Protein–RNA interactions for Protein: Q3UP24

Nlrc4, NLR family CARD domain-containing protein 4, mousemouse

Predictions only

Length 1,024 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nlrc4Q3UP24 Mkrn1-201ENSMUST00000031985 3046 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
Nlrc4Q3UP24 Hnrnpm-202ENSMUST00000114385 2550 ntTSL 2 BASIC14.36□□□□□ -0.11
Nlrc4Q3UP24 Syt1-201ENSMUST00000064054 4745 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Nlrc4Q3UP24 Slc13a3-201ENSMUST00000029208 3524 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Nlrc4Q3UP24 Zfp219-201ENSMUST00000067549 2933 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Nlrc4Q3UP24 Ddx42-201ENSMUST00000021046 4011 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Nlrc4Q3UP24 Unc5d-204ENSMUST00000210785 3404 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Nlrc4Q3UP24 Gm10125-203ENSMUST00000161096 3493 ntTSL 3 BASIC14.36□□□□□ -0.11
Nlrc4Q3UP24 Pop7-202ENSMUST00000111035 988 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
Nlrc4Q3UP24 Gm12416-201ENSMUST00000120911 1008 ntBASIC14.36□□□□□ -0.11
Nlrc4Q3UP24 Gm12091-201ENSMUST00000146791 830 ntBASIC14.36□□□□□ -0.11
Nlrc4Q3UP24 Gm5069-202ENSMUST00000192714 1011 ntBASIC14.36□□□□□ -0.11
Nlrc4Q3UP24 Gm8515-201ENSMUST00000194852 576 ntBASIC14.36□□□□□ -0.11
Nlrc4Q3UP24 Ociad1-210ENSMUST00000202250 800 ntTSL 2 BASIC14.36□□□□□ -0.11
Nlrc4Q3UP24 Il13-201ENSMUST00000020650 1205 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Nlrc4Q3UP24 Gm4129-201ENSMUST00000220083 625 ntTSL 3 BASIC14.36□□□□□ -0.11
Nlrc4Q3UP24 AC124510.1-201ENSMUST00000222659 583 ntTSL 5 BASIC14.36□□□□□ -0.11
Nlrc4Q3UP24 Msgn1-201ENSMUST00000049877 613 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
Nlrc4Q3UP24 Upk3bl-201ENSMUST00000006303 1045 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Nlrc4Q3UP24 Slc52a3-202ENSMUST00000109858 2094 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Nlrc4Q3UP24 Slc37a1-201ENSMUST00000165149 3354 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Nlrc4Q3UP24 Trp53-203ENSMUST00000108658 1771 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
Nlrc4Q3UP24 Trp53-201ENSMUST00000005371 1772 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Nlrc4Q3UP24 F830212C03Rik-201ENSMUST00000191701 2285 ntBASIC14.36□□□□□ -0.11
Nlrc4Q3UP24 Zfp467-205ENSMUST00000114560 3266 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Nlrc4Q3UP24 Col25a1-201ENSMUST00000080335 2624 ntAPPRIS P4 TSL 5 BASIC14.36□□□□□ -0.11
Nlrc4Q3UP24 Slc35c2-202ENSMUST00000109298 1991 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Nlrc4Q3UP24 Zfp574-202ENSMUST00000179556 4140 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Nlrc4Q3UP24 Ttc5-201ENSMUST00000006451 1842 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Nlrc4Q3UP24 H3f3b-202ENSMUST00000106454 2514 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
Nlrc4Q3UP24 Il17rd-203ENSMUST00000225146 3366 ntBASIC14.36□□□□□ -0.11
Nlrc4Q3UP24 Haus7-201ENSMUST00000033737 1380 ntAPPRIS P4 TSL 1 (best) BASIC14.35□□□□□ -0.11
Nlrc4Q3UP24 Tex19.1-201ENSMUST00000039088 1745 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Nlrc4Q3UP24 Cpne4-201ENSMUST00000057742 3959 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Nlrc4Q3UP24 Hcn3-201ENSMUST00000029686 4002 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Nlrc4Q3UP24 Sall2-202ENSMUST00000135523 4773 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Nlrc4Q3UP24 Apol7a-201ENSMUST00000010745 1431 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Nlrc4Q3UP24 Cct3-ps1-201ENSMUST00000118023 1647 ntBASIC14.35□□□□□ -0.11
Nlrc4Q3UP24 Noct-201ENSMUST00000023849 3059 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Nlrc4Q3UP24 Plod1-202ENSMUST00000105712 1059 ntTSL 2 BASIC14.35□□□□□ -0.11
Nlrc4Q3UP24 Tmem53-202ENSMUST00000106433 913 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Nlrc4Q3UP24 Gm12537-201ENSMUST00000119266 1002 ntBASIC14.35□□□□□ -0.11
Nlrc4Q3UP24 Gm12070-201ENSMUST00000119551 1002 ntBASIC14.35□□□□□ -0.11
Nlrc4Q3UP24 Gm12671-201ENSMUST00000119978 1002 ntBASIC14.35□□□□□ -0.11
Nlrc4Q3UP24 Gm13292-201ENSMUST00000120014 1000 ntBASIC14.35□□□□□ -0.11
Nlrc4Q3UP24 Gm12403-201ENSMUST00000121384 959 ntBASIC14.35□□□□□ -0.11
Nlrc4Q3UP24 Gm14224-201ENSMUST00000147187 864 ntTSL 3 BASIC14.35□□□□□ -0.11
Nlrc4Q3UP24 Stk19-ps1-201ENSMUST00000174597 517 ntBASIC14.35□□□□□ -0.11
Nlrc4Q3UP24 Gm10359-201ENSMUST00000180167 1002 ntBASIC14.35□□□□□ -0.11
Nlrc4Q3UP24 Gm12033-201ENSMUST00000180654 1002 ntBASIC14.35□□□□□ -0.11
