Protein–RNA interactions for Protein: Q8R0S1

Atf7, Cyclic AMP-dependent transcription factor ATF-7, mousemouse

Predictions only

Length 413 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atf7Q8R0S1 Mks1-201ENSMUST00000038196 2499 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Atf7Q8R0S1 Lrp10-201ENSMUST00000022782 4228 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Atf7Q8R0S1 Gm8775-201ENSMUST00000170943 1327 ntBASIC16.11■□□□□ 0.17
Atf7Q8R0S1 Olfr61-202ENSMUST00000210241 1348 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
Atf7Q8R0S1 Fhad1-201ENSMUST00000036701 1366 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Atf7Q8R0S1 B3gat1-204ENSMUST00000160899 3801 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Atf7Q8R0S1 Epb41l2-201ENSMUST00000053748 4385 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Atf7Q8R0S1 Gucy2e-202ENSMUST00000108664 4415 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
Atf7Q8R0S1 Chp2-201ENSMUST00000033152 1456 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Atf7Q8R0S1 Tnk1-203ENSMUST00000108628 2450 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
Atf7Q8R0S1 Gm28386-201ENSMUST00000189147 1849 ntBASIC16.1■□□□□ 0.17
Atf7Q8R0S1 Mei4-202ENSMUST00000189391 1817 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Atf7Q8R0S1 Atp9b-213ENSMUST00000225980 5150 ntAPPRIS P2 BASIC16.1■□□□□ 0.17
Atf7Q8R0S1 Gm26777-201ENSMUST00000181852 2573 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Atf7Q8R0S1 Stxbp1-202ENSMUST00000077458 3616 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Atf7Q8R0S1 Ntrk2-209ENSMUST00000225950 2640 ntBASIC16.1■□□□□ 0.17
Atf7Q8R0S1 Naa30-201ENSMUST00000037362 4464 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
Atf7Q8R0S1 Gm5124-201ENSMUST00000127554 1970 ntTSL 5 BASIC16.1■□□□□ 0.17
Atf7Q8R0S1 Dao-203ENSMUST00000161610 1633 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Atf7Q8R0S1 Nedd8-201ENSMUST00000010520 824 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Atf7Q8R0S1 Gm45799-201ENSMUST00000106785 367 ntAPPRIS ALT2 TSL 3 BASIC16.1■□□□□ 0.17
Atf7Q8R0S1 Adprm-201ENSMUST00000116363 1283 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Atf7Q8R0S1 Pdpn-202ENSMUST00000119654 762 ntAPPRIS ALT2 TSL 3 BASIC16.1■□□□□ 0.17
Atf7Q8R0S1 Gm14730-201ENSMUST00000122378 1045 ntBASIC16.1■□□□□ 0.17
Atf7Q8R0S1 Gm25925-201ENSMUST00000158314 306 ntBASIC16.1■□□□□ 0.17
Atf7Q8R0S1 Gm7498-201ENSMUST00000203282 1084 ntBASIC16.1■□□□□ 0.17
Atf7Q8R0S1 Mcee-203ENSMUST00000206194 532 ntTSL 2 BASIC16.1■□□□□ 0.17
Atf7Q8R0S1 Aprt-209ENSMUST00000213062 560 ntTSL 2 BASIC16.1■□□□□ 0.17
Atf7Q8R0S1 Tmem179-202ENSMUST00000222836 521 ntTSL 5 BASIC16.1■□□□□ 0.17
Atf7Q8R0S1 Taldo1-201ENSMUST00000026576 1229 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Atf7Q8R0S1 1700018B08Rik-201ENSMUST00000034265 1084 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Atf7Q8R0S1 Bcl2l1-201ENSMUST00000007803 2417 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Atf7Q8R0S1 Sema4b-201ENSMUST00000032754 3949 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Atf7Q8R0S1 Snrpa-202ENSMUST00000122202 1336 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Atf7Q8R0S1 Syt7-204ENSMUST00000223586 1344 ntBASIC16.1■□□□□ 0.17
Atf7Q8R0S1 Gad1-205ENSMUST00000130998 1705 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Atf7Q8R0S1 Srrm1-203ENSMUST00000105861 3797 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
Atf7Q8R0S1 Celf4-207ENSMUST00000225477 2626 ntAPPRIS P3 BASIC16.1■□□□□ 0.17
Atf7Q8R0S1 Mfsd4b4-202ENSMUST00000178563 3523 ntTSL 5 BASIC16.1■□□□□ 0.17
Atf7Q8R0S1 Slc8a2-202ENSMUST00000211649 5261 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
Atf7Q8R0S1 Lrrc29-201ENSMUST00000070508 1922 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Atf7Q8R0S1 Specc1-202ENSMUST00000092415 6797 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
Atf7Q8R0S1 Ccser2-202ENSMUST00000090024 7509 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Atf7Q8R0S1 Cpne4-201ENSMUST00000057742 3959 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Atf7Q8R0S1 Fam160a2-204ENSMUST00000122327 3521 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
Atf7Q8R0S1 Usf1-208ENSMUST00000161241 2167 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Atf7Q8R0S1 Lipe-202ENSMUST00000054301 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Atf7Q8R0S1 Maged2-201ENSMUST00000026302 2207 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
Atf7Q8R0S1 Rab18-201ENSMUST00000097680 2257 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Atf7Q8R0S1 Mif4gd-202ENSMUST00000106506 993 ntTSL 3 BASIC16.09■□□□□ 0.17
