Protein–RNA interactions for Protein: Q6ZWR6

Syne1, Nesprin-1, mousemouse

Predictions only

Length 8,799 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Syne1Q6ZWR6 Bnc2-215ENSMUST00000176691 3385 ntAPPRIS P2 TSL 1 (best) BASIC4.64□□□□□ -1.67
Syne1Q6ZWR6 Shank3-203ENSMUST00000109309 7365 ntAPPRIS ALT2 TSL 1 (best) BASIC4.64□□□□□ -1.67
Syne1Q6ZWR6 Klhl12-201ENSMUST00000027725 3408 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
Syne1Q6ZWR6 Gm13369-201ENSMUST00000119442 987 ntBASIC4.64□□□□□ -1.67
Syne1Q6ZWR6 Gm15429-201ENSMUST00000151268 798 ntBASIC4.64□□□□□ -1.67
Syne1Q6ZWR6 Txnl4b-202ENSMUST00000178445 830 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
Syne1Q6ZWR6 Oaz1-207ENSMUST00000180036 1044 ntAPPRIS P2 TSL 5 BASIC4.64□□□□□ -1.67
Syne1Q6ZWR6 Mien1-201ENSMUST00000002655 747 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
Syne1Q6ZWR6 Ralgds-202ENSMUST00000100241 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC4.64□□□□□ -1.67
Syne1Q6ZWR6 Sipa1-204ENSMUST00000169854 3583 ntAPPRIS P1 TSL 5 BASIC4.64□□□□□ -1.67
Syne1Q6ZWR6 Kif11-201ENSMUST00000012587 4819 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
Syne1Q6ZWR6 Lrrc10-201ENSMUST00000073834 1428 ntAPPRIS P1 BASIC4.64□□□□□ -1.67
Syne1Q6ZWR6 Mlkl-201ENSMUST00000056157 2003 ntAPPRIS ALT2 TSL 1 (best) BASIC4.64□□□□□ -1.67
Syne1Q6ZWR6 Hoxa7-203ENSMUST00000140316 643 ntTSL 3 BASIC4.64□□□□□ -1.67
Syne1Q6ZWR6 Gm24644-201ENSMUST00000157114 139 ntBASIC4.64□□□□□ -1.67
Syne1Q6ZWR6 Gm36634-201ENSMUST00000218356 1259 ntTSL 3 BASIC4.64□□□□□ -1.67
Syne1Q6ZWR6 Jmy-201ENSMUST00000065537 8776 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
Syne1Q6ZWR6 Fam189b-202ENSMUST00000117278 2593 ntTSL 5 BASIC4.63□□□□□ -1.67
Syne1Q6ZWR6 Knop1-203ENSMUST00000106549 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC4.63□□□□□ -1.67
Syne1Q6ZWR6 Gm9946-202ENSMUST00000162741 1580 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
Syne1Q6ZWR6 Otop2-201ENSMUST00000055490 2335 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
Syne1Q6ZWR6 Slc4a5-201ENSMUST00000039212 5123 ntAPPRIS P2 TSL 5 BASIC4.63□□□□□ -1.67
Syne1Q6ZWR6 Tex19.1-201ENSMUST00000039088 1745 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
Syne1Q6ZWR6 Samd4-203ENSMUST00000125113 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC4.63□□□□□ -1.67
Syne1Q6ZWR6 Atp13a3-202ENSMUST00000100013 7310 ntAPPRIS P4 TSL 5 BASIC4.63□□□□□ -1.67
Syne1Q6ZWR6 Slc44a3-201ENSMUST00000039197 2620 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
Syne1Q6ZWR6 Llgl2-212ENSMUST00000177736 3612 ntAPPRIS ALT2 TSL 2 BASIC4.63□□□□□ -1.67
Syne1Q6ZWR6 Gm11793-201ENSMUST00000120433 981 ntBASIC4.63□□□□□ -1.67
Syne1Q6ZWR6 Ccdc103-202ENSMUST00000159834 1156 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
Syne1Q6ZWR6 Creb3-206ENSMUST00000167751 1212 ntAPPRIS ALT2 TSL 5 BASIC4.63□□□□□ -1.67
Syne1Q6ZWR6 Mir7070-201ENSMUST00000183657 86 ntBASIC4.63□□□□□ -1.67
Syne1Q6ZWR6 Gm43118-201ENSMUST00000199149 775 ntBASIC4.63□□□□□ -1.67
Syne1Q6ZWR6 Gm9299-201ENSMUST00000206392 1140 ntBASIC4.63□□□□□ -1.67
