Protein–RNA interactions for Protein: Q8CCB4

Vps53, Vacuolar protein sorting-associated protein 53 homolog, mousemouse

Predictions only

Length 832 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps53Q8CCB4 Ighv8-14-201ENSMUST00000196781 358 ntBASIC15.89■□□□□ 0.13
Vps53Q8CCB4 9230110C19Rik-202ENSMUST00000215478 533 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Vps53Q8CCB4 Gm30934-201ENSMUST00000215803 815 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Vps53Q8CCB4 Gm19220-201ENSMUST00000222682 803 ntBASIC15.89■□□□□ 0.13
Vps53Q8CCB4 AC139350.3-201ENSMUST00000226151 420 ntBASIC15.89■□□□□ 0.13
Vps53Q8CCB4 Mbp-203ENSMUST00000075372 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Vps53Q8CCB4 Prkca-201ENSMUST00000059595 8409 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Vps53Q8CCB4 Canx-201ENSMUST00000020637 3779 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Vps53Q8CCB4 Fbxo34-203ENSMUST00000163324 3132 ntAPPRIS ALT2 TSL 2 BASIC15.89■□□□□ 0.13
Vps53Q8CCB4 Fn1-216ENSMUST00000189821 7410 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Vps53Q8CCB4 Ank-201ENSMUST00000022875 3498 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Vps53Q8CCB4 Tpk1-201ENSMUST00000067888 2671 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Vps53Q8CCB4 Mtrr-209ENSMUST00000223398 3861 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Vps53Q8CCB4 Slc35d1-203ENSMUST00000150285 4242 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Vps53Q8CCB4 Rad17-202ENSMUST00000177848 2392 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Vps53Q8CCB4 Ces1h-201ENSMUST00000145041 1870 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
Vps53Q8CCB4 Ccne2-202ENSMUST00000108324 2908 ntAPPRIS P4 TSL 1 (best) BASIC15.88■□□□□ 0.13
Vps53Q8CCB4 Gtf2ird1-208ENSMUST00000167084 3283 ntTSL 5 BASIC15.88■□□□□ 0.13
Vps53Q8CCB4 Safb2-201ENSMUST00000075510 3277 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Vps53Q8CCB4 Pnpla2-203ENSMUST00000164016 2625 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
Vps53Q8CCB4 Gpr107-201ENSMUST00000056433 6134 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Vps53Q8CCB4 Galt-201ENSMUST00000084695 1595 ntAPPRIS P2 TSL 1 (best) BASIC15.88■□□□□ 0.13
Vps53Q8CCB4 Itpripl1-203ENSMUST00000154021 1753 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Vps53Q8CCB4 Fntb-206ENSMUST00000137826 1442 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
Vps53Q8CCB4 Fchsd1-201ENSMUST00000043437 4270 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Vps53Q8CCB4 Pcdhb18-201ENSMUST00000055949 5041 ntAPPRIS P1 BASIC15.88■□□□□ 0.13
Vps53Q8CCB4 Cep295nl-202ENSMUST00000168100 1602 ntAPPRIS P1 BASIC15.88■□□□□ 0.13
Vps53Q8CCB4 Kbtbd7-201ENSMUST00000061222 4526 ntAPPRIS P1 BASIC15.88■□□□□ 0.13
Vps53Q8CCB4 Ccdc151-201ENSMUST00000044926 2197 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
Vps53Q8CCB4 Boll-202ENSMUST00000114423 1106 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Vps53Q8CCB4 Mvk-203ENSMUST00000124260 1051 ntTSL 5 BASIC15.88■□□□□ 0.13
Vps53Q8CCB4 Agrp-202ENSMUST00000194091 734 ntAPPRIS P1 TSL 2 BASIC15.88■□□□□ 0.13
