Protein–RNA interactions for Protein: Q60803

Traf3, TNF receptor-associated factor 3, mousemouse

Predictions only

Length 567 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Traf3Q60803 Gm2420-202ENSMUST00000202224 2249 ntBASIC14.27□□□□□ -0.12
Traf3Q60803 Litaf-201ENSMUST00000023143 2235 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Traf3Q60803 Jazf1-201ENSMUST00000074541 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Traf3Q60803 Pfkfb3-212ENSMUST00000170196 2163 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Traf3Q60803 Kyat1-204ENSMUST00000113661 2057 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Traf3Q60803 Arl11-202ENSMUST00000224727 2095 ntAPPRIS P1 BASIC14.27□□□□□ -0.12
Traf3Q60803 Adck5-207ENSMUST00000160784 1998 ntTSL 5 BASIC14.27□□□□□ -0.12
Traf3Q60803 Sgce-205ENSMUST00000115579 1696 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Traf3Q60803 AC139350.1-201ENSMUST00000227064 1594 ntBASIC14.27□□□□□ -0.12
Traf3Q60803 Slc22a15-207ENSMUST00000190824 3010 ntTSL 5 BASIC14.27□□□□□ -0.12
Traf3Q60803 Mylk2-201ENSMUST00000028970 2951 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Traf3Q60803 Dbndd1-203ENSMUST00000177240 1463 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Traf3Q60803 Poli-205ENSMUST00000161542 2736 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Traf3Q60803 Lzts3-203ENSMUST00000110260 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Traf3Q60803 Akirin1-ps-201ENSMUST00000119676 458 ntBASIC14.27□□□□□ -0.13
Traf3Q60803 Gm12840-201ENSMUST00000156081 627 ntTSL 5 BASIC14.27□□□□□ -0.13
Traf3Q60803 Rab10os-207ENSMUST00000179924 823 ntTSL 5 BASIC14.27□□□□□ -0.13
Traf3Q60803 Mir7654-201ENSMUST00000185082 70 ntBASIC14.27□□□□□ -0.13
Traf3Q60803 Platr12-202ENSMUST00000189722 549 ntTSL 3 BASIC14.27□□□□□ -0.13
Traf3Q60803 2410004P03Rik-203ENSMUST00000190691 953 ntTSL 2 BASIC14.27□□□□□ -0.13
Traf3Q60803 Fcrl1-204ENSMUST00000191666 925 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Traf3Q60803 Gm5069-202ENSMUST00000192714 1011 ntBASIC14.27□□□□□ -0.13
Traf3Q60803 Ccdc159-204ENSMUST00000216710 1126 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.13
Traf3Q60803 AC155286.1-201ENSMUST00000218632 448 ntBASIC14.27□□□□□ -0.13
Traf3Q60803 Rpl28-201ENSMUST00000032597 1106 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Traf3Q60803 Aspm-205ENSMUST00000200083 6072 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Traf3Q60803 Taok2-201ENSMUST00000071268 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Traf3Q60803 Mbp-203ENSMUST00000075372 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Traf3Q60803 Dmtn-202ENSMUST00000022695 4080 ntTSL 5 BASIC14.27□□□□□ -0.13
Traf3Q60803 Klf12-201ENSMUST00000097079 1856 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Traf3Q60803 Gpr137b-202ENSMUST00000220628 3634 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Traf3Q60803 Sufu-203ENSMUST00000118440 2663 ntTSL 5 BASIC14.27□□□□□ -0.13
Traf3Q60803 Egr2-203ENSMUST00000127820 2665 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.13
Traf3Q60803 Skida1-202ENSMUST00000091420 4376 ntAPPRIS P2 TSL 5 BASIC14.27□□□□□ -0.13
Traf3Q60803 Elf4-202ENSMUST00000114958 6088 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Traf3Q60803 Robo4-205ENSMUST00000214185 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Traf3Q60803 Cln3-203ENSMUST00000098036 1571 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Traf3Q60803 Tmem55a-201ENSMUST00000029875 2339 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Traf3Q60803 Dlgap3-201ENSMUST00000046659 3884 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Traf3Q60803 Kcnq1-202ENSMUST00000185383 1535 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Traf3Q60803 Asb10-202ENSMUST00000117900 1432 ntTSL 5 BASIC14.26□□□□□ -0.13
Traf3Q60803 Plcd1-203ENSMUST00000214470 2706 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Traf3Q60803 Gtf3c5-201ENSMUST00000028157 2739 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
Traf3Q60803 Tfe3-211ENSMUST00000137467 3390 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Traf3Q60803 Bnc2-215ENSMUST00000176691 3385 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Traf3Q60803 Zkscan7-202ENSMUST00000215872 4035 ntTSL 5 BASIC14.26□□□□□ -0.13
Traf3Q60803 Gm11978-202ENSMUST00000127510 1303 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Traf3Q60803 Gm30238-201ENSMUST00000195528 2603 ntBASIC14.26□□□□□ -0.13
