Protein–RNA interactions for Protein: Q8BXQ3

Lrtm1, Leucine-rich repeat and transmembrane domain-containing protein 1, mousemouse

Predictions only

Length 356 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lrtm1Q8BXQ3 Lcmt1-201ENSMUST00000033025 1369 ntAPPRIS P2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Lrtm1Q8BXQ3 Olfr56-201ENSMUST00000056759 1925 ntTSL 5 BASIC11.92□□□□□ -0.5
Lrtm1Q8BXQ3 Psmd11-201ENSMUST00000017572 2848 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Lrtm1Q8BXQ3 Elovl6-205ENSMUST00000199910 2610 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Lrtm1Q8BXQ3 Sgce-207ENSMUST00000126151 1522 ntTSL 5 BASIC11.91□□□□□ -0.5
Lrtm1Q8BXQ3 Sema4b-204ENSMUST00000205822 3760 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Lrtm1Q8BXQ3 Clcnka-202ENSMUST00000105790 2511 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Lrtm1Q8BXQ3 Knop1-203ENSMUST00000106549 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Lrtm1Q8BXQ3 Dab1-203ENSMUST00000106830 5278 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Lrtm1Q8BXQ3 Herpud1-205ENSMUST00000161576 1952 ntAPPRIS P2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Lrtm1Q8BXQ3 Etfrf1-205ENSMUST00000111724 1618 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Lrtm1Q8BXQ3 Prrx2-202ENSMUST00000113592 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Lrtm1Q8BXQ3 Akirin1-ps-201ENSMUST00000119676 458 ntBASIC11.91□□□□□ -0.5
Lrtm1Q8BXQ3 Gm12341-201ENSMUST00000119724 503 ntBASIC11.91□□□□□ -0.5
Lrtm1Q8BXQ3 A530058N18Rik-202ENSMUST00000134129 411 ntTSL 3 BASIC11.91□□□□□ -0.5
Lrtm1Q8BXQ3 1700121C08Rik-201ENSMUST00000137546 677 ntTSL 3 BASIC11.91□□□□□ -0.5
Lrtm1Q8BXQ3 Gm13134-202ENSMUST00000144347 387 ntTSL 2 BASIC11.91□□□□□ -0.5
Lrtm1Q8BXQ3 1600025M17Rik-202ENSMUST00000151426 547 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Lrtm1Q8BXQ3 Gm26464-201ENSMUST00000157094 305 ntBASIC11.91□□□□□ -0.5
Lrtm1Q8BXQ3 1700080E11Rik-202ENSMUST00000190661 682 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Lrtm1Q8BXQ3 Gm43303-201ENSMUST00000200133 669 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Lrtm1Q8BXQ3 Gm32926-202ENSMUST00000215162 1176 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Lrtm1Q8BXQ3 Gm18624-201ENSMUST00000220966 658 ntBASIC11.91□□□□□ -0.5
Lrtm1Q8BXQ3 Car5a-201ENSMUST00000057653 1249 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Lrtm1Q8BXQ3 Eapp-201ENSMUST00000067272 590 ntTSL 3 BASIC11.91□□□□□ -0.5
Lrtm1Q8BXQ3 Tex13c3-201ENSMUST00000089246 876 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Lrtm1Q8BXQ3 Rbm47-201ENSMUST00000094756 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Lrtm1Q8BXQ3 Atg16l1-201ENSMUST00000027512 3130 ntAPPRIS P3 TSL 1 (best) BASIC11.91□□□□□ -0.5
Lrtm1Q8BXQ3 Nphs2-201ENSMUST00000027896 3116 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Lrtm1Q8BXQ3 F830212C03Rik-201ENSMUST00000191701 2285 ntBASIC11.91□□□□□ -0.5
