Protein–RNA interactions for Protein: Q6PDQ2

Chd4, Chromodomain-helicase-DNA-binding protein 4, mousemouse

Known RBP Predictions only

Length 1,915 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd4Q6PDQ2 Ak1-202ENSMUST00000113277 2063 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Chd4Q6PDQ2 Dimt1-201ENSMUST00000022203 2051 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Chd4Q6PDQ2 Tars2-202ENSMUST00000074339 2313 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Chd4Q6PDQ2 Gtf3c5-202ENSMUST00000113889 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Chd4Q6PDQ2 Usp18-201ENSMUST00000032198 1771 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Chd4Q6PDQ2 Slc5a6-202ENSMUST00000114668 3436 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Chd4Q6PDQ2 Gclm-201ENSMUST00000029769 5589 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Chd4Q6PDQ2 Actc1-201ENSMUST00000090269 1473 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Chd4Q6PDQ2 Srr-204ENSMUST00000121738 3183 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Chd4Q6PDQ2 Zfp422-202ENSMUST00000079749 3187 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Chd4Q6PDQ2 Eif3i-201ENSMUST00000102593 1123 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Chd4Q6PDQ2 Gm14381-201ENSMUST00000122105 414 ntBASIC17.47■□□□□ 0.39
Chd4Q6PDQ2 Atp6v0e-201ENSMUST00000015719 794 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Chd4Q6PDQ2 Smim17-203ENSMUST00000161855 664 ntAPPRIS P1 TSL 3 BASIC17.47■□□□□ 0.39
Chd4Q6PDQ2 5330425B07Rik-201ENSMUST00000196714 1027 ntBASIC17.47■□□□□ 0.39
Chd4Q6PDQ2 Gm4598-201ENSMUST00000206756 1080 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Chd4Q6PDQ2 AC135669.1-202ENSMUST00000216742 540 ntBASIC17.47■□□□□ 0.39
Chd4Q6PDQ2 Lypd2-201ENSMUST00000023260 513 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Chd4Q6PDQ2 Gm9843-201ENSMUST00000052867 504 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
Chd4Q6PDQ2 Zfp146-201ENSMUST00000062181 2029 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Chd4Q6PDQ2 Agap1-204ENSMUST00000190096 4078 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Chd4Q6PDQ2 Midn-202ENSMUST00000099492 3597 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
Chd4Q6PDQ2 Lzts1-201ENSMUST00000037049 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Chd4Q6PDQ2 Elovl3-201ENSMUST00000043739 1494 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Chd4Q6PDQ2 Osgepl1-201ENSMUST00000027265 1868 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Chd4Q6PDQ2 Ccdc155-201ENSMUST00000121017 2262 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Chd4Q6PDQ2 Ppfibp1-201ENSMUST00000016631 4851 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
Chd4Q6PDQ2 Fam169b-202ENSMUST00000125685 2821 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Chd4Q6PDQ2 Ppp2r2b-203ENSMUST00000120632 2081 ntAPPRIS ALT1 TSL 5 BASIC17.46■□□□□ 0.39
Chd4Q6PDQ2 Gm25214-201ENSMUST00000104573 129 ntBASIC17.46■□□□□ 0.39
Chd4Q6PDQ2 Qdpr-203ENSMUST00000118097 1232 ntTSL 5 BASIC17.46■□□□□ 0.39
Chd4Q6PDQ2 Pcbd1-201ENSMUST00000020298 789 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Chd4Q6PDQ2 Tatdn3-201ENSMUST00000027945 1196 ntAPPRIS ALT2 TSL 3 BASIC17.46■□□□□ 0.39
Chd4Q6PDQ2 Itln1-201ENSMUST00000043094 1141 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Chd4Q6PDQ2 1700088E04Rik-212ENSMUST00000190959 1403 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
Chd4Q6PDQ2 Nanos1-201ENSMUST00000088237 3927 ntAPPRIS P1 BASIC17.46■□□□□ 0.39
Chd4Q6PDQ2 8430408G22Rik-201ENSMUST00000067354 1339 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Chd4Q6PDQ2 Enpp5-203ENSMUST00000154166 2490 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
Chd4Q6PDQ2 Pim1-201ENSMUST00000024811 2638 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
Chd4Q6PDQ2 Apba1-201ENSMUST00000025830 6632 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
Chd4Q6PDQ2 Brinp1-201ENSMUST00000030036 3212 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
Chd4Q6PDQ2 Dusp15-203ENSMUST00000123121 2993 ntAPPRIS P1 TSL 3 BASIC17.45■□□□□ 0.38
Chd4Q6PDQ2 Hnrnpd-211ENSMUST00000172361 6811 ntAPPRIS P4 TSL 1 (best) BASIC17.45■□□□□ 0.38
Chd4Q6PDQ2 Gm12291-201ENSMUST00000121627 311 ntBASIC17.45■□□□□ 0.38
Chd4Q6PDQ2 2210406O10Rik-202ENSMUST00000122882 1743 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Chd4Q6PDQ2 Gm14597-202ENSMUST00000129769 715 ntAPPRIS P5 TSL 3 BASIC17.45■□□□□ 0.38
Chd4Q6PDQ2 1700003G18Rik-201ENSMUST00000140689 633 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Chd4Q6PDQ2 Prr13-204ENSMUST00000164957 1055 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Chd4Q6PDQ2 Gm27320-201ENSMUST00000184892 109 ntBASIC17.45■□□□□ 0.38
