Protein–RNA interactions for Protein: Q60649

Clpb, Caseinolytic peptidase B protein homolog, mousemouse

Predictions only

Length 677 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ClpbQ60649 AC154846.1-201ENSMUST00000226278 862 ntBASIC13.11□□□□□ -0.31
ClpbQ60649 Epo-201ENSMUST00000031723 715 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
ClpbQ60649 Gm11149-201ENSMUST00000068730 1250 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
ClpbQ60649 Nrxn1-207ENSMUST00000160844 9309 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
ClpbQ60649 Tmem163-205ENSMUST00000185560 3488 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
ClpbQ60649 Uhrf1bp1l-201ENSMUST00000020112 6448 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
ClpbQ60649 Mpzl2-201ENSMUST00000034600 3107 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
ClpbQ60649 Rabep2-201ENSMUST00000106405 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
ClpbQ60649 Clcn4-203ENSMUST00000210061 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
ClpbQ60649 Ash2l-204ENSMUST00000110610 2337 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
ClpbQ60649 Thnsl2-201ENSMUST00000074241 1821 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
ClpbQ60649 Cct6a-202ENSMUST00000201414 2454 ntTSL 5 BASIC13.11□□□□□ -0.31
ClpbQ60649 Nrd1-202ENSMUST00000102736 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
ClpbQ60649 Gm43156-201ENSMUST00000202338 2127 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
ClpbQ60649 Mocs2-208ENSMUST00000166176 1855 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
ClpbQ60649 Ppp4r3b-201ENSMUST00000020755 5125 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
ClpbQ60649 Axdnd1-204ENSMUST00000178036 3586 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
ClpbQ60649 Camk2b-203ENSMUST00000066431 1603 ntAPPRIS ALT1 TSL 5 BASIC13.1□□□□□ -0.31
ClpbQ60649 Pik3cd-214ENSMUST00000177654 4765 ntAPPRIS P4 TSL 5 BASIC13.1□□□□□ -0.31
ClpbQ60649 Sox11-201ENSMUST00000079063 8311 ntAPPRIS P1 BASIC13.1□□□□□ -0.31
ClpbQ60649 Pfkfb3-212ENSMUST00000170196 2163 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
ClpbQ60649 Mief1-201ENSMUST00000023048 5081 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
ClpbQ60649 Pomt2-201ENSMUST00000037788 5064 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
ClpbQ60649 Unc5b-203ENSMUST00000218637 3653 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
ClpbQ60649 Tcf3-205ENSMUST00000105341 2451 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
ClpbQ60649 Plekhb1-201ENSMUST00000079176 2079 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
ClpbQ60649 Nr2f2-201ENSMUST00000032768 4222 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
ClpbQ60649 Spaca3-202ENSMUST00000103223 947 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
ClpbQ60649 Ppcs-202ENSMUST00000106316 954 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
ClpbQ60649 Gm45799-201ENSMUST00000106785 367 ntAPPRIS ALT2 TSL 3 BASIC13.1□□□□□ -0.31
ClpbQ60649 Mrpl53-201ENSMUST00000113938 695 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
ClpbQ60649 Gm14617-202ENSMUST00000144208 607 ntTSL 3 BASIC13.1□□□□□ -0.31
ClpbQ60649 3110053B16Rik-204ENSMUST00000145605 575 ntBASIC13.1□□□□□ -0.31
ClpbQ60649 Fam219aos-201ENSMUST00000151164 708 ntTSL 2 BASIC13.1□□□□□ -0.31
ClpbQ60649 Naxd-205ENSMUST00000178721 1108 ntTSL 5 BASIC13.1□□□□□ -0.31
ClpbQ60649 Gm11214-201ENSMUST00000184252 552 ntAPPRIS P1 BASIC13.1□□□□□ -0.31
ClpbQ60649 Gm45195-201ENSMUST00000205597 1008 ntBASIC13.1□□□□□ -0.31
ClpbQ60649 1700028J19Rik-203ENSMUST00000206686 1166 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
ClpbQ60649 Gm6218-201ENSMUST00000219812 628 ntBASIC13.1□□□□□ -0.31
ClpbQ60649 Prtn3-201ENSMUST00000006679 1025 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
ClpbQ60649 Hspa12b-201ENSMUST00000099349 3413 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
ClpbQ60649 Diaph1-204ENSMUST00000115631 5741 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
ClpbQ60649 Shmt2-206ENSMUST00000219239 2238 ntAPPRIS ALT1 TSL 1 (best) BASIC13.1□□□□□ -0.31
ClpbQ60649 Ctbp1-212ENSMUST00000202962 3595 ntTSL 2 BASIC13.1□□□□□ -0.31
ClpbQ60649 Cog7-201ENSMUST00000057576 2902 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
ClpbQ60649 C130080G10Rik-203ENSMUST00000154140 1564 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
ClpbQ60649 Cyp11a1-201ENSMUST00000034874 2120 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
ClpbQ60649 Gtf3c5-202ENSMUST00000113889 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
ClpbQ60649 Gan-201ENSMUST00000064488 2652 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