Lrtm1Q8BXQ3 Ccnc-203ENSMUST00000108240 1406 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Lrtm1Q8BXQ3 Ypel3-203ENSMUST00000106357 1594 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Lrtm1Q8BXQ3 Cacna1g-209ENSMUST00000107791 8002 ntAPPRIS ALT2 TSL 5 BASIC11.91□□□□□ -0.5
Lrtm1Q8BXQ3 Hcn3-201ENSMUST00000029686 4002 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Lrtm1Q8BXQ3 Lysmd4-201ENSMUST00000058771 2898 ntAPPRIS P2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Lrtm1Q8BXQ3 9030612E09Rik-201ENSMUST00000053792 1859 ntAPPRIS P1 BASIC11.91□□□□□ -0.5
Lrtm1Q8BXQ3 Rbm47-206ENSMUST00000200775 3180 ntAPPRIS P3 TSL 1 (best) BASIC11.91□□□□□ -0.5
Lrtm1Q8BXQ3 Gad2-201ENSMUST00000028123 5744 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Lrtm1Q8BXQ3 Tcf3-205ENSMUST00000105341 2451 ntAPPRIS ALT2 TSL 5 BASIC11.91□□□□□ -0.5
Lrtm1Q8BXQ3 Bag6-203ENSMUST00000172571 3599 ntTSL 5 BASIC11.9□□□□□ -0.5
Lrtm1Q8BXQ3 Ttc5-201ENSMUST00000006451 1842 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Lrtm1Q8BXQ3 Cblb-204ENSMUST00000227062 3728 ntAPPRIS P2 BASIC11.9□□□□□ -0.5
Lrtm1Q8BXQ3 Pja1-202ENSMUST00000113790 2108 ntAPPRIS ALT2 TSL 2 BASIC11.9□□□□□ -0.5
Lrtm1Q8BXQ3 Phldb1-214ENSMUST00000147495 5424 ntAPPRIS P5 TSL 5 BASIC11.9□□□□□ -0.5
Lrtm1Q8BXQ3 Igf2os-203ENSMUST00000141681 4778 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Lrtm1Q8BXQ3 Cep170b-204ENSMUST00000220627 5395 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Lrtm1Q8BXQ3 Gtf2ird1-205ENSMUST00000100654 3156 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Lrtm1Q8BXQ3 Rxrg-202ENSMUST00000111380 1630 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Lrtm1Q8BXQ3 Nfe2l1-204ENSMUST00000107659 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Lrtm1Q8BXQ3 Cpt2-201ENSMUST00000030345 2372 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Lrtm1Q8BXQ3 Specc1-209ENSMUST00000201671 2523 ntTSL 5 BASIC11.9□□□□□ -0.5
Lrtm1Q8BXQ3 Egr2-203ENSMUST00000127820 2665 ntAPPRIS ALT2 TSL 5 BASIC11.9□□□□□ -0.5
Lrtm1Q8BXQ3 Eya4-206ENSMUST00000219315 3100 ntAPPRIS ALT2 TSL 5 BASIC11.9□□□□□ -0.5
Lrtm1Q8BXQ3 Pltp-203ENSMUST00000109317 1575 ntTSL 5 BASIC11.9□□□□□ -0.5
Lrtm1Q8BXQ3 Gpsm1-204ENSMUST00000114134 2043 ntTSL 3 BASIC11.9□□□□□ -0.5
Lrtm1Q8BXQ3 Gm15678-201ENSMUST00000117573 960 ntBASIC11.9□□□□□ -0.5
Lrtm1Q8BXQ3 Gm14928-201ENSMUST00000120198 477 ntBASIC11.9□□□□□ -0.5
Lrtm1Q8BXQ3 Gm14730-201ENSMUST00000122378 1045 ntBASIC11.9□□□□□ -0.5
Lrtm1Q8BXQ3 Gnb2-209ENSMUST00000143495 1285 ntTSL 5 BASIC11.9□□□□□ -0.5
Lrtm1Q8BXQ3 Tdg-208ENSMUST00000151390 3502 ntAPPRIS P3 TSL 1 (best) BASIC11.9□□□□□ -0.5
Lrtm1Q8BXQ3 Sh3glb1-201ENSMUST00000163279 3961 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Lrtm1Q8BXQ3 Pfdn6-204ENSMUST00000174048 560 ntAPPRIS P1 TSL 2 BASIC11.9□□□□□ -0.5
Lrtm1Q8BXQ3 Gm37917-201ENSMUST00000194711 392 ntBASIC11.9□□□□□ -0.5
Lrtm1Q8BXQ3 Gm7498-201ENSMUST00000203282 1084 ntBASIC11.9□□□□□ -0.5
Lrtm1Q8BXQ3 Tomm20l-201ENSMUST00000021482 578 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Lrtm1Q8BXQ3 Ilvbl-203ENSMUST00000218215 2331 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Lrtm1Q8BXQ3 Emb-201ENSMUST00000022242 2923 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Lrtm1Q8BXQ3 AC131997.1-201ENSMUST00000228611 1229 ntBASIC11.9□□□□□ -0.5