Chd4Q6PDQ2 Hax1-206ENSMUST00000197786 857 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Chd4Q6PDQ2 Gm30459-201ENSMUST00000206203 1193 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Chd4Q6PDQ2 AC155637.1-201ENSMUST00000218560 636 ntBASIC17.45■□□□□ 0.38
Chd4Q6PDQ2 AC153506.3-201ENSMUST00000219287 1029 ntTSL 5 BASIC17.45■□□□□ 0.38
Chd4Q6PDQ2 Fetub-201ENSMUST00000023587 1573 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Chd4Q6PDQ2 Rhox2a-201ENSMUST00000063340 795 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Chd4Q6PDQ2 Zfp839-201ENSMUST00000170060 3723 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Chd4Q6PDQ2 Cxcl16-201ENSMUST00000019064 2699 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Chd4Q6PDQ2 C030005K06Rik-201ENSMUST00000129164 2076 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Chd4Q6PDQ2 Gm3287-205ENSMUST00000228893 1332 ntBASIC17.45■□□□□ 0.38
Chd4Q6PDQ2 Commd7-201ENSMUST00000071852 3210 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Chd4Q6PDQ2 5033426O07Rik-202ENSMUST00000212635 2110 ntTSL 5 BASIC17.45■□□□□ 0.38
Chd4Q6PDQ2 Obsl1-202ENSMUST00000113567 5679 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Chd4Q6PDQ2 Rbm15b-201ENSMUST00000055843 6511 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
Chd4Q6PDQ2 Gm7993-201ENSMUST00000200970 1384 ntBASIC17.45■□□□□ 0.38
Chd4Q6PDQ2 Rpe-201ENSMUST00000027157 2692 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Chd4Q6PDQ2 Cc2d1b-201ENSMUST00000030320 3303 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Chd4Q6PDQ2 Cnih4-203ENSMUST00000111059 3127 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Chd4Q6PDQ2 Gm24255-201ENSMUST00000104481 128 ntBASIC17.45■□□□□ 0.38
Chd4Q6PDQ2 Park7-202ENSMUST00000105673 919 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
Chd4Q6PDQ2 Gm9004-201ENSMUST00000218739 1222 ntBASIC17.45■□□□□ 0.38
Chd4Q6PDQ2 H2-M10.2-201ENSMUST00000023845 1113 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Chd4Q6PDQ2 Trem3-201ENSMUST00000048065 994 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Chd4Q6PDQ2 Cma2-201ENSMUST00000089555 947 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Chd4Q6PDQ2 Itsn1-201ENSMUST00000056482 5364 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Chd4Q6PDQ2 Ankmy2-201ENSMUST00000041640 2456 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Chd4Q6PDQ2 Snx10-201ENSMUST00000049152 2480 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Chd4Q6PDQ2 Wdr25-206ENSMUST00000221510 1600 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Chd4Q6PDQ2 Axdnd1-204ENSMUST00000178036 3586 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
Chd4Q6PDQ2 Rimbp3-201ENSMUST00000169803 5787 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
Chd4Q6PDQ2 Gm13111-201ENSMUST00000136217 3542 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Chd4Q6PDQ2 Akr1b3-201ENSMUST00000102980 1387 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Chd4Q6PDQ2 Ormdl1-201ENSMUST00000027266 1910 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Chd4Q6PDQ2 Gm9954-202ENSMUST00000198686 4725 ntBASIC17.44■□□□□ 0.38
Chd4Q6PDQ2 Bmpr1a-201ENSMUST00000049005 5956 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Chd4Q6PDQ2 Tfap2c-206ENSMUST00000170744 2776 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Chd4Q6PDQ2 Hoxd3-203ENSMUST00000111983 2968 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Chd4Q6PDQ2 Gm43738-201ENSMUST00000200659 2635 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
Chd4Q6PDQ2 Rpl19-ps12-201ENSMUST00000121251 591 ntBASIC17.44■□□□□ 0.38
Chd4Q6PDQ2 Gm13850-201ENSMUST00000140465 623 ntTSL 3 BASIC17.44■□□□□ 0.38
Chd4Q6PDQ2 Iqcf6-201ENSMUST00000171091 537 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
Chd4Q6PDQ2 Grp-203ENSMUST00000173985 952 ntAPPRIS P2 TSL 5 BASIC17.44■□□□□ 0.38
Chd4Q6PDQ2 Tmem176b-209ENSMUST00000204073 986 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
Chd4Q6PDQ2 Egr2-203ENSMUST00000127820 2665 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
Chd4Q6PDQ2 Mpv17-201ENSMUST00000154241 1724 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
Chd4Q6PDQ2 Cops7a-202ENSMUST00000112439 1328 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Chd4Q6PDQ2 Stxbp1-202ENSMUST00000077458 3616 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Chd4Q6PDQ2 Abl1-201ENSMUST00000028190 5794 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
Chd4Q6PDQ2 Fam199x-201ENSMUST00000047852 8299 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Chd4Q6PDQ2 Bcat1-202ENSMUST00000048252 1642 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Chd4Q6PDQ2 Cldn18-204ENSMUST00000136429 1409 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Retrieved 100 of 76,532 protein–RNA pairs in 40 ms