ClpbQ60649 Gigyf2-201ENSMUST00000027475 5724 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
ClpbQ60649 1500015A07Rik-201ENSMUST00000184181 1865 ntBASIC13.1□□□□□ -0.31
ClpbQ60649 Ankrd34a-201ENSMUST00000058943 2583 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
ClpbQ60649 Pcdha6-202ENSMUST00000193777 5367 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
ClpbQ60649 Poli-205ENSMUST00000161542 2736 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
ClpbQ60649 Stau2-215ENSMUST00000162435 2735 ntTSL 5 BASIC13.1□□□□□ -0.31
ClpbQ60649 Gtf3c5-201ENSMUST00000028157 2739 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
ClpbQ60649 Vars-201ENSMUST00000087315 4137 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
ClpbQ60649 Usf1-208ENSMUST00000161241 2167 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
ClpbQ60649 Ddx42-201ENSMUST00000021046 4011 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
ClpbQ60649 Sirt3-210ENSMUST00000211179 1606 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
ClpbQ60649 Eno1b-201ENSMUST00000076155 1757 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
ClpbQ60649 Hnrnpa1-201ENSMUST00000036004 1918 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
ClpbQ60649 Map2k6-202ENSMUST00000100260 2088 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
ClpbQ60649 Bnc2-215ENSMUST00000176691 3385 ntAPPRIS P2 TSL 1 (best) BASIC13.09□□□□□ -0.31
ClpbQ60649 Atp2a3-203ENSMUST00000108485 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
ClpbQ60649 Pdgfc-201ENSMUST00000029652 3521 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
ClpbQ60649 Lpcat1-201ENSMUST00000022099 3675 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
ClpbQ60649 Fggy-203ENSMUST00000107091 1395 ntTSL 5 BASIC13.09□□□□□ -0.31
ClpbQ60649 Twf1-201ENSMUST00000023087 3025 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
ClpbQ60649 Palld-203ENSMUST00000121493 5445 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
ClpbQ60649 Pmvk-202ENSMUST00000107410 652 ntTSL 5 BASIC13.09□□□□□ -0.31
ClpbQ60649 Rxrg-204ENSMUST00000111386 1705 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
ClpbQ60649 Rubcn-204ENSMUST00000119810 3371 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
ClpbQ60649 Rpl34-203ENSMUST00000133802 711 ntTSL 2 BASIC13.09□□□□□ -0.31
ClpbQ60649 Inpp4a-209ENSMUST00000140264 3676 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
ClpbQ60649 Tex30-211ENSMUST00000150911 960 ntAPPRIS P1 TSL 2 BASIC13.09□□□□□ -0.31
ClpbQ60649 Gm38346-201ENSMUST00000192379 2639 ntBASIC13.09□□□□□ -0.31
ClpbQ60649 Gm37714-201ENSMUST00000194742 342 ntBASIC13.09□□□□□ -0.31
ClpbQ60649 Gtpbp10-211ENSMUST00000198799 648 ntBASIC13.09□□□□□ -0.31
ClpbQ60649 B9d2-202ENSMUST00000205325 593 ntTSL 2 BASIC13.09□□□□□ -0.31
ClpbQ60649 Tbc1d17-209ENSMUST00000207293 692 ntTSL 3 BASIC13.09□□□□□ -0.31
ClpbQ60649 Tex12-202ENSMUST00000217236 1003 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
ClpbQ60649 Crem-201ENSMUST00000025069 2931 ntTSL 5 BASIC13.09□□□□□ -0.31
ClpbQ60649 Ggt7-201ENSMUST00000029131 2614 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
ClpbQ60649 Spsb1-201ENSMUST00000038562 3092 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
ClpbQ60649 Srd5a2-201ENSMUST00000043458 854 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
ClpbQ60649 Gm9797-201ENSMUST00000052902 613 ntBASIC13.09□□□□□ -0.31
ClpbQ60649 Rtn3-203ENSMUST00000088169 1709 ntTSL 5 BASIC13.09□□□□□ -0.31
ClpbQ60649 Ccdc134-201ENSMUST00000089174 2043 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
ClpbQ60649 Polr2g-201ENSMUST00000096261 868 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
ClpbQ60649 Mllt10-203ENSMUST00000114671 5063 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
ClpbQ60649 Ext1-201ENSMUST00000077273 7663 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
ClpbQ60649 Fermt2-201ENSMUST00000045905 3293 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
ClpbQ60649 Map3k8-201ENSMUST00000025078 2507 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
ClpbQ60649 Rbm46-201ENSMUST00000048647 1794 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
ClpbQ60649 Slc38a7-204ENSMUST00000212270 3315 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
ClpbQ60649 Blzf1-202ENSMUST00000086032 1602 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
ClpbQ60649 Zbtb4-202ENSMUST00000108639 7811 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
ClpbQ60649 Ldlrad3-201ENSMUST00000058790 3833 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
ClpbQ60649 Acat2-201ENSMUST00000007005 2250 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 50.9 ms