Protein–RNA interactions for Protein: Q8R1M2

H2afj, Histone H2A.J, mousemouse

Predictions only

Length 129 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afjQ8R1M2 Zyx-202ENSMUST00000164375 3188 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
H2afjQ8R1M2 Dcun1d3-203ENSMUST00000106519 1475 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
H2afjQ8R1M2 Aspg-201ENSMUST00000079400 2722 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
H2afjQ8R1M2 Psrc1-202ENSMUST00000102629 1687 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
H2afjQ8R1M2 2810429I04Rik-203ENSMUST00000181708 4769 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
H2afjQ8R1M2 Tpk1-201ENSMUST00000067888 2671 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
H2afjQ8R1M2 Ccdc88c-201ENSMUST00000068411 7542 ntAPPRIS P2 TSL 1 (best) BASIC12.69□□□□□ -0.38
H2afjQ8R1M2 Scara5-201ENSMUST00000022610 3794 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
H2afjQ8R1M2 Serpinb2-201ENSMUST00000009356 1970 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
H2afjQ8R1M2 Senp5-201ENSMUST00000023457 3498 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
H2afjQ8R1M2 Agrn-201ENSMUST00000071248 4831 ntTSL 5 BASIC12.68□□□□□ -0.38
H2afjQ8R1M2 Gpr4-201ENSMUST00000060225 2882 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
H2afjQ8R1M2 Gtf3c5-202ENSMUST00000113889 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
H2afjQ8R1M2 Arxes2-201ENSMUST00000058119 1532 ntAPPRIS P1 BASIC12.68□□□□□ -0.38
H2afjQ8R1M2 Taf1c-201ENSMUST00000093099 3236 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
H2afjQ8R1M2 Tmub1-201ENSMUST00000030799 1333 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
H2afjQ8R1M2 Abcc5-202ENSMUST00000079158 5811 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
H2afjQ8R1M2 Pitpnm3-201ENSMUST00000075258 6555 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
H2afjQ8R1M2 Efhd1-201ENSMUST00000027472 1854 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
H2afjQ8R1M2 Hipk4-202ENSMUST00000108353 2409 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
H2afjQ8R1M2 Cul9-201ENSMUST00000066026 7818 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
H2afjQ8R1M2 Gm12404-201ENSMUST00000122839 1661 ntTSL 5 BASIC12.68□□□□□ -0.38
H2afjQ8R1M2 Adam22-203ENSMUST00000088744 9245 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
H2afjQ8R1M2 Cldn14-204ENSMUST00000169391 1456 ntAPPRIS P1 TSL 2 BASIC12.68□□□□□ -0.38
H2afjQ8R1M2 Kctd11-201ENSMUST00000050555 3146 ntAPPRIS P1 BASIC12.68□□□□□ -0.38
H2afjQ8R1M2 Park7-205ENSMUST00000105676 582 ntTSL 5 BASIC12.68□□□□□ -0.38
H2afjQ8R1M2 Gm4995-201ENSMUST00000117247 432 ntBASIC12.68□□□□□ -0.38
H2afjQ8R1M2 Gm11788-201ENSMUST00000142520 562 ntTSL 3 BASIC12.68□□□□□ -0.38
H2afjQ8R1M2 Gm16091-201ENSMUST00000156664 963 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
H2afjQ8R1M2 Hsd17b14-205ENSMUST00000210300 797 ntTSL 5 BASIC12.68□□□□□ -0.38
H2afjQ8R1M2 Gm45453-201ENSMUST00000211758 853 ntBASIC12.68□□□□□ -0.38
H2afjQ8R1M2 Gm34397-203ENSMUST00000214991 630 ntTSL 5 BASIC12.68□□□□□ -0.38
H2afjQ8R1M2 Ftl1-ps1-202ENSMUST00000222435 938 ntAPPRIS P1 BASIC12.68□□□□□ -0.38
H2afjQ8R1M2 Lce1b-201ENSMUST00000029531 647 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
H2afjQ8R1M2 Pecr-202ENSMUST00000097698 932 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
H2afjQ8R1M2 Fbxl19-202ENSMUST00000186116 3641 ntTSL 5 BASIC12.68□□□□□ -0.38
H2afjQ8R1M2 AW822073-202ENSMUST00000204003 1959 ntAPPRIS P1 BASIC12.68□□□□□ -0.38
H2afjQ8R1M2 Prn-201ENSMUST00000124100 2132 ntAPPRIS P1 TSL 2 BASIC12.68□□□□□ -0.38
H2afjQ8R1M2 Igfals-201ENSMUST00000050714 2111 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
H2afjQ8R1M2 Gpr132-201ENSMUST00000021729 2478 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
H2afjQ8R1M2 Eps8l1-214ENSMUST00000171445 2975 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
H2afjQ8R1M2 Ace3-201ENSMUST00000190995 2214 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
H2afjQ8R1M2 Hk1-202ENSMUST00000099691 4278 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
H2afjQ8R1M2 Dnmt3a-201ENSMUST00000020991 9685 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
H2afjQ8R1M2 Klhl8-203ENSMUST00000112815 2898 ntTSL 5 BASIC12.67□□□□□ -0.38
H2afjQ8R1M2 Ntrk2-204ENSMUST00000224259 3049 ntBASIC12.67□□□□□ -0.38
H2afjQ8R1M2 Cpne1-201ENSMUST00000079312 1683 ntTSL 5 BASIC12.67□□□□□ -0.38
H2afjQ8R1M2 Fip1l1-201ENSMUST00000080164 4673 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
H2afjQ8R1M2 Asph-202ENSMUST00000078139 6694 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
