Protein–RNA interactions for Protein: Q3UPR0

Shisa3, Protein shisa-3 homolog, mousemouse

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shisa3Q3UPR0 Mtss1-201ENSMUST00000080371 4938 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Shisa3Q3UPR0 Szrd1-203ENSMUST00000102487 3244 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Shisa3Q3UPR0 Trim26-210ENSMUST00000179968 3203 ntAPPRIS ALT2 TSL 5 BASIC11.8□□□□□ -0.52
Shisa3Q3UPR0 Ydjc-202ENSMUST00000115702 1713 ntTSL 5 BASIC11.8□□□□□ -0.52
Shisa3Q3UPR0 Mypopos-202ENSMUST00000205975 2321 ntBASIC11.8□□□□□ -0.52
Shisa3Q3UPR0 Klk10-201ENSMUST00000014058 1373 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Shisa3Q3UPR0 C130080G10Rik-203ENSMUST00000154140 1564 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Shisa3Q3UPR0 Ptpn7-203ENSMUST00000187985 1990 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
Shisa3Q3UPR0 Ripor3-201ENSMUST00000099073 3580 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Shisa3Q3UPR0 Olfr1372-ps1-202ENSMUST00000203403 9812 ntTSL 5 BASIC11.79□□□□□ -0.52
Shisa3Q3UPR0 Lrrc8e-201ENSMUST00000053035 3878 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Shisa3Q3UPR0 Pcdhgb1-201ENSMUST00000192931 4723 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Shisa3Q3UPR0 Pcdhga9-201ENSMUST00000091935 4724 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Shisa3Q3UPR0 2310022A10Rik-204ENSMUST00000187032 1871 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Shisa3Q3UPR0 Fhl4-202ENSMUST00000216889 1860 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Shisa3Q3UPR0 Bscl2-203ENSMUST00000159634 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Shisa3Q3UPR0 Bend7-201ENSMUST00000056914 2302 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
Shisa3Q3UPR0 Erlin1-206ENSMUST00000170801 3172 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Shisa3Q3UPR0 Etfrf1-204ENSMUST00000111723 842 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
Shisa3Q3UPR0 Gm14342-201ENSMUST00000137629 2119 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Shisa3Q3UPR0 Gm17613-201ENSMUST00000138893 669 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Shisa3Q3UPR0 Tmem262-201ENSMUST00000143303 545 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Shisa3Q3UPR0 Mpped1-210ENSMUST00000172115 795 ntTSL 3 BASIC11.79□□□□□ -0.52
Shisa3Q3UPR0 Mpped1-211ENSMUST00000172398 795 ntTSL 3 BASIC11.79□□□□□ -0.52
Shisa3Q3UPR0 Mir6990-201ENSMUST00000183724 91 ntBASIC11.79□□□□□ -0.52
Shisa3Q3UPR0 Olfr812-202ENSMUST00000203571 1232 ntAPPRIS P1 TSL 3 BASIC11.79□□□□□ -0.52
Shisa3Q3UPR0 Ate1-202ENSMUST00000035458 4685 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Shisa3Q3UPR0 Rnf138rt1-201ENSMUST00000059320 1191 ntAPPRIS P1 BASIC11.79□□□□□ -0.52
Shisa3Q3UPR0 Atp2a3-203ENSMUST00000108485 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Shisa3Q3UPR0 Atp2a3-204ENSMUST00000108486 4540 ntAPPRIS ALT2 TSL 5 BASIC11.79□□□□□ -0.52
Shisa3Q3UPR0 Zfp57-201ENSMUST00000069250 1749 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