Nlrc4Q3UP24 Gm5559-201ENSMUST00000180755 1002 ntBASIC14.35□□□□□ -0.11
Nlrc4Q3UP24 Gm4335-201ENSMUST00000182581 1004 ntBASIC14.35□□□□□ -0.11
Nlrc4Q3UP24 Poc1a-205ENSMUST00000191434 1242 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Nlrc4Q3UP24 Gm6745-201ENSMUST00000199216 526 ntBASIC14.35□□□□□ -0.11
Nlrc4Q3UP24 Gm9908-201ENSMUST00000211534 448 ntBASIC14.35□□□□□ -0.11
Nlrc4Q3UP24 AC162801.1-201ENSMUST00000220612 198 ntBASIC14.35□□□□□ -0.11
Nlrc4Q3UP24 Gm17330-201ENSMUST00000221047 165 ntBASIC14.35□□□□□ -0.11
Nlrc4Q3UP24 2610528J11Rik-201ENSMUST00000030261 958 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Nlrc4Q3UP24 Swi5-201ENSMUST00000050410 775 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Nlrc4Q3UP24 AU040320-201ENSMUST00000047431 4384 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Nlrc4Q3UP24 Asb3-206ENSMUST00000203878 1813 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
Nlrc4Q3UP24 Suv39h1-203ENSMUST00000115638 3116 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Nlrc4Q3UP24 Dbndd1-203ENSMUST00000177240 1463 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Nlrc4Q3UP24 Gtf2ird1-205ENSMUST00000100654 3156 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Nlrc4Q3UP24 Gm11978-202ENSMUST00000127510 1303 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Nlrc4Q3UP24 1110028F18Rik-201ENSMUST00000183365 1341 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Nlrc4Q3UP24 Klk8-201ENSMUST00000085461 1322 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Nlrc4Q3UP24 Gpr137b-202ENSMUST00000220628 3634 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Nlrc4Q3UP24 Synm-202ENSMUST00000074233 7818 ntAPPRIS P4 TSL 1 (best) BASIC14.35□□□□□ -0.11
Nlrc4Q3UP24 Tcirg1-201ENSMUST00000001801 2688 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Nlrc4Q3UP24 Hsph1-211ENSMUST00000202361 3802 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Nlrc4Q3UP24 Tbl1xr1-203ENSMUST00000193734 8237 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Nlrc4Q3UP24 AC139350.1-201ENSMUST00000227064 1594 ntBASIC14.34□□□□□ -0.11
Nlrc4Q3UP24 Igsf5-202ENSMUST00000081093 1554 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Nlrc4Q3UP24 Btrc-201ENSMUST00000065601 2978 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
Nlrc4Q3UP24 Matn3-201ENSMUST00000020899 3014 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Nlrc4Q3UP24 Gucy1a2-201ENSMUST00000115733 2243 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
Nlrc4Q3UP24 Rxrg-202ENSMUST00000111380 1630 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Nlrc4Q3UP24 Naaa-202ENSMUST00000159345 1629 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Nlrc4Q3UP24 Rtp3-201ENSMUST00000084922 1425 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Nlrc4Q3UP24 Tfap2a-202ENSMUST00000110193 2863 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
Nlrc4Q3UP24 Gtf3c5-202ENSMUST00000113889 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Nlrc4Q3UP24 Tcf3-205ENSMUST00000105341 2451 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
Nlrc4Q3UP24 Ell3-202ENSMUST00000116432 1674 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Nlrc4Q3UP24 Nob1-201ENSMUST00000003946 1658 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Nlrc4Q3UP24 Cd63-202ENSMUST00000105229 1043 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Nlrc4Q3UP24 Gm12138-201ENSMUST00000122180 951 ntBASIC14.34□□□□□ -0.11
Nlrc4Q3UP24 Rab15-204ENSMUST00000122419 856 ntTSL 5 BASIC14.34□□□□□ -0.11
Nlrc4Q3UP24 Gm28050-201ENSMUST00000124394 449 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Nlrc4Q3UP24 Smyd3-207ENSMUST00000194237 1047 ntTSL 2 BASIC14.34□□□□□ -0.11
Nlrc4Q3UP24 4930449I04Rik-201ENSMUST00000198191 1123 ntBASIC14.34□□□□□ -0.11
Nlrc4Q3UP24 Gm9794-201ENSMUST00000202370 423 ntBASIC14.34□□□□□ -0.11
Nlrc4Q3UP24 Cd63-204ENSMUST00000219317 1109 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Nlrc4Q3UP24 Gm7446-201ENSMUST00000221035 1240 ntBASIC14.34□□□□□ -0.11
Nlrc4Q3UP24 Mzt2-201ENSMUST00000023351 1035 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Nlrc4Q3UP24 Socs3-201ENSMUST00000054002 2552 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Nlrc4Q3UP24 Dagla-201ENSMUST00000039327 5634 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Nlrc4Q3UP24 Kmt5c-203ENSMUST00000108583 2177 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Nlrc4Q3UP24 Gm9115-201ENSMUST00000120192 1348 ntBASIC14.34□□□□□ -0.11
Nlrc4Q3UP24 Synj1-203ENSMUST00000121759 7090 ntAPPRIS P4 TSL 5 BASIC14.34□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 37.3 ms