Traf3Q60803 Cd63-202ENSMUST00000105229 1043 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Traf3Q60803 Gosr2-202ENSMUST00000107013 1044 ntTSL 2 BASIC14.26□□□□□ -0.13
Traf3Q60803 Gm15678-201ENSMUST00000117573 960 ntBASIC14.26□□□□□ -0.13
Traf3Q60803 Gm14928-201ENSMUST00000120198 477 ntBASIC14.26□□□□□ -0.13
Traf3Q60803 Gm12416-201ENSMUST00000120911 1008 ntBASIC14.26□□□□□ -0.13
Traf3Q60803 Rab15-204ENSMUST00000122419 856 ntTSL 5 BASIC14.26□□□□□ -0.13
Traf3Q60803 Gm43691-201ENSMUST00000196625 697 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Traf3Q60803 Cd63-204ENSMUST00000219317 1109 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
Traf3Q60803 Ndufs6-201ENSMUST00000022097 568 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Traf3Q60803 Gm17330-201ENSMUST00000221047 165 ntBASIC14.26□□□□□ -0.13
Traf3Q60803 Fuom-201ENSMUST00000026539 685 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Traf3Q60803 Gm6180-201ENSMUST00000065243 498 ntBASIC14.26□□□□□ -0.13
Traf3Q60803 Slc16a13-201ENSMUST00000060010 2531 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Traf3Q60803 Flt3-201ENSMUST00000049324 3657 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Traf3Q60803 Tbx3-201ENSMUST00000018748 4856 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Traf3Q60803 Mark2-201ENSMUST00000025921 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Traf3Q60803 Pip5k1c-210ENSMUST00000163075 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Traf3Q60803 1300017J02Rik-201ENSMUST00000035163 2284 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Traf3Q60803 Uba3-201ENSMUST00000089287 2257 ntAPPRIS P4 TSL 1 (best) BASIC14.26□□□□□ -0.13
Traf3Q60803 Lrrc7-205ENSMUST00000200137 7321 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Traf3Q60803 Gins2-201ENSMUST00000034278 3900 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Traf3Q60803 Il12rb1-205ENSMUST00000212657 2741 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
Traf3Q60803 Dnajc5g-201ENSMUST00000066544 1565 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
Traf3Q60803 Gm14752-201ENSMUST00000120719 2075 ntBASIC14.26□□□□□ -0.13
Traf3Q60803 Tmem30a-202ENSMUST00000120690 3627 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
Traf3Q60803 Setd1b-204ENSMUST00000163030 8857 ntAPPRIS P2 TSL 5 BASIC14.25□□□□□ -0.13
Traf3Q60803 Paqr8-202ENSMUST00000167119 1472 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Traf3Q60803 Kansl2-ps-201ENSMUST00000181818 1461 ntBASIC14.25□□□□□ -0.13
Traf3Q60803 Psmd11-201ENSMUST00000017572 2848 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Traf3Q60803 Creg2-201ENSMUST00000053355 6091 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Traf3Q60803 Fam71f1-204ENSMUST00000166462 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Traf3Q60803 Haus7-201ENSMUST00000033737 1380 ntAPPRIS P4 TSL 1 (best) BASIC14.25□□□□□ -0.13
Traf3Q60803 F830212C03Rik-201ENSMUST00000191701 2285 ntBASIC14.25□□□□□ -0.13
Traf3Q60803 Ssh3-202ENSMUST00000113852 2735 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Traf3Q60803 Ssh3-201ENSMUST00000037992 2728 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Traf3Q60803 Mib2-201ENSMUST00000103176 3642 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Traf3Q60803 Prkx-202ENSMUST00000114044 2639 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Traf3Q60803 Acin1-201ENSMUST00000022793 4735 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
Traf3Q60803 Ndufa13-201ENSMUST00000110167 1251 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Traf3Q60803 Gm12537-201ENSMUST00000119266 1002 ntBASIC14.25□□□□□ -0.13
Traf3Q60803 Gm12070-201ENSMUST00000119551 1002 ntBASIC14.25□□□□□ -0.13
Traf3Q60803 Gm12671-201ENSMUST00000119978 1002 ntBASIC14.25□□□□□ -0.13
Traf3Q60803 Gm13292-201ENSMUST00000120014 1000 ntBASIC14.25□□□□□ -0.13
Traf3Q60803 Gm12403-201ENSMUST00000121384 959 ntBASIC14.25□□□□□ -0.13
Traf3Q60803 Atp5j2-202ENSMUST00000161741 955 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Traf3Q60803 Zfp414-204ENSMUST00000166627 1211 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Traf3Q60803 Gm10359-201ENSMUST00000180167 1002 ntBASIC14.25□□□□□ -0.13
Traf3Q60803 Gm12033-201ENSMUST00000180654 1002 ntBASIC14.25□□□□□ -0.13
Traf3Q60803 Gm5559-201ENSMUST00000180755 1002 ntBASIC14.25□□□□□ -0.13
Traf3Q60803 Gm4335-201ENSMUST00000182581 1004 ntBASIC14.25□□□□□ -0.13
Traf3Q60803 Smyd3-207ENSMUST00000194237 1047 ntTSL 2 BASIC14.25□□□□□ -0.13
Traf3Q60803 Gm18307-201ENSMUST00000206864 949 ntBASIC14.25□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 32.4 ms