Syne1Q6ZWR6 St13-201ENSMUST00000023039 1089 ntTSL 5 BASIC4.63□□□□□ -1.67
Syne1Q6ZWR6 Exosc7-201ENSMUST00000026891 1053 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
Syne1Q6ZWR6 Mea1-201ENSMUST00000002845 840 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
Syne1Q6ZWR6 Cebpe-201ENSMUST00000064290 1241 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
Syne1Q6ZWR6 Olfr521-201ENSMUST00000098263 967 ntAPPRIS P1 BASIC4.63□□□□□ -1.67
Syne1Q6ZWR6 Bdnf-205ENSMUST00000111045 3973 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
Syne1Q6ZWR6 Gm13034-201ENSMUST00000121342 3177 ntBASIC4.63□□□□□ -1.67
Syne1Q6ZWR6 Gm21038-201ENSMUST00000222205 1383 ntBASIC4.63□□□□□ -1.67
Syne1Q6ZWR6 Shc4-203ENSMUST00000110480 3671 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
Syne1Q6ZWR6 Slc35a2-202ENSMUST00000115660 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC4.63□□□□□ -1.67
Syne1Q6ZWR6 Sox17-206ENSMUST00000192650 3242 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
Syne1Q6ZWR6 Grin1-208ENSMUST00000114318 3920 ntTSL 5 BASIC4.63□□□□□ -1.67
Syne1Q6ZWR6 Gm12176-201ENSMUST00000121420 875 ntBASIC4.63□□□□□ -1.67
Syne1Q6ZWR6 Gm45692-201ENSMUST00000131138 557 ntAPPRIS P1 TSL 5 BASIC4.63□□□□□ -1.67
Syne1Q6ZWR6 Sox2ot-216ENSMUST00000200092 767 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
Syne1Q6ZWR6 Acbd5-208ENSMUST00000226571 3802 ntAPPRIS ALT2 BASIC4.63□□□□□ -1.67
Syne1Q6ZWR6 Lim2-201ENSMUST00000004732 884 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
Syne1Q6ZWR6 B3gntl1-201ENSMUST00000062654 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC4.63□□□□□ -1.67
Syne1Q6ZWR6 Aldh3b1-201ENSMUST00000051803 1875 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
Syne1Q6ZWR6 Ulk3-201ENSMUST00000053230 2826 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
Syne1Q6ZWR6 Prickle1-202ENSMUST00000109255 4144 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
Syne1Q6ZWR6 Slitrk3-201ENSMUST00000059407 3587 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
Syne1Q6ZWR6 Agrn-206ENSMUST00000180572 6891 ntAPPRIS P1 TSL 5 BASIC4.63□□□□□ -1.67
Syne1Q6ZWR6 Foxo6os-201ENSMUST00000152384 2291 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
Syne1Q6ZWR6 F830212C03Rik-201ENSMUST00000191701 2285 ntBASIC4.63□□□□□ -1.67
Syne1Q6ZWR6 Adck5-214ENSMUST00000162503 2040 ntAPPRIS P1 TSL 5 BASIC4.63□□□□□ -1.67
Syne1Q6ZWR6 Bach2os-201ENSMUST00000126225 1661 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
Syne1Q6ZWR6 Gm43818-201ENSMUST00000200605 466 ntBASIC4.63□□□□□ -1.67
Syne1Q6ZWR6 Ctu2-201ENSMUST00000116412 3066 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
Syne1Q6ZWR6 Kmt5b-206ENSMUST00000113973 6130 ntAPPRIS ALT2 TSL 5 BASIC4.63□□□□□ -1.67
Syne1Q6ZWR6 Tmf1-201ENSMUST00000095664 5732 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
Syne1Q6ZWR6 C130050O18Rik-201ENSMUST00000052176 1532 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
Syne1Q6ZWR6 Ankra2-208ENSMUST00000226100 1476 ntBASIC4.63□□□□□ -1.67
Syne1Q6ZWR6 Klf7-201ENSMUST00000055001 1477 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