Lrtm1Q8BXQ3 Map7d1-201ENSMUST00000061143 3351 ntAPPRIS P3 TSL 1 (best) BASIC11.9□□□□□ -0.5
Lrtm1Q8BXQ3 Ablim1-202ENSMUST00000099294 6232 ntAPPRIS ALT2 TSL 5 BASIC11.9□□□□□ -0.5
Lrtm1Q8BXQ3 Dnajc27-201ENSMUST00000020986 4698 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Lrtm1Q8BXQ3 Bcl11b-201ENSMUST00000066060 8111 ntAPPRIS P4 TSL 1 (best) BASIC11.9□□□□□ -0.5
Lrtm1Q8BXQ3 Setd1b-206ENSMUST00000174836 7515 ntAPPRIS ALT2 TSL 5 BASIC11.9□□□□□ -0.5
Lrtm1Q8BXQ3 Nid2-201ENSMUST00000022340 4876 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Lrtm1Q8BXQ3 Chd1-202ENSMUST00000024627 7916 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Lrtm1Q8BXQ3 Zc3h13-201ENSMUST00000022577 6151 ntAPPRIS P2 TSL 5 BASIC11.9□□□□□ -0.5
Lrtm1Q8BXQ3 Tcirg1-201ENSMUST00000001801 2688 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Lrtm1Q8BXQ3 Myo1c-201ENSMUST00000069057 4547 ntTSL 1 (best) BASIC11.9□□□□□ -0.51
Lrtm1Q8BXQ3 Specc1-202ENSMUST00000092415 6797 ntAPPRIS ALT2 TSL 5 BASIC11.9□□□□□ -0.51
Lrtm1Q8BXQ3 Slc25a18-201ENSMUST00000112682 1911 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.51
Lrtm1Q8BXQ3 Trim45-203ENSMUST00000106980 3337 ntAPPRIS P3 TSL 1 (best) BASIC11.89□□□□□ -0.51
Lrtm1Q8BXQ3 Rhbdl3-201ENSMUST00000017836 3736 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Lrtm1Q8BXQ3 Tspan32-205ENSMUST00000105924 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Lrtm1Q8BXQ3 Pus7-201ENSMUST00000119946 3407 ntAPPRIS P3 TSL 1 (best) BASIC11.89□□□□□ -0.51
Lrtm1Q8BXQ3 Bmp3-202ENSMUST00000197143 2739 ntTSL 2 BASIC11.89□□□□□ -0.51
Lrtm1Q8BXQ3 Ntrk2-208ENSMUST00000225583 2719 ntBASIC11.89□□□□□ -0.51
Lrtm1Q8BXQ3 Ccdc106-202ENSMUST00000108571 1318 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Lrtm1Q8BXQ3 Hsph1-211ENSMUST00000202361 3802 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Lrtm1Q8BXQ3 Proser2-202ENSMUST00000114942 4398 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Lrtm1Q8BXQ3 CT030684.3-201ENSMUST00000227308 2445 ntBASIC11.89□□□□□ -0.51
Lrtm1Q8BXQ3 Adgrb2-202ENSMUST00000097868 4635 ntAPPRIS ALT2 TSL 5 BASIC11.89□□□□□ -0.51
Lrtm1Q8BXQ3 4731419I09Rik-201ENSMUST00000180791 2820 ntTSL 2 BASIC11.89□□□□□ -0.51
Lrtm1Q8BXQ3 Klhdc3-201ENSMUST00000071841 2123 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Lrtm1Q8BXQ3 Tspyl1-201ENSMUST00000061372 3086 ntAPPRIS P1 BASIC11.89□□□□□ -0.51
Lrtm1Q8BXQ3 Cnmd-201ENSMUST00000022603 1433 ntAPPRIS P3 TSL 1 (best) BASIC11.89□□□□□ -0.51
Lrtm1Q8BXQ3 Il6ra-201ENSMUST00000029559 3343 ntAPPRIS P3 TSL 1 (best) BASIC11.89□□□□□ -0.51
Lrtm1Q8BXQ3 Plch2-208ENSMUST00000145662 1818 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Lrtm1Q8BXQ3 Tnks1bp1-202ENSMUST00000111605 5747 ntAPPRIS P2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Lrtm1Q8BXQ3 Scp2-201ENSMUST00000030340 2640 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Lrtm1Q8BXQ3 Cabp7-201ENSMUST00000009219 2628 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 36.1 ms