3 BASIC15.55■□□□□ 0.08
Trim11Q99PQ2 E130201H02Rik-201ENSMUST00000123576 851 ntBASIC15.55■□□□□ 0.08
Trim11Q99PQ2 Gm9063-201ENSMUST00000223299 582 ntBASIC15.55■□□□□ 0.08
Trim11Q99PQ2 Clps-201ENSMUST00000025062 550 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trim11Q99PQ2 Snrnp25-201ENSMUST00000039601 821 ntAPPRIS P2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trim11Q99PQ2 1600017P15Rik-201ENSMUST00000083427 412 ntBASIC15.55■□□□□ 0.08
Trim11Q99PQ2 Sim2-201ENSMUST00000072182 3670 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trim11Q99PQ2 Smc6-208ENSMUST00000218866 3373 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Trim11Q99PQ2 Zfp444-204ENSMUST00000108567 5104 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trim11Q99PQ2 Krt26-201ENSMUST00000100482 2471 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trim11Q99PQ2 Slc25a22-202ENSMUST00000106006 2277 ntTSL 5 BASIC15.55■□□□□ 0.08
Trim11Q99PQ2 Pus7-201ENSMUST00000119946 3407 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trim11Q99PQ2 Nfat5-201ENSMUST00000075922 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trim11Q99PQ2 Nfyc-201ENSMUST00000043429 1932 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trim11Q99PQ2 Mark2-201ENSMUST00000025921 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trim11Q99PQ2 Vangl1-201ENSMUST00000029453 6531 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trim11Q99PQ2 Trim15-203ENSMUST00000174195 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trim11Q99PQ2 CT025610.1-201ENSMUST00000224552 1786 ntBASIC15.54■□□□□ 0.08
Trim11Q99PQ2 Klhl32-204ENSMUST00000108218 7143 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
Trim11Q99PQ2 Abat-203ENSMUST00000115839 2414 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Trim11Q99PQ2 Heatr3-201ENSMUST00000034079 3251 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trim11Q99PQ2 Serhl-201ENSMUST00000078218 1371 ntAPPRIS P2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trim11Q99PQ2 Gm10327-201ENSMUST00000105222 1002 ntBASIC15.54■□□□□ 0.08
Trim11Q99PQ2 Mcfd2-202ENSMUST00000129616 813 ntAPPRIS P1 TSL 3 BASIC15.54■□□□□ 0.08
Trim11Q99PQ2 Gm5069-202ENSMUST00000192714 1011 ntBASIC15.54■□□□□ 0.08
Trim11Q99PQ2 Gm7775-201ENSMUST00000218871 853 ntBASIC15.54■□□□□ 0.08
Trim11Q99PQ2 4930408O17Rik-202ENSMUST00000222624 1131 ntTSL 5 BASIC15.54■□□□□ 0.08
Trim11Q99PQ2 AC126408.1-201ENSMUST00000225184 523 ntBASIC15.54■□□□□ 0.08
Trim11Q99PQ2 Tex12-201ENSMUST00000034568 895 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trim11Q99PQ2 Lce1c-201ENSMUST00000047055 724 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trim11Q99PQ2 Myef2-207ENSMUST00000147105 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trim11Q99PQ2 Got1-201ENSMUST00000026196 2058 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trim11Q99PQ2 Iffo2-202ENSMUST00000123827 2036 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trim11Q99PQ2 Lca5-202ENSMUST00000034793 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trim11Q99PQ2 Gm26525-201ENSMUST00000180666 3616 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Trim11Q99PQ2 Gm26867-201ENSMUST00000180963 3615 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Trim11Q99PQ2 Acsl6-210ENSMUST00000108905 5807 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Trim11Q99PQ2 Tbkbp1-205ENSMUST00000118375 3288 ntAPPRIS P2 TSL 5 BASIC15.54■□□□□ 0.08
Trim11Q99PQ2 Rbm47-206ENSMUST00000200775 3180 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trim11Q99PQ2 Hipk4-202ENSMUST00000108353 2409 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trim11Q99PQ2 Mpv17-201ENSMUST00000154241 1724 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trim11Q99PQ2 Smg5-201ENSMUST00000001451 4448 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trim11Q99PQ2 Fbxl12-207ENSMUST00000151861 1668 ntTSL 2 BASIC15.54■□□□□ 0.08
