Protein–RNA interactions for Protein: Q60611

Satb1, DNA-binding protein SATB1, mousemouse

Predictions only

Length 764 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Satb1Q60611 Gm7553-201ENSMUST00000185805 1426 ntBASIC14.16□□□□□ -0.14
Satb1Q60611 Gm4793-201ENSMUST00000067468 2616 ntTSL 2 BASIC14.16□□□□□ -0.14
Satb1Q60611 Smtnl2-202ENSMUST00000108500 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Satb1Q60611 Ablim1-209ENSMUST00000111546 2267 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
Satb1Q60611 Mis12-201ENSMUST00000048807 3003 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Satb1Q60611 Npas3-204ENSMUST00000223358 3143 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Satb1Q60611 Ebf4-202ENSMUST00000110287 2580 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
Satb1Q60611 Phactr3-202ENSMUST00000103066 2680 ntAPPRIS P4 TSL 1 (best) BASIC14.16□□□□□ -0.14
Satb1Q60611 Pom121l2-202ENSMUST00000117882 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Satb1Q60611 Snx8-205ENSMUST00000196566 1914 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
Satb1Q60611 Myh3-203ENSMUST00000165221 5994 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
Satb1Q60611 Zufsp-205ENSMUST00000218880 2005 ntTSL 5 BASIC14.16□□□□□ -0.14
Satb1Q60611 Stra8-202ENSMUST00000114997 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Satb1Q60611 Fnbp4-201ENSMUST00000013759 4691 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Satb1Q60611 Tmem109-207ENSMUST00000147699 1096 ntTSL 2 BASIC14.16□□□□□ -0.14
Satb1Q60611 Gm26083-201ENSMUST00000157904 193 ntBASIC14.16□□□□□ -0.14
Satb1Q60611 Gm17111-201ENSMUST00000169981 411 ntTSL 3 BASIC14.16□□□□□ -0.14
Satb1Q60611 1700030C10Rik-202ENSMUST00000186243 126 ntBASIC14.16□□□□□ -0.14
Satb1Q60611 Gm44364-201ENSMUST00000198368 141 ntBASIC14.16□□□□□ -0.14
Satb1Q60611 Mpv17-209ENSMUST00000202241 903 ntAPPRIS ALT1 TSL 3 BASIC14.16□□□□□ -0.14
Satb1Q60611 Efcab10-201ENSMUST00000020878 673 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Satb1Q60611 Gm9182-201ENSMUST00000217829 639 ntBASIC14.16□□□□□ -0.14
Satb1Q60611 AC134335.2-201ENSMUST00000227660 440 ntBASIC14.16□□□□□ -0.14
Satb1Q60611 Fuca2-203ENSMUST00000121465 5741 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Satb1Q60611 Atp4b-201ENSMUST00000033826 1378 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Satb1Q60611 C2cd4c-201ENSMUST00000059699 6729 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Satb1Q60611 Jakmip3-201ENSMUST00000106111 1571 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
Satb1Q60611 Ccdc90b-201ENSMUST00000032842 1596 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Satb1Q60611 Tcf21-202ENSMUST00000218002 1788 ntBASIC14.16□□□□□ -0.14
Satb1Q60611 Tbk1-201ENSMUST00000020316 3024 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Satb1Q60611 Pycr1-201ENSMUST00000026133 1861 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Satb1Q60611 Adck5-207ENSMUST00000160784 1998 ntTSL 5 BASIC14.16□□□□□ -0.14
Satb1Q60611 Pik3cd-214ENSMUST00000177654 4765 ntAPPRIS P4 TSL 5 BASIC14.16□□□□□ -0.14
Satb1Q60611 Pxdn-202ENSMUST00000122328 6614 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Satb1Q60611 Lrriq4-202ENSMUST00000108267 2387 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
Satb1Q60611 Kdm8-201ENSMUST00000033010 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Satb1Q60611 Plxnb2-202ENSMUST00000109331 6377 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
Satb1Q60611 Kcnc2-201ENSMUST00000092175 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Satb1Q60611 Syvn1-203ENSMUST00000134667 3159 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Satb1Q60611 Rasal3-204ENSMUST00000135618 3293 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
Satb1Q60611 Asb18-201ENSMUST00000086882 3862 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Satb1Q60611 4930528D03Rik-203ENSMUST00000225577 1348 ntBASIC14.15□□□□□ -0.14
Satb1Q60611 Esyt1-201ENSMUST00000026427 3981 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Satb1Q60611 Olfr322-204ENSMUST00000214392 4779 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
Satb1Q60611 Disp2-204ENSMUST00000110846 1732 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Satb1Q60611 Suv39h1-203ENSMUST00000115638 3116 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Satb1Q60611 Ankrd13b-202ENSMUST00000092892 3336 ntAPPRIS P2 TSL 5 BASIC14.15□□□□□ -0.14
Satb1Q60611 BC006965-201ENSMUST00000124028 1952 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Satb1Q60611 Chaf1b-202ENSMUST00000117099 1894 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
