Protein–RNA interactions for Protein: Q99JW4

Lims1, LIM and senescent cell antigen-like-containing domain protein 1, mousemouse

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lims1Q99JW4 Gm11505-201ENSMUST00000130442 737 ntTSL 3 BASIC12.45□□□□□ -0.42
Lims1Q99JW4 Khdc3-202ENSMUST00000167514 1251 ntAPPRIS ALT2 TSL 5 BASIC12.45□□□□□ -0.42
Lims1Q99JW4 Gm7030-203ENSMUST00000173322 913 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Lims1Q99JW4 Hsf4-207ENSMUST00000174837 1251 ntTSL 5 BASIC12.45□□□□□ -0.42
Lims1Q99JW4 Gm37171-201ENSMUST00000192636 1185 ntBASIC12.45□□□□□ -0.42
Lims1Q99JW4 Gm34397-203ENSMUST00000214991 630 ntTSL 5 BASIC12.45□□□□□ -0.42
Lims1Q99JW4 Gm7030-201ENSMUST00000046131 913 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
Lims1Q99JW4 Gm8396-201ENSMUST00000057361 823 ntBASIC12.45□□□□□ -0.42
Lims1Q99JW4 Net1-201ENSMUST00000091853 2680 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
Lims1Q99JW4 Cmpk2-201ENSMUST00000020969 3200 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Lims1Q99JW4 Rnf144a-201ENSMUST00000020971 5164 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Lims1Q99JW4 Bak1-202ENSMUST00000078691 2387 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Lims1Q99JW4 Sh3bp2-207ENSMUST00000179943 2935 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
Lims1Q99JW4 Zfyve19-202ENSMUST00000102519 1505 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Lims1Q99JW4 Kpnb1-201ENSMUST00000001479 5894 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Lims1Q99JW4 Kcnf1-201ENSMUST00000170580 4789 ntAPPRIS P1 BASIC12.45□□□□□ -0.42
Lims1Q99JW4 Kmt5b-206ENSMUST00000113973 6130 ntAPPRIS ALT2 TSL 5 BASIC12.45□□□□□ -0.42
Lims1Q99JW4 Ube3a-216ENSMUST00000202945 3889 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Lims1Q99JW4 Sbk1-201ENSMUST00000056028 4109 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Lims1Q99JW4 Hvcn1-201ENSMUST00000072602 2790 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Lims1Q99JW4 Mfsd14b-201ENSMUST00000054730 3251 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
Lims1Q99JW4 Kcnn2-205ENSMUST00000183850 3546 ntAPPRIS P2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Lims1Q99JW4 Hnrnpk-232ENSMUST00000225674 2704 ntBASIC12.45□□□□□ -0.42
Lims1Q99JW4 Mos-201ENSMUST00000105158 1449 ntAPPRIS P1 BASIC12.45□□□□□ -0.42
Lims1Q99JW4 Dnmt3l-208ENSMUST00000151242 1657 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Lims1Q99JW4 1810014B01Rik-201ENSMUST00000181587 1661 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Lims1Q99JW4 Olfr718-ps1-202ENSMUST00000213631 4737 ntAPPRIS P5 TSL 5 BASIC12.45□□□□□ -0.42
Lims1Q99JW4 Gm29455-201ENSMUST00000186504 2659 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Lims1Q99JW4 Sim2-201ENSMUST00000072182 3670 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Lims1Q99JW4 Sema6c-201ENSMUST00000090821 3933 ntAPPRIS P3 TSL 5 BASIC12.44□□□□□ -0.42
Lims1Q99JW4 Ylpm1-207ENSMUST00000168977 4893 ntAPPRIS ALT2 TSL 5 BASIC12.44□□□□□ -0.42
Lims1Q99JW4 Cdh11-201ENSMUST00000075190 5647 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Lims1Q99JW4 Nek7-202ENSMUST00000186017 5258 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Lims1Q99JW4 Zfp207-206ENSMUST00000165565 2311 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Lims1Q99JW4 Clcnka-202ENSMUST00000105790 2511 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Lims1Q99JW4 2310007B03Rik-201ENSMUST00000043718 2299 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Lims1Q99JW4 Usp18-201ENSMUST00000032198 1771 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Lims1Q99JW4 Appl1-201ENSMUST00000036570 7642 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Lims1Q99JW4 Ccdc106-201ENSMUST00000045543 1534 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Lims1Q99JW4 Sugp2-214ENSMUST00000164403 4099 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Lims1Q99JW4 Grk6-203ENSMUST00000224118 1997 ntAPPRIS ALT2 BASIC12.44□□□□□ -0.42
Lims1Q99JW4 Metrnl-202ENSMUST00000106089 1101 ntAPPRIS ALT2 TSL 5 BASIC12.44□□□□□ -0.42
Lims1Q99JW4 Hras-203ENSMUST00000124314 1073 ntTSL 5 BASIC12.44□□□□□ -0.42
Lims1Q99JW4 Gm11723-201ENSMUST00000155505 466 ntTSL 3 BASIC12.44□□□□□ -0.42
Lims1Q99JW4 Gm10253-201ENSMUST00000194270 940 ntBASIC12.44□□□□□ -0.42
Lims1Q99JW4 Gm44662-201ENSMUST00000206970 412 ntTSL 5 BASIC12.44□□□□□ -0.42
Lims1Q99JW4 Gm5779-201ENSMUST00000218467 910 ntBASIC12.44□□□□□ -0.42
Lims1Q99JW4 AC159114.1-201ENSMUST00000220349 266 ntBASIC12.44□□□□□ -0.42
Lims1Q99JW4 Gdpd3-201ENSMUST00000032944 1148 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Lims1Q99JW4 Hist1h2aa-201ENSMUST00000072391 390 ntAPPRIS P1 BASIC12.44□□□□□ -0.42