Shisa3Q3UPR0 Cd80-201ENSMUST00000099816 1701 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Shisa3Q3UPR0 Cnot3-201ENSMUST00000038913 2822 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Shisa3Q3UPR0 4921504A21Rik-201ENSMUST00000180594 2156 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Shisa3Q3UPR0 Mfsd14b-201ENSMUST00000054730 3251 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
Shisa3Q3UPR0 Grin2a-202ENSMUST00000115835 5023 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
Shisa3Q3UPR0 Col1a2-201ENSMUST00000031668 5348 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Shisa3Q3UPR0 Zkscan14-203ENSMUST00000198959 2243 ntBASIC11.79□□□□□ -0.52
Shisa3Q3UPR0 Ttc25-202ENSMUST00000092684 2240 ntAPPRIS P2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Shisa3Q3UPR0 Aldh6a1-201ENSMUST00000085192 3399 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Shisa3Q3UPR0 Mrgprh-201ENSMUST00000075296 1809 ntAPPRIS P1 BASIC11.79□□□□□ -0.52
Shisa3Q3UPR0 Capg-203ENSMUST00000114072 1388 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Shisa3Q3UPR0 Aanat-205ENSMUST00000153476 1353 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Shisa3Q3UPR0 Arfgap1-214ENSMUST00000185115 1393 ntAPPRIS ALT2 TSL 5 BASIC11.79□□□□□ -0.52
Shisa3Q3UPR0 Mib1-205ENSMUST00000165555 3216 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Shisa3Q3UPR0 Map2k6-202ENSMUST00000100260 2088 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Shisa3Q3UPR0 Gm26651-201ENSMUST00000181851 2325 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Shisa3Q3UPR0 Cplx2-201ENSMUST00000026985 4928 ntAPPRIS P1 TSL 2 BASIC11.78□□□□□ -0.52
Shisa3Q3UPR0 Rlbp1-201ENSMUST00000053718 2134 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Shisa3Q3UPR0 Pafah1b1-202ENSMUST00000102520 5789 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Shisa3Q3UPR0 Tnfaip8-207ENSMUST00000148159 1921 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Shisa3Q3UPR0 Afap1l1-201ENSMUST00000120472 3444 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Shisa3Q3UPR0 Abhd14b-201ENSMUST00000048527 1745 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Shisa3Q3UPR0 F2-202ENSMUST00000111335 1969 ntAPPRIS ALT2 TSL 5 BASIC11.78□□□□□ -0.52
Shisa3Q3UPR0 Gm17435-202ENSMUST00000212699 1998 ntBASIC11.78□□□□□ -0.52
Shisa3Q3UPR0 Astl-204ENSMUST00000179618 2236 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
Shisa3Q3UPR0 Zfyve28-201ENSMUST00000094868 3983 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Shisa3Q3UPR0 Hdac7-202ENSMUST00000088402 4223 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
Shisa3Q3UPR0 Fam49b-201ENSMUST00000063838 3797 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Shisa3Q3UPR0 Spock3-201ENSMUST00000093480 3024 ntAPPRIS P3 TSL 5 BASIC11.78□□□□□ -0.52
Shisa3Q3UPR0 Kifc1-201ENSMUST00000114361 2260 ntAPPRIS ALT2 TSL 5 BASIC11.78□□□□□ -0.52
Shisa3Q3UPR0 Ap3s1-201ENSMUST00000025357 1520 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Shisa3Q3UPR0 Ssc5d-201ENSMUST00000057612 4348 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Shisa3Q3UPR0 Dhdds-202ENSMUST00000105885 998 ntTSL 5 BASIC11.78□□□□□ -0.52