Trim11Q99PQ2 Sema6c-201ENSMUST00000090821 3933 ntAPPRIS P3 TSL 5 BASIC15.53■□□□□ 0.08
Trim11Q99PQ2 Proser1-201ENSMUST00000058577 4472 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Trim11Q99PQ2 Cyp4x1os-201ENSMUST00000153951 2003 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Trim11Q99PQ2 Eef1e1-201ENSMUST00000001757 2553 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Trim11Q99PQ2 Eif3j1-201ENSMUST00000028668 5413 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Trim11Q99PQ2 Suv39h1-203ENSMUST00000115638 3116 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Trim11Q99PQ2 Gm2115-201ENSMUST00000180387 7055 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Trim11Q99PQ2 Unc5b-203ENSMUST00000218637 3653 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Trim11Q99PQ2 H3f3b-202ENSMUST00000106454 2514 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
Trim11Q99PQ2 Taco1-201ENSMUST00000002048 1383 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Trim11Q99PQ2 D430041D05Rik-201ENSMUST00000089726 10124 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
Trim11Q99PQ2 Myh7-201ENSMUST00000102803 6135 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Trim11Q99PQ2 Golim4-208ENSMUST00000167078 2902 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
Trim11Q99PQ2 AC159621.2-201ENSMUST00000223519 1326 ntBASIC15.53■□□□□ 0.08
Trim11Q99PQ2 Arfgap1-205ENSMUST00000108862 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Trim11Q99PQ2 Trappc6a-202ENSMUST00000108455 651 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Trim11Q99PQ2 Cryba4-202ENSMUST00000112383 754 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Trim11Q99PQ2 Gm15706-201ENSMUST00000139612 899 ntTSL 2 BASIC15.53■□□□□ 0.08
Trim11Q99PQ2 Gm15948-201ENSMUST00000150616 403 ntTSL 3 BASIC15.53■□□□□ 0.08
Trim11Q99PQ2 Fbxw4-209ENSMUST00000162433 789 ntTSL 3 BASIC15.53■□□□□ 0.08
Trim11Q99PQ2 Cxcl17-202ENSMUST00000200880 760 ntAPPRIS P2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Trim11Q99PQ2 4930593C16Rik-202ENSMUST00000214011 714 ntTSL 5 BASIC15.53■□□□□ 0.08
Trim11Q99PQ2 AI463170-204ENSMUST00000220157 447 ntTSL 3 BASIC15.53■□□□□ 0.08
Trim11Q99PQ2 AC139382.1-201ENSMUST00000221402 498 ntBASIC15.53■□□□□ 0.08
Trim11Q99PQ2 Prtn3-201ENSMUST00000006679 1025 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Trim11Q99PQ2 Cxcl17-201ENSMUST00000074040 761 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
Trim11Q99PQ2 Anks1b-231ENSMUST00000183136 2786 ntTSL 5 BASIC15.53■□□□□ 0.08
Trim11Q99PQ2 Pla2g4c-204ENSMUST00000167232 2154 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
Trim11Q99PQ2 Tmem51os1-204ENSMUST00000153023 3440 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Trim11Q99PQ2 Yipf6-201ENSMUST00000054697 5211 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Trim11Q99PQ2 Umad1-204ENSMUST00000159433 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Trim11Q99PQ2 AC139350.1-201ENSMUST00000227064 1594 ntBASIC15.53■□□□□ 0.08
Trim11Q99PQ2 Mob1a-202ENSMUST00000055261 4412 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Trim11Q99PQ2 Rpl21-201ENSMUST00000035983 1856 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Trim11Q99PQ2 Gm28230-201ENSMUST00000053932 3527 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Trim11Q99PQ2 Lcmt1-201ENSMUST00000033025 1369 ntAPPRIS P2 TSL 1 (best) BASIC15.52■□□□□ 0.08
Retrieved 100 of 76,532 protein–RNA pairs in 36 ms