Atf7Q8R0S1 Gm11773-201ENSMUST00000138256 497 ntTSL 2 BASIC16.09■□□□□ 0.17
Atf7Q8R0S1 Gm20646-202ENSMUST00000199521 660 ntTSL 3 BASIC16.09■□□□□ 0.17
Atf7Q8R0S1 Gm20949-201ENSMUST00000206478 952 ntBASIC16.09■□□□□ 0.17
Atf7Q8R0S1 0610005C13Rik-202ENSMUST00000209510 671 ntTSL 3 BASIC16.09■□□□□ 0.17
Atf7Q8R0S1 Wdyhv1-203ENSMUST00000226889 394 ntBASIC16.09■□□□□ 0.17
Atf7Q8R0S1 Traf1-202ENSMUST00000113064 2325 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Atf7Q8R0S1 Hspb8-201ENSMUST00000036991 1816 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Atf7Q8R0S1 Sema3f-204ENSMUST00000192727 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Atf7Q8R0S1 Catsper3-202ENSMUST00000109898 1311 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
Atf7Q8R0S1 Tmem163-205ENSMUST00000185560 3488 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Atf7Q8R0S1 Foxred2-201ENSMUST00000016696 4793 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Atf7Q8R0S1 Tbc1d5-205ENSMUST00000224528 4764 ntAPPRIS ALT2 BASIC16.09■□□□□ 0.17
Atf7Q8R0S1 Tjap1-202ENSMUST00000164342 2559 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Atf7Q8R0S1 Zfp146-201ENSMUST00000062181 2029 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Atf7Q8R0S1 Gsg1l-201ENSMUST00000073935 3923 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Atf7Q8R0S1 Mgat1-202ENSMUST00000101293 2729 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Atf7Q8R0S1 Dlk2-201ENSMUST00000061722 1532 ntTSL 5 BASIC16.09■□□□□ 0.17
Atf7Q8R0S1 Iffo2-201ENSMUST00000040023 5227 ntAPPRIS P3 TSL 5 BASIC16.09■□□□□ 0.17
Atf7Q8R0S1 Tmem51os1-204ENSMUST00000153023 3440 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Atf7Q8R0S1 Zbtb4-202ENSMUST00000108639 7811 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Atf7Q8R0S1 Psmd11-201ENSMUST00000017572 2848 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Atf7Q8R0S1 Bpifa6-201ENSMUST00000109753 1572 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Atf7Q8R0S1 C330018A13Rik-201ENSMUST00000127792 1599 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Atf7Q8R0S1 Dnmt3b-209ENSMUST00000109773 4148 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Atf7Q8R0S1 R3hdm2-212ENSMUST00000166820 4281 ntAPPRIS P2 TSL 5 BASIC16.08■□□□□ 0.17
Atf7Q8R0S1 Ccno-201ENSMUST00000038404 1875 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Atf7Q8R0S1 Rcsd1-201ENSMUST00000040357 2622 ntAPPRIS P4 TSL 1 (best) BASIC16.08■□□□□ 0.17
Atf7Q8R0S1 Kcnd3-203ENSMUST00000118360 2668 ntAPPRIS P4 TSL 5 BASIC16.08■□□□□ 0.16
Atf7Q8R0S1 Trim27-206ENSMUST00000222544 4312 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.16
Atf7Q8R0S1 Srrm1-202ENSMUST00000084846 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
Atf7Q8R0S1 Snap47-202ENSMUST00000120940 1192 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
Atf7Q8R0S1 Pam16-201ENSMUST00000014445 596 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Atf7Q8R0S1 Tmem33-206ENSMUST00000162543 664 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Atf7Q8R0S1 Gm5279-201ENSMUST00000199575 745 ntBASIC16.08■□□□□ 0.16
Atf7Q8R0S1 Gm40193-201ENSMUST00000209971 237 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.16
Atf7Q8R0S1 Gm31105-201ENSMUST00000211421 687 ntTSL 2 BASIC16.08■□□□□ 0.16
Atf7Q8R0S1 Slc22a2-201ENSMUST00000046959 2115 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Atf7Q8R0S1 Olfr1412-201ENSMUST00000062964 966 ntAPPRIS P1 BASIC16.08■□□□□ 0.16
Atf7Q8R0S1 Olfr615-201ENSMUST00000098198 942 ntAPPRIS P1 BASIC16.08■□□□□ 0.16
Atf7Q8R0S1 Tmem8b-202ENSMUST00000107865 4775 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Atf7Q8R0S1 Zfp169-203ENSMUST00000176176 2162 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Atf7Q8R0S1 Wwox-201ENSMUST00000004756 2244 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Atf7Q8R0S1 Smc6-208ENSMUST00000218866 3373 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Atf7Q8R0S1 Alx1-201ENSMUST00000040859 2493 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Atf7Q8R0S1 Car3-201ENSMUST00000029076 1679 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Atf7Q8R0S1 Arap1-204ENSMUST00000107010 5147 ntAPPRIS P2 TSL 1 (best) BASIC16.08■□□□□ 0.16
Atf7Q8R0S1 Dock4-201ENSMUST00000037488 8552 ntAPPRIS P2 TSL 1 (best) BASIC16.08■□□□□ 0.16
Atf7Q8R0S1 Gm29358-201ENSMUST00000186510 1734 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Atf7Q8R0S1 Col3a1-201ENSMUST00000087883 5564 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Atf7Q8R0S1 Spock1-205ENSMUST00000187852 3113 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Retrieved 100 of 76,532 protein–RNA pairs in 37.7 ms