Protein–RNA interactions for Protein: Q8C196

Cps1, Carbamoyl-phosphate synthase [ammonia], mitochondrial, mousemouse

Predictions only

Length 1,500 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cps1Q8C196 Sqle-201ENSMUST00000022977 2758 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Cps1Q8C196 Tcf24-202ENSMUST00000185184 4193 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
Cps1Q8C196 Noxa1-202ENSMUST00000114373 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Cps1Q8C196 Ccdc28b-202ENSMUST00000106035 821 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Cps1Q8C196 1700042G07Rik-201ENSMUST00000106492 385 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Cps1Q8C196 Gm15547-201ENSMUST00000122152 333 ntBASIC17.98■□□□□ 0.47
Cps1Q8C196 Snhg17-206ENSMUST00000152125 1046 ntTSL 3 BASIC17.98■□□□□ 0.47
Cps1Q8C196 Lhx1-201ENSMUST00000018842 3846 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Cps1Q8C196 Gm38092-201ENSMUST00000195600 653 ntBASIC17.98■□□□□ 0.47
Cps1Q8C196 Gm9678-201ENSMUST00000198979 1149 ntBASIC17.98■□□□□ 0.47
Cps1Q8C196 Ccdc28a-202ENSMUST00000080860 1190 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Cps1Q8C196 Gpr4-201ENSMUST00000060225 2882 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Cps1Q8C196 Pnrc2-201ENSMUST00000030436 1919 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Cps1Q8C196 Slc25a22-223ENSMUST00000201710 2565 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
Cps1Q8C196 Rundc1-201ENSMUST00000040561 3223 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Cps1Q8C196 Sfrp1-201ENSMUST00000033952 4372 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Cps1Q8C196 Lrp8-201ENSMUST00000030356 4555 ntAPPRIS P5 TSL 5 BASIC17.97■□□□□ 0.47
Cps1Q8C196 Ndst2-202ENSMUST00000223679 3907 ntAPPRIS P1 BASIC17.97■□□□□ 0.47
Cps1Q8C196 Naa50-203ENSMUST00000159514 3756 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Cps1Q8C196 Islr2-202ENSMUST00000163200 4123 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Cps1Q8C196 Map4k4-201ENSMUST00000163854 5782 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
Cps1Q8C196 Ece2-201ENSMUST00000003898 3152 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
Cps1Q8C196 Nob1-201ENSMUST00000003946 1658 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Cps1Q8C196 Eif3f-201ENSMUST00000033342 2514 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Cps1Q8C196 Tbc1d20-201ENSMUST00000028963 3386 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Cps1Q8C196 Coil-202ENSMUST00000107898 3120 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
Cps1Q8C196 Robo3-202ENSMUST00000115038 4797 ntAPPRIS P2 TSL 5 BASIC17.97■□□□□ 0.47
Cps1Q8C196 Trp53-203ENSMUST00000108658 1771 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
Cps1Q8C196 Trp53-201ENSMUST00000005371 1772 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Cps1Q8C196 Zscan2-201ENSMUST00000044115 2310 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Cps1Q8C196 Ncmap-202ENSMUST00000105857 958 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Cps1Q8C196 Apoc1-202ENSMUST00000108451 532 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Cps1Q8C196 Gm14277-201ENSMUST00000121195 360 ntBASIC17.97■□□□□ 0.47
Cps1Q8C196 Gm11961-202ENSMUST00000141157 760 ntTSL 3 BASIC17.97■□□□□ 0.47
Cps1Q8C196 Ly6g6c-201ENSMUST00000173207 598 ntAPPRIS ALT2 TSL 3 BASIC17.97■□□□□ 0.47
Cps1Q8C196 Ly6g6c-202ENSMUST00000173478 962 ntAPPRIS P2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Cps1Q8C196 Klf15-202ENSMUST00000113530 2374 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
Cps1Q8C196 Nt5c2-203ENSMUST00000172239 3148 ntTSL 5 BASIC17.97■□□□□ 0.47
Cps1Q8C196 Tlnrd1-201ENSMUST00000094216 4433 ntAPPRIS P1 BASIC17.97■□□□□ 0.47
Cps1Q8C196 Tef-201ENSMUST00000023024 4079 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Cps1Q8C196 Slc3a2-202ENSMUST00000170157 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Cps1Q8C196 Wbscr25-202ENSMUST00000148729 2075 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Cps1Q8C196 Me2-201ENSMUST00000025439 2455 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Cps1Q8C196 Runx1t1-201ENSMUST00000006761 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Cps1Q8C196 Dclk2-206ENSMUST00000193632 2336 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.47
Cps1Q8C196 Glis1-202ENSMUST00000106738 2744 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.47
Cps1Q8C196 Ppp2r5e-205ENSMUST00000220035 3135 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Cps1Q8C196 Arl6ip6-201ENSMUST00000028336 2548 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Cps1Q8C196 Tmub1-203ENSMUST00000115036 1455 ntTSL 5 BASIC17.96■□□□□ 0.47
