Protein–RNA interactions for Protein: Q3UAW9

Brf2, Transcription factor IIIB 50 kDa subunit, mousemouse

Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Brf2Q3UAW9 Gm4875-201ENSMUST00000118257 786 ntBASIC12.86□□□□□ -0.35
Brf2Q3UAW9 Cox16-206ENSMUST00000168463 431 ntTSL 2 BASIC12.86□□□□□ -0.35
Brf2Q3UAW9 1010001B22Rik-201ENSMUST00000181488 589 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Brf2Q3UAW9 Gm26808-201ENSMUST00000181569 411 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Brf2Q3UAW9 Gm37596-201ENSMUST00000193565 1021 ntAPPRIS P1 BASIC12.86□□□□□ -0.35
Brf2Q3UAW9 Agrp-202ENSMUST00000194091 734 ntAPPRIS P1 TSL 2 BASIC12.86□□□□□ -0.35
Brf2Q3UAW9 Gm7775-201ENSMUST00000218871 853 ntBASIC12.86□□□□□ -0.35
Brf2Q3UAW9 Gm9063-201ENSMUST00000223299 582 ntBASIC12.86□□□□□ -0.35
Brf2Q3UAW9 AC131997.1-201ENSMUST00000228611 1229 ntBASIC12.86□□□□□ -0.35
Brf2Q3UAW9 Aspdh-201ENSMUST00000035929 1017 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Brf2Q3UAW9 Olfr975-201ENSMUST00000054067 933 ntAPPRIS P1 BASIC12.86□□□□□ -0.35
Brf2Q3UAW9 Gm8225-201ENSMUST00000090257 879 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Brf2Q3UAW9 Ilvbl-203ENSMUST00000218215 2331 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Brf2Q3UAW9 Usp16-202ENSMUST00000119504 2562 ntTSL 5 BASIC12.86□□□□□ -0.35
Brf2Q3UAW9 Gatd1-201ENSMUST00000106008 1898 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Brf2Q3UAW9 Asb10-202ENSMUST00000117900 1432 ntTSL 5 BASIC12.86□□□□□ -0.35
Brf2Q3UAW9 Tbx3-203ENSMUST00000121021 4777 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Brf2Q3UAW9 Ttc8-202ENSMUST00000085109 2272 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Brf2Q3UAW9 Srrm1-202ENSMUST00000084846 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Brf2Q3UAW9 Matn2-206ENSMUST00000228570 2798 ntBASIC12.86□□□□□ -0.35
Brf2Q3UAW9 March8-213ENSMUST00000203193 4245 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Brf2Q3UAW9 Kmt5c-203ENSMUST00000108583 2177 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Brf2Q3UAW9 Myh14-203ENSMUST00000107900 6400 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
Brf2Q3UAW9 Ccdc85a-204ENSMUST00000109502 5220 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Brf2Q3UAW9 Slc52a3-201ENSMUST00000073228 2669 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Brf2Q3UAW9 Trim52-201ENSMUST00000022708 3075 ntAPPRIS P1 BASIC12.85□□□□□ -0.35
Brf2Q3UAW9 Hnrnph2-201ENSMUST00000050331 1701 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
Brf2Q3UAW9 Hoxc4-201ENSMUST00000100164 1983 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Brf2Q3UAW9 Myt1l-204ENSMUST00000218198 2735 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Brf2Q3UAW9 Btrc-201ENSMUST00000065601 2978 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
Brf2Q3UAW9 Chtop-205ENSMUST00000107343 3118 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Brf2Q3UAW9 Map2k7-203ENSMUST00000110994 1600 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Brf2Q3UAW9 Dysf-213ENSMUST00000203803 6590 ntTSL 5 BASIC12.85□□□□□ -0.35
Brf2Q3UAW9 Spata5-209ENSMUST00000198968 2916 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Brf2Q3UAW9 Gm11723-201ENSMUST00000155505 466 ntTSL 3 BASIC12.85□□□□□ -0.35
Brf2Q3UAW9 Gm17399-201ENSMUST00000181824 1181 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Brf2Q3UAW9 Mir6956-201ENSMUST00000183598 62 ntBASIC12.85□□□□□ -0.35
Brf2Q3UAW9 Gm7390-201ENSMUST00000212452 1216 ntBASIC12.85□□□□□ -0.35
Brf2Q3UAW9 Pim2-204ENSMUST00000223553 1113 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Brf2Q3UAW9 AC154595.3-201ENSMUST00000224579 384 ntBASIC12.85□□□□□ -0.35
Brf2Q3UAW9 Calml4-201ENSMUST00000034777 864 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Brf2Q3UAW9 Prtn3-201ENSMUST00000006679 1025 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Brf2Q3UAW9 Bach2-202ENSMUST00000108180 8882 ntAPPRIS P2 TSL 5 BASIC12.85□□□□□ -0.35
Brf2Q3UAW9 2900097C17Rik-202ENSMUST00000192863 4915 ntBASIC12.85□□□□□ -0.35
Brf2Q3UAW9 Men1-202ENSMUST00000078137 2738 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Brf2Q3UAW9 Ces2f-201ENSMUST00000076384 1823 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Brf2Q3UAW9 Mob3c-201ENSMUST00000030477 2884 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Brf2Q3UAW9 Spo11-202ENSMUST00000109125 1591 ntAPPRIS ALT1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Brf2Q3UAW9 Grm2-201ENSMUST00000023959 4711 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
Brf2Q3UAW9 Rasgef1c-202ENSMUST00000093141 2120 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Brf2Q3UAW9 Specc1-209ENSMUST00000201671 2523 ntTSL 5 BASIC12.85□□□□□ -0.35