H2afjQ8R1M2 Asb10-201ENSMUST00000048302 2327 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
H2afjQ8R1M2 Arhgap11a-201ENSMUST00000102545 4958 ntAPPRIS P2 TSL 5 BASIC12.67□□□□□ -0.38
H2afjQ8R1M2 Btrc-201ENSMUST00000065601 2978 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
H2afjQ8R1M2 Gpc2-205ENSMUST00000161827 2586 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
H2afjQ8R1M2 Tmem253-201ENSMUST00000100638 1234 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
H2afjQ8R1M2 Hist3h2bb-ps-201ENSMUST00000117558 465 ntBASIC12.67□□□□□ -0.38
H2afjQ8R1M2 Gm13015-201ENSMUST00000118674 204 ntBASIC12.67□□□□□ -0.38
H2afjQ8R1M2 Gm15701-201ENSMUST00000129559 573 ntTSL 3 BASIC12.67□□□□□ -0.38
H2afjQ8R1M2 Gm11505-201ENSMUST00000130442 737 ntTSL 3 BASIC12.67□□□□□ -0.38
H2afjQ8R1M2 Ankrd13d-204ENSMUST00000167215 639 ntTSL 3 BASIC12.67□□□□□ -0.38
H2afjQ8R1M2 2810047C21Rik1-201ENSMUST00000172930 915 ntBASIC12.67□□□□□ -0.38
H2afjQ8R1M2 Gm27631-201ENSMUST00000184163 466 ntBASIC12.67□□□□□ -0.38
H2afjQ8R1M2 Gm43073-201ENSMUST00000198200 1189 ntBASIC12.67□□□□□ -0.38
H2afjQ8R1M2 Gm45208-202ENSMUST00000208156 1153 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
H2afjQ8R1M2 Wdr45-225ENSMUST00000208443 1172 ntTSL 5 BASIC12.67□□□□□ -0.38
H2afjQ8R1M2 Gm40493-201ENSMUST00000210223 400 ntTSL 3 BASIC12.67□□□□□ -0.38
H2afjQ8R1M2 AC139350.3-201ENSMUST00000226151 420 ntBASIC12.67□□□□□ -0.38
H2afjQ8R1M2 Oxt-201ENSMUST00000028764 537 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
H2afjQ8R1M2 Mir125a-201ENSMUST00000083545 68 ntBASIC12.67□□□□□ -0.38
H2afjQ8R1M2 Tbx4-201ENSMUST00000000096 3011 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
H2afjQ8R1M2 Sema3f-204ENSMUST00000192727 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
H2afjQ8R1M2 Galt-201ENSMUST00000084695 1595 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
H2afjQ8R1M2 Edrf1-202ENSMUST00000128901 4380 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
H2afjQ8R1M2 Dgcr8-202ENSMUST00000115633 4522 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
H2afjQ8R1M2 Tln1-201ENSMUST00000030187 8393 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
H2afjQ8R1M2 Pnkd-203ENSMUST00000087226 3054 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
H2afjQ8R1M2 Nbeal2-211ENSMUST00000196488 8599 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
H2afjQ8R1M2 Gtf2i-206ENSMUST00000172715 4114 ntTSL 5 BASIC12.67□□□□□ -0.38
H2afjQ8R1M2 Tppp3-203ENSMUST00000177126 1396 ntAPPRIS P1 TSL 3 BASIC12.67□□□□□ -0.38
H2afjQ8R1M2 BC001981-202ENSMUST00000191393 1545 ntBASIC12.67□□□□□ -0.38
H2afjQ8R1M2 Slc9a3r2-202ENSMUST00000019684 1688 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
H2afjQ8R1M2 Ssr1-203ENSMUST00000225246 1825 ntBASIC12.67□□□□□ -0.38
H2afjQ8R1M2 Fuca2-203ENSMUST00000121465 5741 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
H2afjQ8R1M2 Myh3-202ENSMUST00000108689 6031 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
H2afjQ8R1M2 Ticrr-201ENSMUST00000035977 7199 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
H2afjQ8R1M2 Arhgap35-202ENSMUST00000171937 6251 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
H2afjQ8R1M2 Tbkbp1-205ENSMUST00000118375 3288 ntAPPRIS P2 TSL 5 BASIC12.66□□□□□ -0.38
H2afjQ8R1M2 Dcaf11-204ENSMUST00000121622 2379 ntAPPRIS P2 TSL 5 BASIC12.66□□□□□ -0.38
H2afjQ8R1M2 Stpg2-202ENSMUST00000106239 2055 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
H2afjQ8R1M2 Il18r1-203ENSMUST00000167723 1919 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
H2afjQ8R1M2 Bcl9l-201ENSMUST00000074989 5339 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
H2afjQ8R1M2 Gbf1-201ENSMUST00000026254 6450 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
H2afjQ8R1M2 Ptbp2-201ENSMUST00000029780 3364 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
H2afjQ8R1M2 Nfatc2ip-201ENSMUST00000075671 3388 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
H2afjQ8R1M2 Plcb1-202ENSMUST00000110116 7003 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
H2afjQ8R1M2 Cops7b-202ENSMUST00000121534 5383 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
H2afjQ8R1M2 Paf1-201ENSMUST00000003529 2003 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
H2afjQ8R1M2 Alg2-201ENSMUST00000044148 3021 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
H2afjQ8R1M2 Ppp4r3b-202ENSMUST00000102856 2410 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
H2afjQ8R1M2 Troap-201ENSMUST00000039665 2264 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
H2afjQ8R1M2 Igf2-203ENSMUST00000105935 650 ntAPPRIS P1 TSL 3 BASIC12.66□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 35.3 ms