Vps53Q8CCB4 2310016G11Rik-202ENSMUST00000209111 733 ntTSL 3 BASIC15.88■□□□□ 0.13
Vps53Q8CCB4 AC155286.1-201ENSMUST00000218632 448 ntBASIC15.88■□□□□ 0.13
Vps53Q8CCB4 Gstm1-201ENSMUST00000004140 1289 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Vps53Q8CCB4 Fkbp2-201ENSMUST00000070878 642 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Vps53Q8CCB4 Ccdc58-201ENSMUST00000099937 747 ntTSL 3 BASIC15.88■□□□□ 0.13
Vps53Q8CCB4 Vegfa-202ENSMUST00000071648 3451 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
Vps53Q8CCB4 Usp19-201ENSMUST00000006854 4791 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
Vps53Q8CCB4 Zfp553-202ENSMUST00000106312 3342 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Vps53Q8CCB4 Syvn1-201ENSMUST00000025723 2780 ntAPPRIS ALT2 TSL 5 BASIC15.88■□□□□ 0.13
Vps53Q8CCB4 Hdac5-203ENSMUST00000107151 4852 ntTSL 5 BASIC15.88■□□□□ 0.13
Vps53Q8CCB4 Zfp711-202ENSMUST00000113409 4330 ntAPPRIS P2 TSL 5 BASIC15.88■□□□□ 0.13
Vps53Q8CCB4 Mkrn1-201ENSMUST00000031985 3046 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
Vps53Q8CCB4 Slc5a6-202ENSMUST00000114668 3436 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Vps53Q8CCB4 Cep295nl-201ENSMUST00000103024 1944 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Vps53Q8CCB4 Ticrr-201ENSMUST00000035977 7199 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Vps53Q8CCB4 Kcnq2-207ENSMUST00000103050 2713 ntAPPRIS ALT2 TSL 5 BASIC15.88■□□□□ 0.13
Vps53Q8CCB4 Cpeb3-208ENSMUST00000132580 3148 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
Vps53Q8CCB4 Otud7b-201ENSMUST00000035519 8043 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Vps53Q8CCB4 Umad1-208ENSMUST00000162034 2015 ntAPPRIS ALT2 TSL 3 BASIC15.87■□□□□ 0.13
Vps53Q8CCB4 Ube2d-ps-205ENSMUST00000142942 1840 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Vps53Q8CCB4 Ate1-202ENSMUST00000035458 4685 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
Vps53Q8CCB4 Gjb4-202ENSMUST00000106090 1446 ntAPPRIS P1 TSL 5 BASIC15.87■□□□□ 0.13
Vps53Q8CCB4 Gjb4-201ENSMUST00000060419 1445 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Vps53Q8CCB4 1600014C10Rik-205ENSMUST00000178876 3283 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Vps53Q8CCB4 Msh2-201ENSMUST00000024967 3283 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Vps53Q8CCB4 Zyg11b-201ENSMUST00000043616 8691 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Vps53Q8CCB4 Ccno-201ENSMUST00000038404 1875 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Vps53Q8CCB4 Dgki-202ENSMUST00000090314 3784 ntAPPRIS ALT2 TSL 5 BASIC15.87■□□□□ 0.13
Vps53Q8CCB4 Pisd-ps1-201ENSMUST00000119128 1115 ntBASIC15.87■□□□□ 0.13
Vps53Q8CCB4 Gm15806-201ENSMUST00000120696 955 ntBASIC15.87■□□□□ 0.13
Vps53Q8CCB4 Rnaseh2a-206ENSMUST00000128972 1141 ntTSL 2 BASIC15.87■□□□□ 0.13
Vps53Q8CCB4 Hoxa7-203ENSMUST00000140316 643 ntTSL 3 BASIC15.87■□□□□ 0.13
Vps53Q8CCB4 Pax8-208ENSMUST00000153601 1226 ntTSL 5 BASIC15.87■□□□□ 0.13
Vps53Q8CCB4 Naxd-205ENSMUST00000178721 1108 ntTSL 5 BASIC15.87■□□□□ 0.13
