Protein–RNA interactions for Protein: Q8K2Z2

Prpf39, Pre-mRNA-processing factor 39, mousemouse

Predictions only

Length 665 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf39Q8K2Z2 2310007B03Rik-202ENSMUST00000143419 2074 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Prpf39Q8K2Z2 Gypc-202ENSMUST00000174000 2072 ntAPPRIS ALT2 TSL 3 BASIC14.16□□□□□ -0.14
Prpf39Q8K2Z2 Zbtb45-202ENSMUST00000172240 2722 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Prpf39Q8K2Z2 Frmpd4-204ENSMUST00000112149 8456 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
Prpf39Q8K2Z2 E430024P14Rik-203ENSMUST00000160545 2833 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Prpf39Q8K2Z2 Vps26b-201ENSMUST00000034470 3575 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Prpf39Q8K2Z2 Grtp1-206ENSMUST00000210317 3013 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Prpf39Q8K2Z2 Eif1ad-201ENSMUST00000025759 2469 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Prpf39Q8K2Z2 Rnpepl1-201ENSMUST00000027487 3337 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Prpf39Q8K2Z2 Gm35721-201ENSMUST00000220294 2014 ntTSL 5 BASIC14.16□□□□□ -0.14
Prpf39Q8K2Z2 Hcrt-202ENSMUST00000107360 509 ntTSL 5 BASIC14.16□□□□□ -0.14
Prpf39Q8K2Z2 Gm27437-201ENSMUST00000183429 107 ntBASIC14.16□□□□□ -0.14
Prpf39Q8K2Z2 Kansl3-206ENSMUST00000187628 336 ntTSL 5 BASIC14.16□□□□□ -0.14
Prpf39Q8K2Z2 AI463170-204ENSMUST00000220157 447 ntTSL 3 BASIC14.16□□□□□ -0.14
Prpf39Q8K2Z2 Armc12-201ENSMUST00000025060 1083 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Prpf39Q8K2Z2 Myoz3-201ENSMUST00000056533 870 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Prpf39Q8K2Z2 Lcmt1-201ENSMUST00000033025 1369 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Prpf39Q8K2Z2 Knop1-203ENSMUST00000106549 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Prpf39Q8K2Z2 Cyp2ab1-205ENSMUST00000182741 1497 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
Prpf39Q8K2Z2 Ldb3-207ENSMUST00000227819 1499 ntBASIC14.16□□□□□ -0.14
Prpf39Q8K2Z2 Mcoln2-201ENSMUST00000011152 2520 ntAPPRIS P4 TSL 1 (best) BASIC14.16□□□□□ -0.14
Prpf39Q8K2Z2 1810058I24Rik-203ENSMUST00000152147 2521 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Prpf39Q8K2Z2 Ngef-201ENSMUST00000027477 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Prpf39Q8K2Z2 4731419I09Rik-201ENSMUST00000180791 2820 ntTSL 2 BASIC14.16□□□□□ -0.14
Prpf39Q8K2Z2 Gm14752-201ENSMUST00000120719 2075 ntBASIC14.16□□□□□ -0.14
Prpf39Q8K2Z2 Vldlr-207ENSMUST00000167487 7971 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
Prpf39Q8K2Z2 Pcdha11-201ENSMUST00000115658 5359 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Prpf39Q8K2Z2 Zmym4-201ENSMUST00000106108 7102 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Prpf39Q8K2Z2 Esrrb-202ENSMUST00000110203 2363 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Prpf39Q8K2Z2 Socs3-201ENSMUST00000054002 2552 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Prpf39Q8K2Z2 Gtf3c5-202ENSMUST00000113889 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Prpf39Q8K2Z2 Adam15-201ENSMUST00000029676 2975 ntAPPRIS P4 TSL 1 (best) BASIC14.16□□□□□ -0.14
Prpf39Q8K2Z2 Nfasc-201ENSMUST00000043189 5072 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Prpf39Q8K2Z2 Pbrm1-203ENSMUST00000052239 5065 ntAPPRIS ALT1 TSL 5 BASIC14.15□□□□□ -0.14
Prpf39Q8K2Z2 Adamts20-204ENSMUST00000155907 6886 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Prpf39Q8K2Z2 Elovl6-205ENSMUST00000199910 2610 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Prpf39Q8K2Z2 Col25a1-201ENSMUST00000080335 2624 ntAPPRIS P4 TSL 5 BASIC14.15□□□□□ -0.14
Prpf39Q8K2Z2 Btrc-201ENSMUST00000065601 2978 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
Prpf39Q8K2Z2 Olfm1-202ENSMUST00000100244 2686 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Prpf39Q8K2Z2 Micu1-202ENSMUST00000092508 2294 ntAPPRIS ALT1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Prpf39Q8K2Z2 Serpinh1-205ENSMUST00000208119 2173 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Prpf39Q8K2Z2 Mmp21-201ENSMUST00000033278 1858 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Prpf39Q8K2Z2 Cplx4-201ENSMUST00000025397 1751 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Prpf39Q8K2Z2 Ttll9-202ENSMUST00000103155 1552 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
Prpf39Q8K2Z2 Gm9742-201ENSMUST00000165220 1553 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Prpf39Q8K2Z2 Syt7-205ENSMUST00000224135 1557 ntBASIC14.15□□□□□ -0.14
Prpf39Q8K2Z2 Cln3-203ENSMUST00000098036 1571 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Prpf39Q8K2Z2 Paqr8-202ENSMUST00000167119 1472 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Prpf39Q8K2Z2 Gh-201ENSMUST00000103071 862 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Prpf39Q8K2Z2 Nedd8-201ENSMUST00000010520 824 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Prpf39Q8K2Z2 Pigyl-201ENSMUST00000123680 695 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
