Protein–RNA interactions for Protein: Q64739

Col11a2, Collagen alpha-2(XI) chain, mousemouse

Predictions only

Length 1,736 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col11a2Q64739 Repin1-204ENSMUST00000135151 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Col11a2Q64739 Rarg-201ENSMUST00000043172 2953 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
Col11a2Q64739 Ap2a2-201ENSMUST00000003038 4646 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Col11a2Q64739 Ormdl1-201ENSMUST00000027266 1910 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Col11a2Q64739 Tpm1-207ENSMUST00000113687 962 ntTSL 5 BASIC16.14■□□□□ 0.17
Col11a2Q64739 Pom121l12-201ENSMUST00000117584 1039 ntAPPRIS P1 BASIC16.14■□□□□ 0.17
Col11a2Q64739 2810039B14Rik-206ENSMUST00000185040 1113 ntBASIC16.14■□□□□ 0.17
Col11a2Q64739 Acsm5-207ENSMUST00000207813 1084 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Col11a2Q64739 Gm42067-201ENSMUST00000209642 647 ntTSL 2 BASIC16.14■□□□□ 0.17
Col11a2Q64739 Rpl17-ps3-201ENSMUST00000221295 556 ntBASIC16.14■□□□□ 0.17
Col11a2Q64739 Olfr398-201ENSMUST00000053874 945 ntAPPRIS P1 BASIC16.14■□□□□ 0.17
Col11a2Q64739 Adm2-201ENSMUST00000066991 1043 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Col11a2Q64739 Olfr887-201ENSMUST00000074681 930 ntAPPRIS P1 BASIC16.14■□□□□ 0.17
Col11a2Q64739 Ikzf1-201ENSMUST00000018798 1542 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Col11a2Q64739 Hes2-201ENSMUST00000030782 2521 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Col11a2Q64739 Atp10a-201ENSMUST00000168747 5419 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Col11a2Q64739 Me2-201ENSMUST00000025439 2455 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Col11a2Q64739 Gjb5-201ENSMUST00000046498 1721 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Col11a2Q64739 AC122371.1-201ENSMUST00000220876 1477 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Col11a2Q64739 Gm43273-201ENSMUST00000199649 2594 ntBASIC16.13■□□□□ 0.17
Col11a2Q64739 Pkp3-202ENSMUST00000106039 2919 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Col11a2Q64739 Washc1-201ENSMUST00000072383 2904 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Col11a2Q64739 Brsk1-202ENSMUST00000120836 2867 ntTSL 5 BASIC16.13■□□□□ 0.17
Col11a2Q64739 Srsf10-204ENSMUST00000105853 3058 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
Col11a2Q64739 Ece2-201ENSMUST00000003898 3152 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
Col11a2Q64739 Ablim2-205ENSMUST00000114205 2579 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
Col11a2Q64739 Ifngr2-201ENSMUST00000023687 3254 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Col11a2Q64739 Ptgfrn-201ENSMUST00000102694 5902 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Col11a2Q64739 Gm13736-201ENSMUST00000119272 253 ntBASIC16.13■□□□□ 0.17
Col11a2Q64739 Gm23699-201ENSMUST00000158835 135 ntBASIC16.13■□□□□ 0.17
Col11a2Q64739 Pmvk-203ENSMUST00000184515 1156 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Col11a2Q64739 Gm37835-201ENSMUST00000193305 361 ntBASIC16.13■□□□□ 0.17
Col11a2Q64739 AU022133-201ENSMUST00000200601 873 ntBASIC16.13■□□□□ 0.17
Col11a2Q64739 Gm44545-201ENSMUST00000208262 746 ntBASIC16.13■□□□□ 0.17
Col11a2Q64739 Cacng1-201ENSMUST00000021065 1249 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Col11a2Q64739 Syngr4-201ENSMUST00000039049 967 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Col11a2Q64739 Asphd1-201ENSMUST00000052937 730 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
Col11a2Q64739 Tbc1d9-201ENSMUST00000034145 4631 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Col11a2Q64739 Serinc1-201ENSMUST00000020027 2880 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Col11a2Q64739 Gm43081-201ENSMUST00000199082 1380 ntBASIC16.13■□□□□ 0.17
Col11a2Q64739 Rnf214-205ENSMUST00000160699 2287 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
Col11a2Q64739 Crk-201ENSMUST00000017920 3642 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Col11a2Q64739 Rhobtb3-201ENSMUST00000022078 4980 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Col11a2Q64739 Sqle-201ENSMUST00000022977 2758 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Col11a2Q64739 Sptbn4-201ENSMUST00000011895 8747 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Col11a2Q64739 Arl6ip6-201ENSMUST00000028336 2548 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Col11a2Q64739 Snx22-201ENSMUST00000044711 2543 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Col11a2Q64739 Clstn2-201ENSMUST00000035027 4365 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Col11a2Q64739 Cct3-ps1-201ENSMUST00000118023 1647 ntBASIC16.12■□□□□ 0.17