Shisa3Q3UPR0 Rph3al-203ENSMUST00000108420 695 ntTSL 3 BASIC11.78□□□□□ -0.52
Shisa3Q3UPR0 Pex11g-202ENSMUST00000111081 666 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Shisa3Q3UPR0 Gm14701-201ENSMUST00000117156 348 ntBASIC11.78□□□□□ -0.52
Shisa3Q3UPR0 Vmn1r207-ps-201ENSMUST00000119931 1073 ntBASIC11.78□□□□□ -0.52
Shisa3Q3UPR0 Gm5678-201ENSMUST00000120115 939 ntAPPRIS P1 TSL 5 BASIC11.78□□□□□ -0.52
Shisa3Q3UPR0 Il4-203ENSMUST00000140684 530 ntTSL 2 BASIC11.78□□□□□ -0.52
Shisa3Q3UPR0 Gm11788-201ENSMUST00000142520 562 ntTSL 3 BASIC11.78□□□□□ -0.52
Shisa3Q3UPR0 Crem-221ENSMUST00000142690 1256 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Shisa3Q3UPR0 Il4-204ENSMUST00000150568 605 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Shisa3Q3UPR0 Nnat-209ENSMUST00000173793 386 ntTSL 5 BASIC11.78□□□□□ -0.52
Shisa3Q3UPR0 2900092O11Rik-201ENSMUST00000191770 755 ntBASIC11.78□□□□□ -0.52
Shisa3Q3UPR0 Gm30684-201ENSMUST00000205632 600 ntTSL 3 BASIC11.78□□□□□ -0.52
Shisa3Q3UPR0 Mobp-207ENSMUST00000215512 498 ntTSL 2 BASIC11.78□□□□□ -0.52
Shisa3Q3UPR0 Sbk2-201ENSMUST00000032598 1139 ntAPPRIS P1 TSL 3 BASIC11.78□□□□□ -0.52
Shisa3Q3UPR0 Atp6v0b-201ENSMUST00000036380 1000 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Shisa3Q3UPR0 Prr9-201ENSMUST00000070284 1183 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Shisa3Q3UPR0 Il4-201ENSMUST00000000889 590 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Shisa3Q3UPR0 Eif4g3-203ENSMUST00000084215 8134 ntAPPRIS ALT2 TSL 5 BASIC11.78□□□□□ -0.52
Shisa3Q3UPR0 Eif4g1-205ENSMUST00000115461 5507 ntAPPRIS ALT2 TSL 5 BASIC11.78□□□□□ -0.52
Shisa3Q3UPR0 Aptx-201ENSMUST00000030119 5250 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Shisa3Q3UPR0 Pik3c2b-201ENSMUST00000077730 7928 ntAPPRIS P1 TSL 5 BASIC11.78□□□□□ -0.52
Shisa3Q3UPR0 Gm8775-201ENSMUST00000170943 1327 ntBASIC11.78□□□□□ -0.52
Shisa3Q3UPR0 Pik3r6-202ENSMUST00000102613 3225 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
Shisa3Q3UPR0 Baiap2l1-201ENSMUST00000055190 3247 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Shisa3Q3UPR0 Fosb-207ENSMUST00000208505 3523 ntTSL 5 BASIC11.78□□□□□ -0.52
Shisa3Q3UPR0 AC164107.1-201ENSMUST00000227730 2161 ntBASIC11.78□□□□□ -0.52
Shisa3Q3UPR0 Sgk3-201ENSMUST00000097826 2728 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Shisa3Q3UPR0 Tspan32-206ENSMUST00000105925 1376 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Shisa3Q3UPR0 Coq6-203ENSMUST00000110278 1354 ntAPPRIS ALT2 TSL 5 BASIC11.78□□□□□ -0.52
Shisa3Q3UPR0 Abi2-201ENSMUST00000052332 5768 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Shisa3Q3UPR0 Atxn2l-201ENSMUST00000040202 3853 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
Shisa3Q3UPR0 Dagla-201ENSMUST00000039327 5634 ntAPPRIS P1 TSL 5 BASIC11.78□□□□□ -0.52
Shisa3Q3UPR0 Grin1-204ENSMUST00000114310 4276 ntTSL 5 BASIC11.77□□□□□ -0.52
Shisa3Q3UPR0 Rtp3-201ENSMUST00000084922 1425 ntAPPRIS P1 TSL 5 BASIC11.77□□□□□ -0.52
Shisa3Q3UPR0 Tsc2-221ENSMUST00000228412 5432 ntAPPRIS ALT2 BASIC11.77□□□□□ -0.52
Shisa3Q3UPR0 Rbmx2-201ENSMUST00000033433 1747 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 32.8 ms