Lims1Q99JW4 Alox12e-201ENSMUST00000019051 2422 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Lims1Q99JW4 Ablim2-201ENSMUST00000054598 3564 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
Lims1Q99JW4 Map10-201ENSMUST00000053078 3542 ntAPPRIS P1 BASIC12.44□□□□□ -0.42
Lims1Q99JW4 Tpgs2-201ENSMUST00000115817 4159 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
Lims1Q99JW4 Rreb1-202ENSMUST00000110237 4617 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Lims1Q99JW4 Pdpk1-204ENSMUST00000115409 4623 ntTSL 5 BASIC12.44□□□□□ -0.42
Lims1Q99JW4 Ccser2-202ENSMUST00000090024 7509 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Lims1Q99JW4 Dnpep-209ENSMUST00000187836 1862 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
Lims1Q99JW4 Myadm-203ENSMUST00000203328 1899 ntAPPRIS P1 TSL 2 BASIC12.44□□□□□ -0.42
Lims1Q99JW4 4732471J01Rik-203ENSMUST00000206300 1887 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Lims1Q99JW4 Zkscan17-201ENSMUST00000013262 4064 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Lims1Q99JW4 Olfml2a-201ENSMUST00000057279 5579 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Lims1Q99JW4 Naaa-202ENSMUST00000159345 1629 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Lims1Q99JW4 Stxbp2-207ENSMUST00000160708 2908 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Lims1Q99JW4 2610001J05Rik-203ENSMUST00000185219 1606 ntAPPRIS P1 BASIC12.44□□□□□ -0.42
Lims1Q99JW4 9930014A18Rik-201ENSMUST00000180730 3074 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Lims1Q99JW4 D6Ertd527e-203ENSMUST00000203747 2216 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
Lims1Q99JW4 Pard3-222ENSMUST00000162536 5175 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
Lims1Q99JW4 Ddb2-201ENSMUST00000028696 1557 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Lims1Q99JW4 Add2-202ENSMUST00000203196 1970 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Lims1Q99JW4 Col2a1-202ENSMUST00000088355 4862 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Lims1Q99JW4 Il1r1-202ENSMUST00000114795 4832 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Lims1Q99JW4 Mpp3-202ENSMUST00000100400 2997 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Lims1Q99JW4 Necab1-202ENSMUST00000108273 2135 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Lims1Q99JW4 Foxp2-207ENSMUST00000115477 6760 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
Lims1Q99JW4 P2rx6-201ENSMUST00000023441 2345 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Lims1Q99JW4 Sema4a-213ENSMUST00000165898 3125 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
Lims1Q99JW4 Fbxo3-201ENSMUST00000028603 4740 ntAPPRIS P4 TSL 1 (best) BASIC12.43□□□□□ -0.42
Lims1Q99JW4 Cnst-201ENSMUST00000040706 4709 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Lims1Q99JW4 Tspan12-201ENSMUST00000031678 2490 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Lims1Q99JW4 Hdgfl2-201ENSMUST00000002911 2264 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Lims1Q99JW4 Smyd1-203ENSMUST00000114188 2064 ntTSL 5 BASIC12.43□□□□□ -0.42
Lims1Q99JW4 Prg4-207ENSMUST00000162367 1480 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Lims1Q99JW4 Tnfrsf13b-202ENSMUST00000101103 750 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Lims1Q99JW4 Wdr38-202ENSMUST00000112872 1194 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Lims1Q99JW4 Gm15653-201ENSMUST00000119247 907 ntBASIC12.43□□□□□ -0.42
Lims1Q99JW4 E130201H02Rik-201ENSMUST00000123576 851 ntBASIC12.43□□□□□ -0.42
Lims1Q99JW4 Gm6283-201ENSMUST00000182369 1000 ntBASIC12.43□□□□□ -0.42
Lims1Q99JW4 1700025N23Rik-201ENSMUST00000186189 915 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Lims1Q99JW4 Ighv8-8-201ENSMUST00000192591 358 ntAPPRIS P1 BASIC12.43□□□□□ -0.42
Lims1Q99JW4 Gm40123-201ENSMUST00000198175 1027 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Lims1Q99JW4 Tmem129-204ENSMUST00000200849 657 ntTSL 3 BASIC12.43□□□□□ -0.42
Lims1Q99JW4 AC158804.1-201ENSMUST00000219046 541 ntTSL 3 BASIC12.43□□□□□ -0.42
Lims1Q99JW4 3110079O15Rik-201ENSMUST00000027476 478 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Lims1Q99JW4 Rad23b-201ENSMUST00000030134 3810 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Lims1Q99JW4 Erp27-201ENSMUST00000032343 1029 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Lims1Q99JW4 Haus7-202ENSMUST00000077243 1032 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Lims1Q99JW4 Arhgef37-201ENSMUST00000171629 3234 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
Lims1Q99JW4 Celf5-203ENSMUST00000120508 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Lims1Q99JW4 Azi2-201ENSMUST00000044454 3396 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 30.6 ms