Prpf39Q8K2Z2 C430049B03Rik-201ENSMUST00000129764 868 ntTSL 3 BASIC14.15□□□□□ -0.14
Prpf39Q8K2Z2 Synj2bp-205ENSMUST00000169158 691 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Prpf39Q8K2Z2 Arf5-202ENSMUST00000169841 768 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
Prpf39Q8K2Z2 Cpsf4l-205ENSMUST00000173655 1213 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
Prpf39Q8K2Z2 Gm17344-202ENSMUST00000173980 621 ntTSL 5 BASIC14.15□□□□□ -0.14
Prpf39Q8K2Z2 AA465934-202ENSMUST00000176545 356 ntTSL 2 BASIC14.15□□□□□ -0.14
Prpf39Q8K2Z2 Gm26517-201ENSMUST00000181279 1172 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Prpf39Q8K2Z2 Gm29542-201ENSMUST00000186876 704 ntTSL 3 BASIC14.15□□□□□ -0.14
Prpf39Q8K2Z2 Tbc1d17-209ENSMUST00000207293 692 ntTSL 3 BASIC14.15□□□□□ -0.14
Prpf39Q8K2Z2 Gm6218-201ENSMUST00000219812 628 ntBASIC14.15□□□□□ -0.14
Prpf39Q8K2Z2 Olfr142-201ENSMUST00000099752 918 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
Prpf39Q8K2Z2 Angel2-202ENSMUST00000066632 3714 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Prpf39Q8K2Z2 Atg16l1-201ENSMUST00000027512 3130 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
Prpf39Q8K2Z2 Adamts7-202ENSMUST00000113060 5098 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
Prpf39Q8K2Z2 Golim4-208ENSMUST00000167078 2902 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
Prpf39Q8K2Z2 Iqcm-203ENSMUST00000212704 2035 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Prpf39Q8K2Z2 2900026A02Rik-201ENSMUST00000050125 5876 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
Prpf39Q8K2Z2 Pxylp1-203ENSMUST00000119141 2768 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Prpf39Q8K2Z2 Sipa1-202ENSMUST00000080824 3837 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Prpf39Q8K2Z2 Atrip-201ENSMUST00000045011 2572 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Prpf39Q8K2Z2 Pde4dip-205ENSMUST00000168438 8264 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Prpf39Q8K2Z2 Snrpa-202ENSMUST00000122202 1336 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.15
Prpf39Q8K2Z2 Olfr61-202ENSMUST00000210241 1348 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.15
Prpf39Q8K2Z2 Slc52a3-202ENSMUST00000109858 2094 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Prpf39Q8K2Z2 Bmp3-202ENSMUST00000197143 2739 ntTSL 2 BASIC14.14□□□□□ -0.15
Prpf39Q8K2Z2 Nptn-206ENSMUST00000176557 1898 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Prpf39Q8K2Z2 Dzip1-202ENSMUST00000047208 4476 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
Prpf39Q8K2Z2 Epb41l2-201ENSMUST00000053748 4385 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Prpf39Q8K2Z2 Fxyd3-205ENSMUST00000167369 2894 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Prpf39Q8K2Z2 Gucy1a2-201ENSMUST00000115733 2243 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
Prpf39Q8K2Z2 AC139350.1-201ENSMUST00000227064 1594 ntBASIC14.14□□□□□ -0.15
Prpf39Q8K2Z2 Etv6-202ENSMUST00000111963 5707 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Prpf39Q8K2Z2 Cnnm2-202ENSMUST00000099373 3558 ntAPPRIS P4 TSL 1 (best) BASIC14.14□□□□□ -0.15
Prpf39Q8K2Z2 Zbtb33-201ENSMUST00000049740 5122 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Prpf39Q8K2Z2 Gfpt1-202ENSMUST00000113655 1255 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Prpf39Q8K2Z2 Prcd-202ENSMUST00000116318 799 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Prpf39Q8K2Z2 Kctd20-203ENSMUST00000118762 3839 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Prpf39Q8K2Z2 Gm12485-201ENSMUST00000119641 291 ntBASIC14.14□□□□□ -0.15
Prpf39Q8K2Z2 4930527A07Rik-201ENSMUST00000130677 559 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Prpf39Q8K2Z2 Gm13568-201ENSMUST00000156099 446 ntTSL 5 BASIC14.14□□□□□ -0.15
Prpf39Q8K2Z2 Gm5354-201ENSMUST00000182417 973 ntBASIC14.14□□□□□ -0.15
Prpf39Q8K2Z2 Mpv17-209ENSMUST00000202241 903 ntAPPRIS ALT1 TSL 3 BASIC14.14□□□□□ -0.15
Prpf39Q8K2Z2 Gm32926-202ENSMUST00000215162 1176 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Prpf39Q8K2Z2 Sftpa1-201ENSMUST00000022314 851 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Prpf39Q8K2Z2 Mllt10-203ENSMUST00000114671 5063 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Prpf39Q8K2Z2 Mcm9-206ENSMUST00000220007 3513 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Prpf39Q8K2Z2 Galnt17-201ENSMUST00000086023 8040 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Prpf39Q8K2Z2 Tshz2-202ENSMUST00000109159 4314 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Prpf39Q8K2Z2 Stt3b-201ENSMUST00000035010 4221 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 82.5 ms