Cps1Q8C196 Cep97-206ENSMUST00000122280 1057 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Cps1Q8C196 Nat8f1-201ENSMUST00000161198 1021 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Cps1Q8C196 Pxt1-201ENSMUST00000051526 710 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Cps1Q8C196 Stx5a-202ENSMUST00000073430 2112 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Cps1Q8C196 Tnnt3-201ENSMUST00000074187 1007 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
Cps1Q8C196 Gm10308-201ENSMUST00000095183 742 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.47
Cps1Q8C196 Tnni3-201ENSMUST00000098859 912 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Cps1Q8C196 Zkscan3-203ENSMUST00000116434 2600 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Cps1Q8C196 Repin1-204ENSMUST00000135151 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Cps1Q8C196 Wdr5-201ENSMUST00000113952 2890 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Cps1Q8C196 Ebf4-201ENSMUST00000110286 2670 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Cps1Q8C196 Wnk2-202ENSMUST00000049265 6738 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.47
Cps1Q8C196 Fetub-201ENSMUST00000023587 1573 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.46
Cps1Q8C196 Ppp1r1b-206ENSMUST00000150762 1801 ntTSL 1 (best) BASIC17.96■□□□□ 0.46
Cps1Q8C196 Csnk1g1-212ENSMUST00000206048 2073 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
Cps1Q8C196 Gm37737-201ENSMUST00000195013 1638 ntBASIC17.95■□□□□ 0.46
Cps1Q8C196 Rybp-201ENSMUST00000101118 4503 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Cps1Q8C196 1110034G24Rik-202ENSMUST00000110132 1471 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Cps1Q8C196 Jph4-201ENSMUST00000022819 4489 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Cps1Q8C196 Nkain2-203ENSMUST00000191234 3760 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Cps1Q8C196 Tmem53-203ENSMUST00000106434 923 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Cps1Q8C196 Arf4os-201ENSMUST00000166902 566 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Cps1Q8C196 Polr2i-201ENSMUST00000019882 819 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Cps1Q8C196 Fam168a-206ENSMUST00000208013 1129 ntTSL 5 BASIC17.95■□□□□ 0.46
Cps1Q8C196 Tpd52l1-203ENSMUST00000213639 827 ntAPPRIS ALT2 TSL 2 BASIC17.95■□□□□ 0.46
Cps1Q8C196 Gm32468-201ENSMUST00000214199 1040 ntTSL 5 BASIC17.95■□□□□ 0.46
Cps1Q8C196 Treml1-201ENSMUST00000024792 1235 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Cps1Q8C196 Blvrb-201ENSMUST00000037399 1028 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Cps1Q8C196 Gm22058-201ENSMUST00000083393 310 ntBASIC17.95■□□□□ 0.46
Cps1Q8C196 Cpq-207ENSMUST00000228916 1842 ntAPPRIS P1 BASIC17.95■□□□□ 0.46
Cps1Q8C196 Nptn-206ENSMUST00000176557 1898 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Cps1Q8C196 Lrp11-203ENSMUST00000130590 3220 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Cps1Q8C196 Zfp277-202ENSMUST00000069692 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Cps1Q8C196 Plekhn1-201ENSMUST00000105569 3014 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Cps1Q8C196 Kcnh4-202ENSMUST00000107363 3948 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
Cps1Q8C196 Dnd1-201ENSMUST00000061522 1451 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Cps1Q8C196 Calr3-201ENSMUST00000019876 1769 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Cps1Q8C196 Usp1-201ENSMUST00000030289 3577 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Cps1Q8C196 Map3k14-201ENSMUST00000021324 4246 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Cps1Q8C196 Fndc7-201ENSMUST00000053065 3009 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Cps1Q8C196 Ppox-201ENSMUST00000073120 1821 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Cps1Q8C196 Gm14371-201ENSMUST00000138925 1518 ntBASIC17.94■□□□□ 0.46
Cps1Q8C196 Fam76a-201ENSMUST00000030696 3053 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Cps1Q8C196 Pitpnb-201ENSMUST00000086635 2761 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
Cps1Q8C196 Fam169b-201ENSMUST00000098378 2776 ntTSL 5 BASIC17.94■□□□□ 0.46
Cps1Q8C196 Dnm1l-201ENSMUST00000023477 4017 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Cps1Q8C196 5830418P13Rik-201ENSMUST00000143564 2178 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Cps1Q8C196 4930513N10Rik-203ENSMUST00000145562 2803 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Cps1Q8C196 Gm11564-201ENSMUST00000105055 691 ntAPPRIS P1 BASIC17.94■□□□□ 0.46
Cps1Q8C196 Prox1os-201ENSMUST00000110279 828 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Cps1Q8C196 Sgsm1-203ENSMUST00000112324 1102 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Retrieved 100 of 76,532 protein–RNA pairs in 27.4 ms