Syne1Q6ZWR6 Csf1-201ENSMUST00000014743 4176 ntAPPRIS P3 TSL 1 (best) BASIC4.63□□□□□ -1.67
Syne1Q6ZWR6 Gm10863-204ENSMUST00000147620 776 ntTSL 3 BASIC4.63□□□□□ -1.67
Syne1Q6ZWR6 Gm6222-202ENSMUST00000182143 629 ntBASIC4.63□□□□□ -1.67
Syne1Q6ZWR6 Spata33-205ENSMUST00000212523 486 ntTSL 3 BASIC4.63□□□□□ -1.67
Syne1Q6ZWR6 AC165254.1-201ENSMUST00000220736 599 ntTSL 5 BASIC4.63□□□□□ -1.67
Syne1Q6ZWR6 Tex26-201ENSMUST00000031667 1137 ntAPPRIS ALT2 TSL 1 (best) BASIC4.63□□□□□ -1.67
Syne1Q6ZWR6 Dhx30-201ENSMUST00000062368 3806 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
Syne1Q6ZWR6 Rhox2a-201ENSMUST00000063340 795 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
Syne1Q6ZWR6 Cryba4-201ENSMUST00000086629 746 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
Syne1Q6ZWR6 Cryge-201ENSMUST00000087359 631 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
Syne1Q6ZWR6 Kcnk2-202ENSMUST00000110920 3572 ntAPPRIS ALT1 TSL 5 BASIC4.63□□□□□ -1.67
Syne1Q6ZWR6 Hdgfl1-201ENSMUST00000055915 1993 ntAPPRIS P1 BASIC4.63□□□□□ -1.67
Syne1Q6ZWR6 Btbd11-203ENSMUST00000105307 5788 ntAPPRIS P3 TSL 1 (best) BASIC4.63□□□□□ -1.67
Syne1Q6ZWR6 Mrpl58-209ENSMUST00000153983 2596 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
Syne1Q6ZWR6 Rbbp7-201ENSMUST00000033720 2244 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
Syne1Q6ZWR6 Gm9742-201ENSMUST00000165220 1553 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
Syne1Q6ZWR6 Pcna-201ENSMUST00000028817 1518 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
Syne1Q6ZWR6 Nsd3-203ENSMUST00000136107 3818 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
Syne1Q6ZWR6 Cpne1-203ENSMUST00000109608 3492 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
Syne1Q6ZWR6 Gm12585-201ENSMUST00000117307 290 ntBASIC4.63□□□□□ -1.67
Syne1Q6ZWR6 1700080E11Rik-202ENSMUST00000190661 682 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
Syne1Q6ZWR6 Gm15411-202ENSMUST00000201913 668 ntTSL 3 BASIC4.63□□□□□ -1.67
Syne1Q6ZWR6 Gm18473-201ENSMUST00000220543 868 ntBASIC4.63□□□□□ -1.67
Syne1Q6ZWR6 AC154462.2-201ENSMUST00000227519 370 ntBASIC4.63□□□□□ -1.67
Syne1Q6ZWR6 Dennd6b-201ENSMUST00000078953 4607 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
Syne1Q6ZWR6 Dna2-203ENSMUST00000131422 4122 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
Syne1Q6ZWR6 Clcnka-202ENSMUST00000105790 2511 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
Syne1Q6ZWR6 H3f3b-202ENSMUST00000106454 2514 ntAPPRIS P1 TSL 5 BASIC4.63□□□□□ -1.67
Syne1Q6ZWR6 AC114543.1-201ENSMUST00000226451 1558 ntBASIC4.63□□□□□ -1.67
Syne1Q6ZWR6 Tnrc18-201ENSMUST00000151477 6487 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
Syne1Q6ZWR6 Gm5779-202ENSMUST00000219564 1477 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
Syne1Q6ZWR6 Tmtc2-201ENSMUST00000061506 5629 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
Syne1Q6ZWR6 Snph-201ENSMUST00000028951 4730 ntAPPRIS P3 TSL 1 (best) BASIC4.63□□□□□ -1.67
Retrieved 100 of 76,532 protein–RNA pairs in 30.5 ms