Vps53Q8CCB4 Mir7085-201ENSMUST00000184353 66 ntBASIC15.87■□□□□ 0.13
Vps53Q8CCB4 H2-Bl-210ENSMUST00000195833 829 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Vps53Q8CCB4 AC153962.4-201ENSMUST00000217878 242 ntBASIC15.87■□□□□ 0.13
Vps53Q8CCB4 Taf11-201ENSMUST00000025057 1220 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Vps53Q8CCB4 Dnmt3b-205ENSMUST00000103150 4070 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
Vps53Q8CCB4 Gm9918-201ENSMUST00000181801 2192 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Vps53Q8CCB4 Rtl6-201ENSMUST00000069476 4426 ntAPPRIS P1 BASIC15.87■□□□□ 0.13
Vps53Q8CCB4 Vasp-201ENSMUST00000032561 2215 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Vps53Q8CCB4 Thumpd1-201ENSMUST00000033236 2689 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Vps53Q8CCB4 Pfkfb3-203ENSMUST00000100411 2008 ntTSL 5 BASIC15.87■□□□□ 0.13
Vps53Q8CCB4 R3hdm2-212ENSMUST00000166820 4281 ntAPPRIS P2 TSL 5 BASIC15.87■□□□□ 0.13
Vps53Q8CCB4 Zdhhc23-201ENSMUST00000036321 1380 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Vps53Q8CCB4 Slc7a7-202ENSMUST00000195970 2057 ntAPPRIS P1 TSL 5 BASIC15.87■□□□□ 0.13
Vps53Q8CCB4 Wwox-202ENSMUST00000109107 2383 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Vps53Q8CCB4 Tle3-215ENSMUST00000162583 4299 ntAPPRIS ALT1 TSL 5 BASIC15.86■□□□□ 0.13
Vps53Q8CCB4 Il11-201ENSMUST00000094892 1949 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Vps53Q8CCB4 Tspan12-202ENSMUST00000120965 2157 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Vps53Q8CCB4 Plxdc1-203ENSMUST00000107565 2439 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Vps53Q8CCB4 Ccnh-204ENSMUST00000164127 1718 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Vps53Q8CCB4 Zfp57-201ENSMUST00000069250 1749 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
Vps53Q8CCB4 Luc7l3-209ENSMUST00000166312 5244 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Vps53Q8CCB4 Kcnq1-201ENSMUST00000009689 3029 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Vps53Q8CCB4 Anks1b-231ENSMUST00000183136 2786 ntTSL 5 BASIC15.86■□□□□ 0.13
Vps53Q8CCB4 Ntng1-208ENSMUST00000133268 5587 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Vps53Q8CCB4 Lcn5-203ENSMUST00000100313 660 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
Vps53Q8CCB4 Gpr153-202ENSMUST00000105650 3838 ntAPPRIS ALT2 TSL 5 BASIC15.86■□□□□ 0.13
Vps53Q8CCB4 Gm12585-201ENSMUST00000117307 290 ntBASIC15.86■□□□□ 0.13
Vps53Q8CCB4 Mrps17-202ENSMUST00000118420 843 ntAPPRIS P1 TSL 2 BASIC15.86■□□□□ 0.13
Vps53Q8CCB4 Sec11a-203ENSMUST00000119980 903 ntTSL 2 BASIC15.86■□□□□ 0.13
Vps53Q8CCB4 Gm6266-201ENSMUST00000203844 806 ntBASIC15.86■□□□□ 0.13
Vps53Q8CCB4 Cnpy2-201ENSMUST00000026446 763 ntAPPRIS P1 TSL 5 BASIC15.86■□□□□ 0.13
Vps53Q8CCB4 Smim11-201ENSMUST00000063641 517 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Vps53Q8CCB4 Gm19461-205ENSMUST00000191207 2566 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Vps53Q8CCB4 Lsm14b-202ENSMUST00000058764 2566 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Retrieved 100 of 76,532 protein–RNA pairs in 46.3 ms