Col11a2Q64739 Gm35721-201ENSMUST00000220294 2014 ntTSL 5 BASIC16.12■□□□□ 0.17
Col11a2Q64739 Tchp-201ENSMUST00000094441 2882 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Col11a2Q64739 Gltp-202ENSMUST00000112212 799 ntTSL 5 BASIC16.12■□□□□ 0.17
Col11a2Q64739 Mrpl2-202ENSMUST00000113429 998 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Col11a2Q64739 Rap1a-ps2-201ENSMUST00000118467 559 ntBASIC16.12■□□□□ 0.17
Col11a2Q64739 Pabpc1l2a-ps-201ENSMUST00000128361 513 ntBASIC16.12■□□□□ 0.17
Col11a2Q64739 1700003G13Rik-202ENSMUST00000131342 705 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Col11a2Q64739 Dnajc25-204ENSMUST00000152199 1141 ntTSL 5 BASIC16.12■□□□□ 0.17
Col11a2Q64739 1700031P21Rik-203ENSMUST00000191400 466 ntTSL 3 BASIC16.12■□□□□ 0.17
Col11a2Q64739 Gm38092-201ENSMUST00000195600 653 ntBASIC16.12■□□□□ 0.17
Col11a2Q64739 AC110091.1-201ENSMUST00000216004 691 ntTSL 3 BASIC16.12■□□□□ 0.17
Col11a2Q64739 Dhrs4-202ENSMUST00000226168 828 ntBASIC16.12■□□□□ 0.17
Col11a2Q64739 Tmem116-201ENSMUST00000031405 1288 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Col11a2Q64739 Ikzf5-202ENSMUST00000121033 2231 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Col11a2Q64739 Itga6-201ENSMUST00000028522 4310 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
Col11a2Q64739 Dnm1l-203ENSMUST00000115749 4068 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Col11a2Q64739 Dnm1l-202ENSMUST00000096229 4056 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Col11a2Q64739 Mapk7-201ENSMUST00000079080 3019 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Col11a2Q64739 Sart3-201ENSMUST00000019118 4447 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Col11a2Q64739 Gtf2f1-201ENSMUST00000002733 1717 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Col11a2Q64739 Mid1-215ENSMUST00000171433 2546 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
Col11a2Q64739 Arhgap10-201ENSMUST00000076316 3084 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Col11a2Q64739 Prickle3-203ENSMUST00000129662 2376 ntAPPRIS ALT2 TSL 2 BASIC16.11■□□□□ 0.17
Col11a2Q64739 Card9-201ENSMUST00000028294 1880 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
Col11a2Q64739 Elk3-201ENSMUST00000008542 4212 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Col11a2Q64739 Gm6890-201ENSMUST00000114117 776 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
Col11a2Q64739 Rpl28-ps1-201ENSMUST00000121497 414 ntBASIC16.11■□□□□ 0.17
Col11a2Q64739 Gm12208-201ENSMUST00000122004 163 ntBASIC16.11■□□□□ 0.17
Col11a2Q64739 Gm10051-201ENSMUST00000145209 414 ntBASIC16.11■□□□□ 0.17
Col11a2Q64739 Gm16036-201ENSMUST00000150385 1112 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Col11a2Q64739 1110038B12Rik-203ENSMUST00000173070 434 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Col11a2Q64739 Ighv8-4-201ENSMUST00000178949 294 ntAPPRIS P1 BASIC16.11■□□□□ 0.17
Col11a2Q64739 Hcfc1r1-203ENSMUST00000180140 693 ntAPPRIS P2 TSL 2 BASIC16.11■□□□□ 0.17
Col11a2Q64739 S100a3-204ENSMUST00000200290 509 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Col11a2Q64739 Gm43050-201ENSMUST00000201062 338 ntTSL 2 BASIC16.11■□□□□ 0.17
Col11a2Q64739 Gm44136-201ENSMUST00000203819 1106 ntBASIC16.11■□□□□ 0.17
Col11a2Q64739 Gm29961-201ENSMUST00000214692 644 ntTSL 5 BASIC16.11■□□□□ 0.17
Col11a2Q64739 Zfp706-203ENSMUST00000226453 517 ntAPPRIS P1 BASIC16.11■□□□□ 0.17
Col11a2Q64739 Cryab-201ENSMUST00000034562 946 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Col11a2Q64739 9130017K11Rik-202ENSMUST00000135670 3338 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Col11a2Q64739 Prkar2b-202ENSMUST00000036497 3378 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Col11a2Q64739 Derl1-201ENSMUST00000022993 3175 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Col11a2Q64739 Slc27a4-201ENSMUST00000080065 4054 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Col11a2Q64739 Slc20a2-201ENSMUST00000067786 3566 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Col11a2Q64739 Syt7-203ENSMUST00000169121 6834 ntTSL 5 BASIC16.11■□□□□ 0.17
Col11a2Q64739 AC126444.1-201ENSMUST00000225938 1768 ntBASIC16.11■□□□□ 0.17
Col11a2Q64739 Notch4-201ENSMUST00000015612 6591 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Col11a2Q64739 Rgs3-204ENSMUST00000107420 2752 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Col11a2Q64739 Cdkl3-201ENSMUST00000063303 2765 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
Col11a2Q64739 Rad9a-201ENSMUST00000025740 2046 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Col11a2Q64739 Gpsm1-202ENSMUST00000066936 3384 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 36.5 ms