Satb1Q60611 Mettl2-201ENSMUST00000021030 1867 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Satb1Q60611 Prpf31-202ENSMUST00000108636 1798 ntTSL 5 BASIC14.15□□□□□ -0.14
Satb1Q60611 Pdia2-202ENSMUST00000120333 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Satb1Q60611 Pde7b-205ENSMUST00000169404 1697 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
Satb1Q60611 Chit1-201ENSMUST00000086475 1688 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Satb1Q60611 Elk4-201ENSMUST00000027696 1586 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Satb1Q60611 Gm2694-202ENSMUST00000180806 1452 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Satb1Q60611 Nyap1-201ENSMUST00000061789 3912 ntAPPRIS P3 TSL 5 BASIC14.15□□□□□ -0.14
Satb1Q60611 Lims1-203ENSMUST00000105468 1205 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Satb1Q60611 Folr1-205ENSMUST00000106986 1286 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Satb1Q60611 Gm15821-201ENSMUST00000121995 1210 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Satb1Q60611 Gm10863-204ENSMUST00000147620 776 ntTSL 3 BASIC14.15□□□□□ -0.14
Satb1Q60611 Gm17344-201ENSMUST00000171173 1159 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Satb1Q60611 Smco4-202ENSMUST00000178999 820 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Satb1Q60611 Gm43818-201ENSMUST00000200605 466 ntBASIC14.15□□□□□ -0.14
Satb1Q60611 Spc24-204ENSMUST00000216057 627 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Satb1Q60611 Ndufb3-201ENSMUST00000027193 763 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Satb1Q60611 Smco4-201ENSMUST00000045620 954 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Satb1Q60611 Tas2r137-201ENSMUST00000064932 1073 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
Satb1Q60611 Rph3al-202ENSMUST00000066504 988 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Satb1Q60611 4930513N10Rik-203ENSMUST00000145562 2803 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Satb1Q60611 Gid4-201ENSMUST00000070681 4283 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Satb1Q60611 Psmd12-201ENSMUST00000021063 1904 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Satb1Q60611 Zfp568-203ENSMUST00000148442 4005 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
Satb1Q60611 Eci2-211ENSMUST00000171229 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Satb1Q60611 Gm29374-201ENSMUST00000187198 1340 ntTSL 3 BASIC14.15□□□□□ -0.15
Satb1Q60611 Mocs1-201ENSMUST00000024797 2646 ntTSL 5 BASIC14.14□□□□□ -0.15
Satb1Q60611 Ttll11-201ENSMUST00000028248 3176 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Satb1Q60611 Kctd14-204ENSMUST00000205577 2310 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Satb1Q60611 Ptpn6-203ENSMUST00000171549 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Satb1Q60611 Cyp2d11-201ENSMUST00000170255 1590 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
Satb1Q60611 Map7d1-203ENSMUST00000122129 3249 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
Satb1Q60611 Fbxo25-201ENSMUST00000043520 2012 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
Satb1Q60611 Mif4gd-202ENSMUST00000106506 993 ntTSL 3 BASIC14.14□□□□□ -0.15
Satb1Q60611 Cabp5-202ENSMUST00000117400 1258 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Satb1Q60611 Gm2639-201ENSMUST00000156881 1297 ntBASIC14.14□□□□□ -0.15
Satb1Q60611 2010106C02Rik-201ENSMUST00000191222 660 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Satb1Q60611 Ighv1-25-201ENSMUST00000195638 345 ntBASIC14.14□□□□□ -0.15
Satb1Q60611 Gm19184-201ENSMUST00000196798 928 ntBASIC14.14□□□□□ -0.15
Satb1Q60611 AC153872.1-201ENSMUST00000199539 128 ntBASIC14.14□□□□□ -0.15
Satb1Q60611 Gm44066-201ENSMUST00000203263 519 ntTSL 3 BASIC14.14□□□□□ -0.15
Satb1Q60611 Tssc1-207ENSMUST00000222407 489 ntTSL 3 BASIC14.14□□□□□ -0.15
Satb1Q60611 Mir433-201ENSMUST00000093564 124 ntBASIC14.14□□□□□ -0.15
Satb1Q60611 Ptk7-201ENSMUST00000044442 4255 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Satb1Q60611 Nynrin-202ENSMUST00000168479 7511 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
Satb1Q60611 Nlrx1-203ENSMUST00000169651 3621 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Satb1Q60611 Emp2-201ENSMUST00000078357 3440 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Satb1Q60611 Tpm1-209ENSMUST00000113690 2890 ntTSL 3 BASIC14.14□□□□□ -0.15
Satb1Q60611 Ap4b1-204ENSMUST00000106824 2412 ntTSL 5 BASIC14.14□□□□□ -0.15
Satb1Q60611 Sgce-207ENSMUST00000126151 1522 ntTSL 5 BASIC14.14□□□□□ -0.15
Satb1Q60611 Papd5-203ENSMUST00000119033 4624 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 32.4 ms