Brf2Q3UAW9 Eml3-201ENSMUST00000096241 3322 ntAPPRIS P2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Brf2Q3UAW9 Gtf3c5-202ENSMUST00000113889 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Brf2Q3UAW9 Cmip-201ENSMUST00000095172 2276 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Brf2Q3UAW9 Klk7-201ENSMUST00000032955 1895 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Brf2Q3UAW9 Itga6-202ENSMUST00000112101 4156 ntAPPRIS ALT1 TSL 5 BASIC12.84□□□□□ -0.35
Brf2Q3UAW9 Proser1-201ENSMUST00000058577 4472 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Brf2Q3UAW9 Stau2-215ENSMUST00000162435 2735 ntTSL 5 BASIC12.84□□□□□ -0.35
Brf2Q3UAW9 Dhtkd1-202ENSMUST00000095147 5480 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
Brf2Q3UAW9 Pax6-201ENSMUST00000090391 2869 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
Brf2Q3UAW9 Taco1-201ENSMUST00000002048 1383 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Brf2Q3UAW9 2310007B03Rik-202ENSMUST00000143419 2074 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Brf2Q3UAW9 Ap2a1-202ENSMUST00000107857 3301 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Brf2Q3UAW9 Ero1lb-202ENSMUST00000220811 3341 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Brf2Q3UAW9 Ccdc92b-201ENSMUST00000100866 4002 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Brf2Q3UAW9 Ispd-205ENSMUST00000221895 4022 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Brf2Q3UAW9 Alx1-208ENSMUST00000219194 1695 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
Brf2Q3UAW9 Pik3cd-201ENSMUST00000038859 4905 ntAPPRIS ALT1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Brf2Q3UAW9 Sox11-201ENSMUST00000079063 8311 ntAPPRIS P1 BASIC12.84□□□□□ -0.35
Brf2Q3UAW9 Ppdpf-202ENSMUST00000108841 689 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Brf2Q3UAW9 Crip3-202ENSMUST00000113465 1035 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Brf2Q3UAW9 Mcfd2-202ENSMUST00000129616 813 ntAPPRIS P1 TSL 3 BASIC12.84□□□□□ -0.35
Brf2Q3UAW9 Gm15948-201ENSMUST00000150616 403 ntTSL 3 BASIC12.84□□□□□ -0.35
Brf2Q3UAW9 Mettl26-204ENSMUST00000169085 324 ntTSL 5 BASIC12.84□□□□□ -0.35
Brf2Q3UAW9 Gm43691-201ENSMUST00000196625 697 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Brf2Q3UAW9 AC154846.1-201ENSMUST00000226278 862 ntBASIC12.84□□□□□ -0.35
Brf2Q3UAW9 Mesp1-201ENSMUST00000032760 1275 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Brf2Q3UAW9 Rlbp1-201ENSMUST00000053718 2134 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Brf2Q3UAW9 Cmc2-201ENSMUST00000078589 523 ntTSL 2 BASIC12.84□□□□□ -0.35
Brf2Q3UAW9 Rtp3-201ENSMUST00000084922 1425 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
Brf2Q3UAW9 Nptn-206ENSMUST00000176557 1898 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Brf2Q3UAW9 Gm13848-201ENSMUST00000130777 2047 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Brf2Q3UAW9 Prkce-202ENSMUST00000097275 6254 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Brf2Q3UAW9 Tspyl1-201ENSMUST00000061372 3086 ntAPPRIS P1 BASIC12.84□□□□□ -0.35
Brf2Q3UAW9 Tdg-208ENSMUST00000151390 3502 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
Brf2Q3UAW9 Ckmt2-201ENSMUST00000022122 1486 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Brf2Q3UAW9 Mettl7a3-201ENSMUST00000075420 1618 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Brf2Q3UAW9 Cplx4-201ENSMUST00000025397 1751 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Brf2Q3UAW9 Trappc9-203ENSMUST00000168191 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Brf2Q3UAW9 Ano6-201ENSMUST00000071874 4927 ntAPPRIS P2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Brf2Q3UAW9 AC168058.1-201ENSMUST00000219521 2282 ntBASIC12.83□□□□□ -0.35
Brf2Q3UAW9 Micu1-202ENSMUST00000092508 2294 ntAPPRIS ALT1 TSL 1 (best) BASIC12.83□□□□□ -0.35
Brf2Q3UAW9 Mrgprh-201ENSMUST00000075296 1809 ntAPPRIS P1 BASIC12.83□□□□□ -0.35
Brf2Q3UAW9 Fggy-203ENSMUST00000107091 1395 ntTSL 5 BASIC12.83□□□□□ -0.36
Brf2Q3UAW9 Enpp6-202ENSMUST00000119686 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Brf2Q3UAW9 Csnk1e-202ENSMUST00000120859 1391 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Brf2Q3UAW9 Slc22a15-201ENSMUST00000106928 6573 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
Brf2Q3UAW9 Eif1ad-201ENSMUST00000025759 2469 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Brf2Q3UAW9 Plagl1-202ENSMUST00000121646 5260 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Brf2Q3UAW9 Gm996-204ENSMUST00000191602 4812 ntAPPRIS P1 TSL 2 BASIC12.83□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 55.4 ms